Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 6e-11 >seq6 Length=37079636 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || |||||||| || | || || || ||||| ||| | ||| || | | Sbjct 19970215 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACCATCACCTTGGAAGTTGAAAGCTCC 19970156 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || || ||||| || ||||| || | || || || Sbjct 19970155 GACACCATTG-ACAACGTCAAGGCCAAAATCCAGGACAAAGAGGGTATTCCTCCGGACCA 19970097 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | |||| || || || ||| | || || | || ||| ||||||| || || Sbjct 19970096 GCAAAGATTGATTTTCGCCGGAAAGCAACTCGAGGACGGCAGAACTCTGGCCGACTACAA 19970037 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || || |||||||||||| | ||| |||||||| Sbjct 19970036 TATCCAGAAAGAGTCTACTCTCCATTTGGTGTTG 19970003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425200038468520