Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 167 5e-36 seq5 163 7e-35 seq4 163 7e-35 seq6 161 2e-34 seq1 158 3e-33 seq7 141 2e-28 seq8 138 3e-27 >seq3 Length=27950219 Score = 167 bits (184), Expect = 5e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || | ||| | || ||||| || ||||| ||||| || Sbjct 14806204 ATCCCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATCC 14806145 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || |||| ||| || || ||||||||||||||||| || || ||||||| || ||| Sbjct 14806144 GCAAGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGA 14806085 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| || || |||||||| ||||| ||||| || | ||| | || | || Sbjct 14806084 GGGATTCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATGGTGT-ATGAGCTCTC 14806026 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || |||||||||||||| || |||||||||||||| Sbjct 14806025 GACTTCTAGGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCAT 14805975 Score = 143 bits (158), Expect = 6e-29 Identities = 162/216 (75%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||| ||||| || || ||||| || || | ||||| | ||| || Sbjct 5226608 AAGAACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCCGCAAGAGTACGACCATC 5226667 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||||| ||||| || ||||| || || |||||||| || |||| |||||||||||||| Sbjct 5226668 CTCTAGCTGTTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGAGATTCCTTCTTTATC 5226727 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523 || ||||| ||||| || || || | ||| || ||| ||| ||||| ||||| || Sbjct 5226728 TTGGATCTTGGCTTTGACGTTGTCAATGGTGTCTGAGCT---TTCGACCTCGAGTGTTAT 5226784 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || ||||| ||||| || ||||| Sbjct 5226785 GGTTTTGCCAGTTAGGGTTTTCACAAAGATTTGCAT 5226820 Score = 127 bits (140), Expect = 5e-24 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || || || | ||| || |||||||||||||| || |||| || ||| | ||| ||| Sbjct 5226096 AGAACAAGGTGAAGTGTTGACTCTTTCTGAATATTGTAATCAGCTAAAGTCCGACCATCT 5226155 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 ||||| || || || |||| |||||||||||||| || || || || |||||||| || Sbjct 5226156 TCTAGCTGCTTCCCGACAAAGATTAGCCTCTGTTGGTCCGGTGGAATCCCTTCTTTGTCT 5226215 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 || |||||||| || || || || | ||||| || | |||||||| || ||||| || Sbjct 5226216 TGTATCTTTGCCTTCACGTTATCAATCGTATC-AGAGCTCTCTACCTCAAGAGTAATGGT 5226274 Query 104527 CTTACCAGT 104535 || || || Sbjct 5226275 TTTCCCTGT 5226283 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || || |||| | || | ||||| || || ||||| || Sbjct 5226852 GTTGACTCCTTTTGGATGTTGTAATCAGCCAAGGTACGGCCGTCCTCGAGCTGTTTACCG 5226911 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||| ||||| || ||||| ||||||||||| || || ||||| || || Sbjct 5226912 GCAAAGATAAGCCTTTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGGATCTTGGCATTG 5226971 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| ||||| ||| ||| ||||| ||||| || ||||| || ||||| ||| Sbjct 5226972 ACGTTTTCGACGGTGTCGGAGCTTTCGACCTCAAGTGTTATGGTCTTGCCCGTAAGAGTT 5227031 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 5227032 TTCACGAAGATTTGCAT 5227048 Score = 125 bits (138), Expect = 2e-23 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || ||||| | || || | ||| ||||| ||||||||||| Sbjct 14806384 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGTTGTTTTCCC 14806325 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| ||||||||||| || || ||||| || ||||| ||||| |||||||| ||||| Sbjct 14806324 GCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTTC 14806265 Query 104483 ACATTTTCTACGGTATC 104499 ||||| || | ||||| Sbjct 14806264 ACATTGTCAATTGTATC 14806248 Score = 86.0 bits (94), Expect = 1e-11 Identities = 138/195 (71%), Gaps = 5/195 (3%) Strand=Plus/Plus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 || ||||||| || ||| || |||| || ||| | ||| |||| ||| | |||||| Sbjct 5216938 GACTCTTTCTCAACATTGTAATCAGCTAAAGTCCAACCATCTTTTAGCTCACGCCCAGCA 5216997 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 | ||||| ||||||| | || | || ||||| |||||||||||||| | || ||| Sbjct 5216998 CAGGTTAGCTTCTGTTGGTACGGTAGGATCCCTTCCTTATCCTGAATCTTCGTCTTCACA 5217057 Query 104486 TTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544 | || | ||||| || | || ||||| || || || | | || ||||| ||||| Sbjct 5217058 CTGTCAATCGTATC-AGAGCTCTCGACCTCGAGAGTTATGG---TTCCTGTAAGAGTTTT 5217113 Query 104545 TACAAATATCTGCAT 104559 ||| || || ||||| Sbjct 5217114 TACGAAGATTTGCAT 5217128 >seq5 Length=22804910 Score = 163 bits (180), Expect = 7e-35 Identities = 585/897 (65%), Gaps = 27/897 (3%) Strand=Plus/Minus Query 268694 CCAGATAGATT-TGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACA 268752 ||||| ||||| ||| || |||||||| || | | || ||| |||||||| | Sbjct 2412900 CCAGACAGATTCTGT-ATGTTTCCAATTCACTACCCACAGATCTGGGAAATGTACAAGAA 2412842 Query 268753 GGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTG 268812 |||| || || || ||||| | |||||||||||||| || | ||| || || Sbjct 2412841 AGCCGAAGCATCATTCTGGACAGCCGAAGAAGTAGATCTCTCACAAGACAACCGTGACTG 2412782 Query 268813 GAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGT 268872 | ||||| | || | |||| | || || | | || || || || || | Sbjct 2412781 GGAAAATCTCAACGACGGAGAACGTCACTTCATCAAACACGTACTCGCTTTCTTCGCCGC 2412722 Query 268873 TAGTGATGGTATCGTTAACGAAAATCTAG-TAGAGAAGTTCTGTCAAGAGGTACAGATTC 268931 ||| || ||||| |||||| || | | | | | ||||| || ||||| | Sbjct 2412721 ATCTGACGGAATCGTACTCGAAAACCTCGCTTCACGATTCATGTCA-GATGTACAAGTCT 2412663 Query 268932 CTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGT 268991 | ||||| | || ||||||||||| || ||||| || ||||| ||||||||||||| Sbjct 2412662 CCGAAGCGCGTGCATTCTACGGATTCCAAATCGCTATTGAGAATATCCATTCAGAGATGT 2412603 Query 268992 ACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGA-CTATTTTCT 269050 | ||| | | || ||||| || | |||||||| |||| || | | ||||| | Sbjct 2412602 ATTCTCTTCTTCTCGACACTTACATCAAAGATAACAAAGAAA-GAGATCATCTATTCCGT 2412544 Query 269051 TCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAAC 269110 | || ||| || ||||| | || ||| || ||||||| ||| ||||| | Sbjct 2412543 GCAATCGAAACGATTCCTTGTGTTACCAAGAAAGCTTCATGGGCTATGACTTGGAT---C 2412487 Query 269111 GATAGCGCGC---CTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTC 269167 ||| | | | | | || ||| | | || || || || ||| |||||||||||| Sbjct 2412486 GATGGATCTCAAACATTCGCTGAACGTATCGTAGCGTTCGCTTGTGTTGAAGGTATATTC 2412427 Query 269168 TTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTA 269227 || || || || || | || || ||| | |||||| | || || ||||| || ||| Sbjct 2412426 TTCTCTGGTTCCTTCTGTTCGATTTTCTGGCTTAAGAAACGTGGACTCATGCCTGGTTTA 2412367 Query 269228 ACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTA 269287 ||||||||||||||||| || || ||||||||||||||||| || |||||||||| Sbjct 2412366 ACTTTCTCTAACGAATTAATCTCAAGAGACGAAGGTTTACACTGTGATTTCGCTTGTT-- 2412309 Query 269288 TTATTTACTAATTATCTTTCACACAAACCTT-CTCAAGATAGAGTATACGAAAT-TATAG 269345 | |||||| | | | || | || || ||| | | || ||||| ||| | ||| | Sbjct 2412308 TGATTTAC--ACTCTGTTACGTACCAAGCTTAGTGAGGAAAGAGT----GAAGTCTATTG 2412255 Query 269346 ATT---CAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTA 269402 || || ||| | || | ||| ||| || ||||| || || | | Sbjct 2412254 TTTGCGATGCGGTTGAGATTGAGAGAGAGTTTGTATGTGAAGCGCTTCCTTGTGCGTTGG 2412195 Query 269403 TCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCT-G 269461 | ||||||||| | ||| ||||| | |||||| |||| || | ||||| ||| | Sbjct 2412194 TTGGTATGAATGGTGAATTGATGAGTCAGTATATTGAGTTTGTTGCGGATAGGTTGTTAT 2412135 Query 269462 GTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAAT 269521 ||| | | |||| | ||||| ||| || ||||| ||| || |||||| Sbjct 2412134 GTG-CGCTTGGGTATGGTAAAGTGTATGGTGTGAGTAATCCTTTTGATTGGATGGAGTTG 2412076 Query 269522 ATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAA 269578 || ||| |||| ||| ||||||| || || ||| | || || | ||||||||| Sbjct 2412075 ATTAGTTTACAAGGGAAGACTAATTTTTTTGAAAAGAGAGTTGGTGATTATCAGAAA 2412019 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || ||||||||||| || || ||||||| ||||| | ||||| Sbjct 22133790 AAGGACAAGATGAAGCGTTGATTCTTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCGTC 22133731 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| |||||||||||||| || |||| | || || || || || |||||||| || || Sbjct 22133730 TTCGAGTTGTTTTCCAGCGAAGATTAAACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTC 22133671 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || ||||| ||||| ||||| || | |||||| | ||| ||||| || || || || Sbjct 22133670 TTGGATCTTGGCTTTGACATTGTCGATGGTATCTGATGATTCAACCTCGAGAGTGATTGT 22133611 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || ||||| || || |||||||| Sbjct 22133610 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 22133578 >seq4 Length=23266485 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | ||| || || | || | || ||||| ||||| || || ||||| Sbjct 5744576 ATACCACCTCTCAACCTGAGAACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCC 5744517 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| | ||| ||||| || ||||| || ||||| |||||||| ||||| |||||| Sbjct 5744516 GCAAGAGTACAACCATCTTCGAGCTGTTTACCCGCAAAGATTAGCCTTTGTTGGTCAGGA 5744457 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| |||||||| || || || || || | ||||| | || Sbjct 5744456 GGGATTCCTTCTTTATCTTGAATCTTCGCCTTGACGTTGTCAATTGTATCTGAACTCTCA 5744397 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| | |||||||| |||||||| ||||| || ||||| Sbjct 5744396 ACTTCTAGGGTAATGATTTTACCAGTGAGTGTTTTCACAAAGATTTGCAT 5744347 Score = 156 bits (172), Expect = 1e-32 Identities = 155/198 (78%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || ||||| | || ||| | ||| || |||||||||||||| Sbjct 5738659 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAAAGTCCGACCATCCTCTAGTTGTTTTCCG 5738600 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 | ||| |||||||||||||| || |||| |||||||| || || |||||||| || || Sbjct 5738599 GTAAAGATTAGCCTCTGTTGGTCCAGAGGGATTCCTTCCTTGTCTTGAATCTTCGCCTTG 5738540 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 | || || | || || || | || || ||||| |||||||| ||||||||||| || Sbjct 5738539 ATGTTGTCAATAGTGTC-TGAGCTCTCAACTTCTAGGGTAATAGTTTTACCAGTAAGCGT 5738481 Query 104542 TTTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 5738480 CTTGACAAATATCTGCAT 5738463 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || ||||| ||||| || || ||||||| ||||| | ||||| Sbjct 22703216 AAGGACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCAGCCAGAGTACGTCCGTC 22703275 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| ||||||||||| || || |||| | |||||||| || || |||||||| || || Sbjct 22703276 TTCGAGTTGTTTTCCGGCGAAGATTAATCGTTGTTGATCCGGTGGGATTCCTTCCTTGTC 22703335 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || ||||| || || ||||| || | |||||| | ||| ||||| || || || || Sbjct 22703336 TTGGATCTTGGCCTTGACATTGTCGATTGTATCGGATGATTCAACCTCGAGAGTGATCGT 22703395 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||| || || || ||||| || || |||||||| || Sbjct 22703396 CTTCCCTGTTAGGGTTTTCACGAAGATCTGCATCTT 22703431 Score = 132 bits (146), Expect = 1e-25 Identities = 112/138 (81%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| ||||| ||||| | || ||||| | ||||| |||||||| || || || |||| Sbjct 12669219 TTCCACCTCTAAGCCTCAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAG 12669160 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 || |||| ||| ||||| ||||| || ||||||||||| ||||||||||||||||| | Sbjct 12669159 CTAAGGTTCGACCATCTTCAAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGATCAGGTG 12669100 Query 104451 GTATTCCTTCTTTATCCT 104468 |||| |||||||| |||| Sbjct 12669099 GTATACCTTCTTTGTCCT 12669082 Score = 118 bits (130), Expect = 2e-21 Identities = 117/149 (79%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 104412 GTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAA 104471 ||||||| || ||||| |||| || || || || ||||| || ||||||||||| |||| Sbjct 5748391 GTTGTTTACCGGCAAAGATTAATCTTTGCTGGTCCGGAGGGATCCCTTCTTTATCTTGAA 5748332 Query 104472 TCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTA 104530 |||| ||||| ||||| || | |||||| || | || || ||||| ||||| || ||| Sbjct 5748331 TCTTCGCTTTAACATTGTCAATGGTATCTG-AGCTCTCAACTTCTAGGGTAATGGTTTTA 5748273 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | || |||||||||||||| Sbjct 5748272 CCCGTAAGCGCCTTGACAAATATCTGCAT 5748244 Score = 114 bits (126), Expect = 3e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || | || | ||| || || || | || || || || || || || ||||| | Sbjct 5744971 TTCCACCGCGTAAACGAAGGACAAGGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCCG 5744912 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||| | || || || || ||||| || ||||| || || |||| || || |||| Sbjct 5744911 CAAGAGTACGGCCATCCTCGAGCTGTTTACCCGCAAAGATAAGTCTCTTCTGTTCCGGAG 5744852 Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCT 104509 | || ||||| || || |||||||| ||||| ||||| || | ||| || || | || Sbjct 5744851 GGATCCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATGGTGTCTG-AGCTCTCA 5744793 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || ||| ||||| || || |||||||||||||| Sbjct 5744792 ACTTCTAGGGTAATGGTTTTATTGGTAAGCGTCTTGACAAATATCTGCAT 5744743 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 ||||| || || ||||||| || ||| | ||| ||||| |||||||||||||| || || Sbjct 13235794 TTCTGGATGTTGTAGTCAGCTAAAGTGCGACCATCTTCAAGTTGTTTTCCAGCGAATATC 13235735 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCT 104458 | |||||| ||||| ||||| |||||| Sbjct 13235734 AACCTCTGCTGATCCGGAGGGATTCCT 13235708 >seq6 Length=37079636 Score = 161 bits (178), Expect = 2e-34 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || | ||| | || ||||| |||||||| ||||| || Sbjct 33565313 ATCCCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATCC 33565254 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || |||| ||| || || ||||||||||||||||| || || |||||||| || ||| Sbjct 33565253 GCAAGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGA 33565194 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || || |||||||| || || || || || | ||| || || | || Sbjct 33565193 GGGATCCCTTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCAATGGTGTC-TGAGCTCTC 33565135 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| |||||||| |||||||| || ||||| ||||| |||||||| Sbjct 33565134 AACTTCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084 Score = 156 bits (172), Expect = 1e-32 Identities = 155/198 (78%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || ||||| | || || | ||| ||||| ||||||||||| Sbjct 33565508 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGTTGTTTTCCC 33565449 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| ||||||||||| || || ||||| || ||||| ||||| |||||||| ||||| Sbjct 33565448 GCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTTC 33565389 Query 104483 ACATTTTCTACGGTATCGCTAGGTT-CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||||| | || || | ||||| || || || ||||| || || | || Sbjct 33565388 ACATTGTCAATTGTATC-CGAGCTTTCGACCTCAAGAGTTATCGTCTTTCCCGTCAAAGT 33565330 Query 104542 TTTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 33565329 CTTGACAAATATCTGCAT 33565312 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | ||||| || ||||| || || ||||||| ||||| | | Sbjct 19970226 AGCCTGAGGACAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGA 19970285 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || ||||| ||||| ||||| || | |||||| ||||| ||||| ||||| || Sbjct 19970286 CCGTCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCC 19970345 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || || ||||| || || || || || | ||| || | || ||||| || ||| Sbjct 19970346 TTGTCTTGGATCTTAGCCTTAACGTTATCAATGGTGTCAGAACTCTCAACCTCGAGGGTA 19970405 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||||||||| | || || || || |||||||| Sbjct 19970406 ATAGTCTTACCAGTCAAGGTCTTAACGAAGATCTGCAT 19970443 Score = 149 bits (164), Expect = 1e-30 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | ||| || || | || | || ||||| ||||| || || || || Sbjct 33565085 ATACCTCCTCTCAACCTGAGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATCC 33565026 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| ||| || || || || || || ||||| || |||||||| || || ||| Sbjct 33565025 GCAAGAGTTCGACCATCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGA 33564966 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| || || ||||| || ||||| ||||| || | ||| || || | || Sbjct 33564965 GGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTGTCAATGGTGTCTG-AGCTCTC 33564907 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || |||||||||||||| || |||||||||| ||| Sbjct 33564906 GACTTCTAGGGTAATCGTTTTACCAGTAAGTGTCTTGACAAATATCTACAT 33564856 Score = 136 bits (150), Expect = 9e-27 Identities = 136/174 (78%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || ||||| | || || | ||| ||||| ||||||||||| Sbjct 33830075 GTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGTTGTTTTCCC 33830134 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| ||||||||||| || || ||||| || ||||| ||||| |||||||| ||||| Sbjct 33830135 GCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTTC 33830194 Query 104483 ACATTTTCTACGGTATCGCTAG-GTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| || | ||||| | || ||| ||||| || || || ||||| || || Sbjct 33830195 ACATTGTCAATTGTATC-CGAGCTTTCGACCTCAAGAGTTATCGTCTTTCCCGT 33830247 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| ||||| || || | | || | || ||||| | ||| || ||| Sbjct 13447135 GTTGATTCCTTCTGGATATTGTAATCCGCCAAGGTACGCCCATCTTCCAATTGCTTACCA 13447076 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | ||||| ||||| ||||| || ||||| |||||||||||||| ||||| Sbjct 13447075 GCGAAGATCAATCTCTGCTGATCCGGAGGAATCCCTTCCTTATCCTGAATCTTCGCTTTA 13447016 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||| | ||| ||||| || || || ||||| || || || ||| Sbjct 13447015 ACATTGTCGATCGTATCAGAACTTTCCACCTCGAGAGTGATTGTCTTTCCGGTGAGAGTT 13446956 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 13446955 TTCACAAAGATCTGCAT 13446939 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || ||||| | || || | ||| || || || || |||||| Sbjct 19969791 GTCGACTCCTTCTGAATGTTGTAGTCGGCTAAGGTCCGACCATCCTCAAGCTGCTTTCCA 19969850 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | ||| || || ||||| || |||||||| ||||| ||||| || || Sbjct 19969851 GCAAAAATGAGACGCTGCTGGTCCGGAGGGATCCCTTCTTTGTCCTGGATCTTGGCCTTG 19969910 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || || | || ||||| || ||||| ||||||||||| | || Sbjct 19969911 ACGTTGTCAATAGTGTC-TGAGCTCTCGACCTCGAGGGTAATGGTCTTACCAGTCAAGGT 19969969 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 19969970 CTTGACGAAGATCTGCAT 19969987 Score = 114 bits (126), Expect = 3e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || || |||||||| || || ||||||||||| ||||||| | ||| | ||| || || Sbjct 13448123 ACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAGCCAAAGTCCGACCATCCTCA 13448064 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || ||||| ||||| || || | ||| || || || || ||||| || || ||||| Sbjct 13448063 AGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGG 13448004 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTT 104529 ||||| || || ||||| || | || || || | || ||||| || || || ||||| Sbjct 13448003 ATCTTAGCCTTCACATTGTCAATTGTGTC-TGAGCTCTCCACCTCAAGAGTGATTGTCTT 13447945 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | || || || || |||||||| Sbjct 13447944 CCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915 Score = 113 bits (124), Expect = 1e-19 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || |||||||| || || || ||||| ||||||| | || | ||| || || || || Sbjct 13447889 TGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTACGACCATCCTCAAGCTGC 13447830 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 ||||| ||||| || | |||||| || || || || || ||||| ||||| || |||||| Sbjct 13447829 TTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGAATACCTTCCTTATCTTGGATCTTT 13447770 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGT 104535 || || || || || | || || || | || ||||| || ||||| ||||||||||| Sbjct 13447769 GCCTTCACGTTGTCAATAGTGTCAG-AGCTCTCCACCTCGAGAGTAATGGTCTTACCAGT 13447711 Query 104536 AAGTGTTTTTACAAATATCTGCAT 104559 | || || || || || ||||| Sbjct 13447710 CAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || || || | || || | ||| || || || || || ||| Sbjct 13448339 GTCGACTCTTTCTGAATGTTGTAATCCGCCAGTGTACGACCATCCTCAAGCTGCTTACCA 13448280 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || ||||| | ||| || || || || || ||||| |||||||| ||||| || || Sbjct 13448279 GCGAAGATTAGACGCTGCTGGTCCGGTGGAATACCTTCCTTATCCTGGATCTTGGCCTTC 13448220 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||||| || | || || || ||||| || ||||| || ||||| || Sbjct 13448219 ACGTTATCAATAGTATC-AGAGCTCTCAACTTCAAGTGTGATTGTCTTGCCGGTAAGAGT 13448161 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 13448160 CTTCACGAAAATCTGCAT 13448143 >seq1 Length=25238555 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||||| | || || | ||| | || ||||||||||| || | || |||| Sbjct 18011472 TCCTCCTCTTAATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGCTGTAATCAGC 18011413 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || ||||| |||||||||| ||||||||| ||||| || | | ||||| || || || Sbjct 18011412 GAGTGTTCTTCCGTCTTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGGTCCGGTGG 18011353 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 |||||||| || || |||||||| ||||| ||||| || | || || || ||| || Sbjct 18011352 AATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCAATTGTGTCTGAAGATTCAAC 18011293 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTT 104561 |||||| || || ||||| || || || ||||| ||||| |||||||||| Sbjct 18011292 CTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTT 18011243 Score = 111 bits (122), Expect = 4e-19 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || | ||| | || || ||||||||||| || ||||| | Sbjct 21980170 TTCCACCCCTAAGCCTCAAAACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAGTCCG 21980229 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||| || | ||| ||||| |||||||| |||||||| || | ||||||||||| || | Sbjct 21980230 CTAGTGTACGACCATCTTCAAGTTGTTTACCAGCAAAGATCAATCTCTGTTGATCTGGTG 21980289 Query 104451 GTATTCCTTCTTTATCCTG 104469 ||||||| ||||| ||||| Sbjct 21980290 GTATTCCCTCTTTGTCCTG 21980308 >seq7 Length=29178675 Score = 141 bits (156), Expect = 2e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | | || || | ||| | || ||||| ||||||||||| || || Sbjct 2571071 ATTCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCC 2571012 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||| ||| || || || ||||| |||||||| || |||||||||| || ||| Sbjct 2571011 CCAAGGGTTCGACCATCCTCGAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCTGGA 2570952 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| ||||| || ||||| || || || | || | | | || || | || Sbjct 2570951 GGGATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTC-TGAGCTCTC 2570893 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || |||| |||||||| |||||||| |||||||| |||||||| |||||| Sbjct 2570892 AACTTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCATT 2570841 >seq8 Length=40886855 Score = 138 bits (152), Expect = 3e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || | || | ||| || | ||| | || ||||| ||||| || || || || | Sbjct 1188618 TTCCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCG 1188677 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||| || || ||||| ||||| || || || || || || ||||| ||||| |||| Sbjct 1188678 CAAGAGTCCTTCCATCTTCAAGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAG 1188737 Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCT 104509 | || ||||| || ||||||||||| || || ||||| |||| || || || | || Sbjct 1188738 GAATCCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCTATTGTGTC-TGAGCTCTCC 1188796 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| || |||||||| || || || || ||||||||||| Sbjct 1188797 ACCTCAAGGGTAATGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 1188846 Score = 114 bits (126), Expect = 3e-20 Identities = 123/160 (77%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 104401 ACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTC 104460 ||| || ||||| || || || ||||| || |||||||| ||||| || || |||||||| Sbjct 1189669 ACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGGATTCCTTC 1189728 Query 104461 TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTG 104519 || ||||||||||| || || || || || | || || || | || ||||| | | Sbjct 1189729 CTTGTCCTGAATCTTAGCCTTGACGTTATCAATAGTGTC-TGAGCTCTCCACCTCCAAAG 1189787 Query 104520 TAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||||||||||||||| || || ||||| |||||||| Sbjct 1189788 TGATAGTCTTACCAGTAAGGGTCTTCACAAAGATCTGCAT 1189827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150988714098868