Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3 154 1e-32 seq8 149 6e-31 seq6 147 2e-30 seq7 127 2e-24 seq4 111 1e-19 seq1 86.0 6e-12 >seq3 Length=27950219 Score = 154 bits (170), Expect = 1e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||||||||| |||| |||||||| | ||| || |||||||| | ||| | Sbjct 5226814 TTTGCATACCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGT 5226873 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| || || | ||||| |||||||| ||| ||||||| | ||||| || | Sbjct 5226874 AATCAGCCAAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGT 5226933 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | ||||| || ||||||||||| | || || || |||||| |||| ||||| | | Sbjct 5226934 CCGGAGGGATTCCTTCTTTGTCTTGGATCTTGGCATTGACGTTTTCGACGGTGTCGGAGC 5226993 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| |||| || ||||| || || |||||||||||||| ||||| ||||| Sbjct 5226994 TTTCGACCTCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCAT 5227048 Score = 114 bits (126), Expect = 1e-20 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 || ||||||||||| | || ||||| | || || || || |||||| |||||||| | Sbjct 5226624 GTTGATTCCTTTTGGATATTGTAATC-CGCA-AGAGTACGACCATCCTCTAGCTGTTTAC 5226681 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || ||||||| | ||| || || || |||| || |||||||| || | || || || | Sbjct 5226682 CGGCAAAGATAAGTCTCTGTTGGTCCGGAGAGATTCCTTCTTTATCTTGGATCTTGGCTT 5226741 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 ||||| | | | ||||| | | ||||| || | || |||||||| ||||| || | Sbjct 5226742 TGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGG 5226801 Query 94989 TTTTCACAAAGATCTGCAT 95007 ||||||||||||| ||||| Sbjct 5226802 TTTTCACAAAGATTTGCAT 5226820 >seq8 Length=40886855 Score = 149 bits (164), Expect = 6e-31 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || ||||||||||| | ||||||||||| || || ||||| || | || | Sbjct 1190049 TTTGCATACCACCTCTCAATCGGAGAACCAAGTGCAAGGTCGACTCCTTCTGGATATTGT 1190108 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | ||| | ||| | ||| || || || || || | ||||| | ||||||||||| Sbjct 1190109 AGTCGGCAAGAGTCCTTCCATCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGCTGAT 1190168 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | |||||||||||||| ||||| | || |||||||| || ||| |||||||| | Sbjct 1190169 CCGGAGGAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTATCGATAGTGTCAGAGC 1190228 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | || ||||| |||||||||||||||||||| || || ||||| Sbjct 1190229 TCTCGACCTCGAGAGTTATGGTCTTTCCAGTAAGAGTTTTCACGAATATTTGCAT 1190283 Score = 111 bits (122), Expect = 1e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || ||| ||||||| | || |||||||| || || || ||||| || Sbjct 1189672 ATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGGATTCCTTCCTT 1189731 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || ||||||||| | | |||||| | | || || || | ||||| Sbjct 1189732 GTCCTGAATCTTAGCCTTGACGTTATCAATAGTGTCTGAGCTCTCCACCTCCAAAGTGAT 1189791 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || |||||||| || ||||||||||||||||| Sbjct 1189792 AGTCTTACCAGTAAGGGTCTTCACAAAGATCTGCAT 1189827 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| || | ||| | || || || || || | ||| ||||| | ||| | | Sbjct 1189841 CGCAAGACAAGGTGGAGTGTGGACTCTTTCTGGATGTTGTAATCCGCAAGAGTCCTTCCA 1189900 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||| || || | ||||| | |||||||||||| |||||||| || |||||| Sbjct 1189901 TCTTCAAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGAATTCCCTCTTTG 1189960 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || |||||||| | | ||| || | | || || |||| || ||| Sbjct 1189961 TCCTGGATCTTAGCCTTGACATTATCAATAGTATCGGAGCTTTCAACCTCAAGAGTAATG 1190020 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || | ||| || |||||||| ||||| Sbjct 1190021 GTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 1190055 >seq6 Length=37079636 Score = 147 bits (162), Expect = 2e-30 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| || | |||||| |||| || |||||||| || | ||||||||| | | Sbjct 33565310 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATC-CGC 33565252 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || ||| || |||||| || |||||||| ||||||| | ||| || || || |||| Sbjct 33565251 A-AGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGAG 33565193 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || ||||| ||||| | ||| || ||||||||| | | | ||||| | | || | Sbjct 33565192 GGATCCCTTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAA 33565133 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || ||||| ||||| || |||||||||||||||||||| Sbjct 33565132 CTTCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | |||||| ||||| || | ||| || || || |||| |||||| Sbjct 19969551 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCA 19969610 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| || | ||||||| | ||||| || || || |||||||| ||||| | Sbjct 19969611 AGCTGTTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGGATACCTTCCTTGTCCTGG 19969670 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || |||||||| | | | ||||||| | ||||| |||| |||||||| ||| Sbjct 19969671 ATCTTAGCCTTGACATTGTCAATTGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTTT 19969730 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| ||||| || |||||||| Sbjct 19969731 CCAGTAAGAGTCTTCACGAAAATCTGCAT 19969759 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||||||||| || | |||||| || || || | || || ||| || ||| || Sbjct 19970001 CGCAACACCAAATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGCCAGAGTTCTGCCG 19970060 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || || |||||| | || || ||||||||||| || ||||||||||| |||||| Sbjct 19970061 TCCTCGAGTTGCTTTCCGGCGAAAATCAATCTTTGCTGGTCCGGAGGAATACCCTCTTTG 19970120 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| ||||||||| | | | ||||| | | || || || | |||||| Sbjct 19970121 TCCTGGATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAACTTCCAAGGTGATG 19970180 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || || |||||||||||||| Sbjct 19970181 GTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 19970215 Score = 129 bits (142), Expect = 5e-25 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 ||||||||||||||||| ||||| |||||||| | || || || || || || || Sbjct 13447901 CGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCCA-AG-GTACGAC 13447844 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||| ||||| |||||| ||||||| || || ||||| || || ||||||||||| | Sbjct 13447843 CATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGAATACCTTCCT 13447784 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 | || | || |||||||| ||| | | | |||||||| | || || || | || | Sbjct 13447783 TATCTTGGATCTTTGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCCACCTCGAGAGTAA 13447724 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||| | || || || ||||| ||||| Sbjct 13447723 TGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||||||||| | | |||||||| | || |||||||| || | ||| ||||| | | Sbjct 33565082 CCTCCTCTCAACCTGAGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATC-CGC 33565024 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || ||| || |||||| ||||| || ||| ||||||| | || ||||| || |||| Sbjct 33565023 A-AGAGTTCGACCATCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAG 33564965 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || ||||| ||||| | |||||| || || || | | | ||||| | | |||| Sbjct 33564964 GGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCGA 33564905 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || ||||| |||||||| || || ||||| |||| ||| Sbjct 33564904 CTTCTAGGGTAATCGTTTTACCAGTAAGTGTCTTGACAAATATCTACAT 33564856 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| || ||||| || | || ||||| || || | ||| ||| Sbjct 19970463 ACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAATCCGCCAAGGTACGGCCATCTTCC 19970522 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| ||||| | ||||| ||||| |||||||| |||||||| || || || || | Sbjct 19970523 AACTGCTTTCCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATTCCCTCCTTATCTTGG 19970582 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | ||| ||||||| || || || | ||||| || ||| Sbjct 19970583 ATCTTAGCCTTAACGTTGTCGATCGTGTCAGAACTTTCCACCTCGAGGGTGATAGTCTTT 19970642 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||||||||||||||||||||| Sbjct 19970643 CCGGTGAGAGTTTTCACAAAGATCTGCAT 19970671 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||||||| | ||| |||||||| || | || ||||| || || | Sbjct 13447153 CGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATATTGTAATCCGCCAAGGTACGCCCA 13447094 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| || || || | ||||| ||||| |||||||| |||||||| ||||| || Sbjct 13447093 TCTTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATCCCTTCCTTA 13447034 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || || || || | ||| || |||| || || || | ||||| Sbjct 13447033 TCCTGAATCTTCGCTTTAACATTGTCGATCGTATCAGAACTTTCCACCTCGAGAGTGATT 13446974 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || ||||||||||||||||||||||| Sbjct 13446973 GTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 13446939 Score = 104 bits (114), Expect = 2e-17 Identities = 152/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTC 94857 |||| || | |||||| ||||| || | || ||||| | || || || || ||||| Sbjct 13447374 CAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATC-CGCA-AGAGTACGACCGTCCTC 13447317 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| ||||| | ||||| || || |||||||| |||||||||||||| || || | Sbjct 13447316 AAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCTTCCTTATCTTG 13447257 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || || || ||| ||| ||||||| || || || | || || ||||| Sbjct 13447256 AATCTTAGCTTTCACGTTATCGATGGTGTCAGAACTCTCAACCTCGAGAGTAATAGTTTT 13447197 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | || ||||||||||||||||| Sbjct 13447196 ACCAGTCAAGGTCTTCACAAAGATCTGCAT 13447167 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||||||||| || | |||| || || || | ||| ||||| || ||| || Sbjct 13447609 CGCAACACCAAATGAAGAGTACTCTCTTTCTGGATGTTGTAATCAGCCAAAGTTCTGCCG 13447550 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||| || ||| | ||||| ||||| ||||| || ||||||||||| |||||| Sbjct 13447549 TCTTCAAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCCTCTTTG 13447490 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || |||||||| || | | ||| || | | || || || | || ||| Sbjct 13447489 TCTTGGATCTTTGCCTTCACATTATCAATAGTATCGGAGCTTTCAACTTCCAAAGTAATG 13447430 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || || |||||||||||||| Sbjct 13447429 GTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 13447395 Score = 102 bits (112), Expect = 7e-17 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 ||||| |||||||| | || || ||||| || | ||| || ||| | || || || Sbjct 19969773 CGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCTA-AG-GTCCGAC 19969830 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||| ||||| ||||| |||| || | | ||||| || ||||| || ||||||| Sbjct 19969831 CATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGGATCCCTTCTT 19969890 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | || || ||||||||| | | | |||||| | | ||||| || | || | Sbjct 19969891 TGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTCGACCTCGAGGGTAA 19969950 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||| | || || || ||||||||||| Sbjct 19969951 TGGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 19969987 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | || || || || || | ||| ||||| || |||| || ||||| Sbjct 13448351 ACCAAGTGGAGGGTCGACTCTTTCTGAATGTTGTAATCCGCCA--GTGTACGACCATCCT 13448294 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || || | ||||||| | ||||| || || ||||||||||| || || | Sbjct 13448293 CAAGCTGCTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGAATACCTTCCTTATCCT 13448234 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || ||||| ||| | | ||| |||| | || || |||| ||||| || | Sbjct 13448233 GGATCTTGGCCTTCACGTTATCAATAGTATCAGAGCTCTCAACTTCAAGTGTGATTGTCT 13448174 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || |||||||| ||||| || |||||||| Sbjct 13448173 TGCCGGTAAGAGTCTTCACGAAAATCTGCAT 13448143 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || || |||||| ||||||| || || |||||||| |||||||| || || ||| Sbjct 19970289 TCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCCTTG 19970348 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | ||||||| || || || | || || Sbjct 19970349 TCTTGGATCTTAGCCTTAACGTTATCAATGGTGTCAGAACTCTCAACCTCGAGGGTAATA 19970408 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| | || || || ||||||||||| Sbjct 19970409 GTCTTACCAGTCAAGGTCTTAACGAAGATCTGCAT 19970443 >seq7 Length=29178675 Score = 127 bits (140), Expect = 2e-24 Identities = 170/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| |||||||| || | |||||| |||| ||| |||||||| || | || ||||| Sbjct 2571072 CATTCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATC 2571013 Query 94837 GCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCT 94894 | || || ||| || |||||| |||||||| || ||||||| | || || | ||| Sbjct 2571012 CC-CA-AGGGTTCGACCATCCTCGAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCT 2570955 Query 94895 GGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG 94954 ||||| || ||||| || || | || || ||||||||| || | | |||| | | Sbjct 2570954 GGAGGGATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTC 2570895 Query 94955 TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | || || ||||| ||||| || ||||||||||| || ||||| Sbjct 2570894 TCAACTTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCAT 2570842 Score = 86.0 bits (94), Expect = 6e-12 Identities = 172/250 (69%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 94761 GTTTTTTAAAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCC 94819 ||||| |||| ||| || ||| || | || || | || | ||| | ||| || ||| Sbjct 2570861 GTTTTCACAAATATTTGCATTCCACCGCGTAAACGAAGGACAAGGTGTAGAGTTGACTCC 2570802 Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGA 94877 || || | ||| ||||| | || || || || |||||| || ||||| || | |||| Sbjct 2570801 TTCTGGATGTTGTAATC-CGCA-AGAGTACGACCATCCTCGAGTTGTTTACCAGCGAAGA 2570744 Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937 | | || || | || ||||| || ||||| || || | || || ||||||||| || Sbjct 2570743 TGAGCCTCTGTTCGTCCGGAGGGATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGT 2570684 Query 94938 CGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAA 94997 | | |||| | | || || || | || || ||||| ||||| || |||||||||| Sbjct 2570683 CAATGCTGTCTGAGCTCTCAACTTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAA 2570624 Query 94998 AGATCTGCAT 95007 | || ||||| Sbjct 2570623 ATATTTGCAT 2570614 >seq4 Length=23266485 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||| | | |||||||| | || |||||||| || | ||| || || | | Sbjct 5744573 CCACCTCTCAACCTGAGAACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTC-CGC 5744515 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || || | ||| || |||||||| || ||||||||| ||||| || || |||| Sbjct 5744514 A-AGAGTACAACCATCTTCGAGCTGTTTACCCGCAAAGATTAGCCTTTGTTGGTCAGGAG 5744456 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || |||||||| || | ||| || ||||||||| | | | || || | || | Sbjct 5744455 GGATTCCTTCTTTATCTTGAATCTTCGCCTTGACGTTGTCAATTGTATCTGAACTCTCAA 5744396 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || ||| |||| ||||| || |||||||||||||| ||||| Sbjct 5744395 CTTCTAGGGTAATGATTTTACCAGTGAGTGTTTTCACAAAGATTTGCAT 5744347 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCTCCAGCTGTTTTC 94868 || |||||||| || | ||| || || || ||| || | || || || ||||||| Sbjct 22703232 GTTGATTCCTTCTGGATGTTGTAGTCAGCCAGAGTACGTCCG--TCTTCGAGTTGTTTTC 22703289 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || | |||||||||| ||| ||||| || || || ||||| ||||| | || || |||| Sbjct 22703290 CGGCGAAGATTAATCGTTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCT 22703349 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 |||| | ||| || || | || || || | ||||| || || || || || | Sbjct 22703350 TGACATTGTCGATTGTATCGGATGATTCAACCTCGAGAGTGATCGTCTTCCCTGTTAGGG 22703409 Query 94989 TTTTCACAAAGATCTGCAT 95007 ||||||| ||||||||||| Sbjct 22703410 TTTTCACGAAGATCTGCAT 22703428 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 94862 TGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATT 94921 ||||| ||| ||||||||||||||||||| || ||||| || |||||||| || | ||| Sbjct 5748389 TGTTTACCGGCAAAGATTAATCTTTGCTGGTCCGGAGGGATCCCTTCTTTATCTTGAATC 5748330 Query 94922 TTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCA 94981 || || || || | | | || || | | || || || | || |||||||| || Sbjct 5748329 TTCGCTTTAACATTGTCAATGGTATCTGAGCTCTCAACTTCTAGGGTAATGGTTTTACCC 5748270 Query 94982 GTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | || ||||| |||||||| Sbjct 5748269 GTAAGCGCCTTGACAAATATCTGCAT 5748244 >seq1 Length=25238555 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 94779 CTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-G 94837 |||||||||| ||||| | ||||| || | || ||||| || || | | | ||||| | Sbjct 18011473 CTCCTCCTCTTAATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGCTGTAATCAG 18011414 Query 94838 CTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTG 94895 | |||||| || || | |||||||| ||||||| || | ||| || || | Sbjct 18011413 CG---AGTGTTCTTCCGTCTTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGGTCCG 18011357 Query 94896 GAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGT 94955 | ||||| ||||| ||||| | ||| || || || || | | | ||||| | | Sbjct 18011356 GTGGAATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCAATTGTGTCTGAAGATT 18011297 Query 94956 CGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || | || || || || || || || |||||||||||||||||||| Sbjct 18011296 CAACCTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 18011245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448135581313560