Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 143 3e-29 seq3 122 8e-23 seq4 104 2e-17 seq7 98.7 9e-16 seq5 98.7 9e-16 seq8 93.3 4e-14 >seq6 Length=37079636 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || || || | |||||||||||| ||||||||||| ||| Sbjct 19969761 CCACCACGAAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCT 19969820 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || || | || | ||||||||||||||||||| Sbjct 19969821 AAGGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGG 19969880 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| ||| || ||||| | || | ||| || | | ||||| Sbjct 19969881 ATCCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTCGACC 19969940 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||| ||||| || | || || ||||| |||||||| Sbjct 19969941 TCGAGGGTAATGGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 19969987 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||||||||| || |||||||||||||| | Sbjct 13448369 CCACCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCTTTCTGAATGTTGTAATCCGCC 13448310 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| |||||| ||||||||||||||| || Sbjct 13448309 AGTGTACGACCATCCTCAAGCTGCTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGA 13448250 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | || | |||||| | | ||| | Sbjct 13448249 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTATCAATAGTATCAGAGCTCTCAACT 13448190 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| ||||| || |||||||||||||| Sbjct 13448189 TCAAGTGTGATTGTCTTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 13448143 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || |||||||| || |||||||| || | Sbjct 19969533 CCACCACGGAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 19969592 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| || || ||| |||||| ||||||||||||||| ||| Sbjct 19969593 AAAGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGG 19969652 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | | ||||| Sbjct 19969653 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATTGTGTCAGAGCTCTCGACT 19969712 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || ||||| || |||||||||||||| Sbjct 19969713 TCAAGGGTGATGGTCTTTCCAGTAAGAGTCTTCACGAAAATCTGCAT 19969759 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||| ||||| ||||| | ||| || ||||| |||||||| ||||| | | Sbjct 33565310 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATC-CGC 33565252 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || ||||| || || || || || |||| | | ||| ||||||||||| Sbjct 33565251 AAGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGG 33565192 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| || ||| ||||| | || | || || | | ||| | Sbjct 33565191 GATCCCTTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAAC 33565132 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| |||||||| || || ||||| || || |||||||| Sbjct 33565131 TTCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||| | |||| || |||||||| ||||| ||||| || | Sbjct 13448141 CCACCACGGAGACGCAACACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAGCC 13448082 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| ||||| |||| | ||||||||||||||| ||| Sbjct 13448081 AAAGTCCGACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGGG 13448022 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | || | || || | | ||| | Sbjct 13448021 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCCACC 13447962 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| | || || |||||||||||||| Sbjct 13447961 TCAAGAGTGATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915 Score = 102 bits (112), Expect = 8e-17 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATG-GTGCGCGAGTC 131081 || || || || | ||| || ||||| || ||||||||||| | || | || || || Sbjct 33565067 AGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATC-CGCAAGAGTTCGACCATC 33565009 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| |||||||| || || |||| | | |||||||||||||||||||||||| ||||| Sbjct 33565008 CTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTC 33564949 Query 131142 GGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGG 131200 ||| ||| |||| | | | || | || || | | ||||| || | ||||| | Sbjct 33564948 -TTGAATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCGACTTCTAGGGTAATCG 33564890 Query 131201 TTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237 ||||||| || || || || || || |||| ||| || Sbjct 33564889 TTTTACCAGTAAGTGTCTTGACAAATATCTACATCAC 33564853 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||| || || | || ||||||||||| || ||||| || | Sbjct 13447913 CCACCCCGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCC 13447854 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || || |||| || | |||||||||||| || Sbjct 13447853 AAGGTACGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGA 13447794 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | || | ||| || | | ||| | Sbjct 13447793 ATACCTTCCTTATCTTGGATCTTTGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCCACC 13447734 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| ||||| || | || || ||||| || ||||| Sbjct 13447733 TCGAGAGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||| ||||| | || ||||| || || || ||||| ||| | Sbjct 19969989 CCACCACGTAGACGCAACACCAAATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGCC 19970048 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | |||||| || ||||| || ||| | || || | |||||||||||||| Sbjct 19970049 AGAGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAAATCAATCTTTGCTGGTCCGGAGGA 19970108 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| |||||| ||||| | || | || |||| | || | Sbjct 19970109 ATACCCTCTTTGTCCTGGATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAACT 19970168 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| |||||||| | || || || || |||||||| Sbjct 19970169 TCCAAGGTGATGGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 19970215 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||| ||||| | || ||| || || ||||||||||| | Sbjct 13447621 CCACCACGTAGACGCAACACCAAATGAAGAGTACTCTCTTTCTGGATGTTGTAATCAGCC 13447562 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || |||||||| || ||| |||| || | ||||||||||||||| Sbjct 13447561 AAAGTTCTGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 13447502 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||| || ||| | | || | |||||||| | || | Sbjct 13447501 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTATCAATAGTATCGGAGCTTTCAACT 13447442 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || || | || || || || |||||||| Sbjct 13447441 TCCAAAGTAATGGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 13447395 >seq3 Length=27950219 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | ||||||||| || || || | || ||||||||||| ||||||||||| | Sbjct 5226822 CCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAGCC 5226881 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||| || || || |||| | | || |||||||||||| Sbjct 5226882 AAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAGGG 5226941 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||||||||| ||| || |||| | || || || |||| | |||| Sbjct 5226942 ATTCCTTCTTTGTCTTGGATCTTGGCATTGACGTTTTCGACGGTGTCGGAGCTTTCGACC 5227001 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || |||||||| ||||| || ||||| Sbjct 5227002 TCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCAT 5227048 Score = 102 bits (112), Expect = 8e-17 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||| ||||| ||||| | ||| || ||||| |||||||| ||||| | | Sbjct 14806201 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATC-CGC 14806143 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || ||||| || || || || || |||| | | ||| | ||||||||| Sbjct 14806142 AAGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGAGG 14806083 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 ||||||||| ||||| ||| | | |||| | | | || | || | | | ||||| Sbjct 14806082 GATTCCTTCCTTGTC-TTGAATCTTAGCTTTAACATTGTCAATGGTGTATGAGCTCTCGA 14806024 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237 || | ||||| ||||||||| || || || || || || |||||||| || Sbjct 14806023 CTTCTAGGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCATCAC 14805972 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || |||||||| || |||||||| | | Sbjct 5226594 CCACCACGAAGACGAAGAACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATC-CGC 5226652 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || ||||||||||| || || || |||| | | ||| |||||||||| Sbjct 5226653 AAGAGTACGACCATCCTCTAGCTGTTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGA 5226712 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||| || ||| || |||| | || | || || | | |||| Sbjct 5226713 GATTCCTTCTTTATCTTGGATCTTGGCTTTGACGTTGTCAATGGTGTCTGAGCTTTCGAC 5226772 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | |||||| || ||||| ||||| || || || ||||| Sbjct 5226773 CTCGAGTGTTATGGTTTTGCCAGTTAGGGTTTTCACAAAGATTTGCAT 5226820 >seq4 Length=23266485 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || || ||||| || |||||||| || | Sbjct 22703202 CCACCACGAAGACGAAGGACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCAGCC 22703261 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || || || || || ||| ||||||| || || || ||||| ||| Sbjct 22703262 AGAGTACGTCCGTCTTCGAGTTGTTTTCCGGCGAAGATTAATCGTTGTTGATCCGGTGGG 22703321 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | || | ||||||| || || | Sbjct 22703322 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTATCGGATGATTCAACC 22703381 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || ||||| ||||| ||||| |||||||| Sbjct 22703382 TCGAGAGTGATCGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 22703428 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||| || || | || | || ||||| || ||||||||||| || ||| Sbjct 5738689 CCACCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCT 5738630 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | | || |||||||| || || || | |||||| | ||| |||||| |||| Sbjct 5738629 AAAG-TCCGACCATCCTCTAGTTGTTTTCCGGTAAAGATTAGCCTCTGTTGGTCCAGAGG 5738571 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| || ||| ||||| | || | ||| || | | ||| | Sbjct 5738570 GATTCCTTCCTTGTCTTGAATCTTCGCCTTGATGTTGTCAATAGTGTCTGAGCTCTCAAC 5738511 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| |||||||| || || || || || || |||||||| Sbjct 5738510 TTCTAGGGTAATAGTTTTACCAGTAAGCGTCTTGACAAATATCTGCAT 5738463 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| ||||| || || | || | || ||||||||||| |||||||| || | | Sbjct 5744969 CCACCGCGTAAACGAAGGACAAGGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTC-CGC 5744911 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || ||||| ||||| || || || |||| | | || ||| |||||||| Sbjct 5744910 AAGAGTACGGCCATCCTCGAGCTGTTTACCCGCAAAGATAAGTCTCTTCTGTTCCGGAGG 5744851 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 ||| ||||| ||||| ||| | | |||| | | | || | || || | | ||| | Sbjct 5744850 GATCCCTTCCTTGTC-TTGAATCTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCAA 5744792 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||||||| ||| || || || || || |||||||| Sbjct 5744791 CTTCTAGGGTAATGGTTTTATTGGTAAGCGTCTTGACAAATATCTGCAT 5744743 >seq7 Length=29178675 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| ||||| || || | |||| || |||||||| || ||||||||||| | | Sbjct 2570612 CCACCGCGTAAACGAAGAACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATC-CGC 2570554 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || ||||| || || || || ||| |||| | | ||| | ||||||||| Sbjct 2570553 AAGTGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGTTCGTCCGGAGG 2570494 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| || || ||| ||| ||||| | || | || || | | |||| Sbjct 2570493 GATCCCTTCCTTATCTTGGATCTTCGCCTTGACATCGTCAATGGTTTCTGAGCTTTCGAC 2570434 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237 |||| ||| | ||| || || || ||||| || || || || ||||| || Sbjct 2570433 CTCGAGGGTTATGGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCATCAC 2570383 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| ||||| || || | |||| || |||||||| || ||||||||||| | | Sbjct 2570840 CCACCGCGTAAACGAAGGACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATC-CGC 2570782 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || ||||| || || || || ||| |||| | | ||| | ||||||||| Sbjct 2570781 AAGAGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCCGGAGG 2570722 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| || || ||| ||| ||||| | || | | || | | ||| | Sbjct 2570721 GATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAAC 2570662 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| |||||||| || || ||||| || || || ||||| Sbjct 2570661 TTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCAT 2570614 >seq5 Length=22804910 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || || || || || |||||||| || Sbjct 22133804 CCACCACGAAGACGAAGGACAAGATGAAGCGTTGATTCTTTCTGGATGTTGTAGTCAGCG 22133745 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || || || || || ||| |||||||||| ||||||||||| ||| Sbjct 22133744 AGAGTACGTCCGTCTTCGAGTTGTTTTCCAGCGAAGATTAAACGTTGCTGGTCCGGTGGG 22133685 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || |||| | || | ||||| | || || | Sbjct 22133684 ATTCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTATCTGATGATTCAACC 22133625 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || ||||| ||||| ||||| |||||||| Sbjct 22133624 TCGAGAGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 22133578 >seq8 Length=40886855 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | ||||| ||||| || ||||||||||| | | Sbjct 1188620 CCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATC-CGC 1188678 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || | || || || ||||| || ||| |||| | | |||||| |||||||| Sbjct 1188679 AAGAGTCCTTCCATCTTCAAGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGG 1188738 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| || || ||| | | || | || || | | ||| | Sbjct 1188739 AATCCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCAC 1188798 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||||||||| || || || || ||||| |||||||| Sbjct 1188799 CTCAAGGGTAATGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 1188846 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| || || || || || | |||||||||||| || || ||||| ||| Sbjct 1190057 CCACCTCTCAATCGGAGAACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAGTCGGCA 1190116 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || || || ||||| || ||| |||| | | ||||| |||||||| Sbjct 1190117 AGAGTCCTTCCATCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGA 1190176 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | || | ||| || | | ||||| Sbjct 1190177 ATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACC 1190236 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || |||||||| ||||| || ||||| Sbjct 1190237 TCGAGAGTTATGGTCTTTCCAGTAAGAGTTTTCACGAATATTTGCAT 1190283 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | || | || ||||| || || ||||||||||| | | Sbjct 1189829 CCACCACGAAGACGCAAGACAAGGTGGAGTGTGGACTCTTTCTGGATGTTGTAATC-CGC 1189887 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || | || || |||||||| || ||| |||| | | ||||| |||||||| Sbjct 1189888 AAGAGTCCTTCCATCTTCAAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGG 1189947 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| |||||||| ||| || ||||| | || | |||||||| | || | Sbjct 1189948 AATTCCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATAGTATCGGAGCTTTCAAC 1190007 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || ||||| | ||| || || || || ||||| Sbjct 1190008 CTCAAGAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 1190055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471848946656640