Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6 122 8e-23 seq3 120 3e-22 seq7 118 9e-22 seq1 118 9e-22 seq8 104 2e-17 seq4 102 7e-17 >seq6 Length=37079636 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| ||||| |||| || |||| |||||| ||| Sbjct 13447687 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACTCTCGAGGTGGAGAGCTCT 13447746 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || ||||| ||| ||| || || ||||| |||||||| ||||| Sbjct 13447747 GACACTATTGACAACGTGAAGGCAAAGATCCAAGATAAGGAAGGTATTCCACCGGACCAG 13447806 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || |||||||| || || | || |||| ||| || ||| || |||||| Sbjct 13447807 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCTGACTACAAT 13447866 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208 || ||||| || || || | || || ||| Sbjct 13447867 ATCCAAAAGGAGTCTACATTGCACTTGGTG 13447896 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||||||||| ||||||| | ||||| || || Sbjct 19970215 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACCATCACCTTGGAAGTTGAAAGCTCC 19970156 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| |||||| |||||||| || ||||| || ||||| Sbjct 19970155 GACACCATTGACAACGTCAAGGCCAAAATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 19970096 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | ||||| ||||| || ||| | || || | | ||| ||| ||| |||||| Sbjct 19970095 CAAAGATTGATTTTCGCCGGAAAGCAACTCGAGGACGGCAGAACTCTGGCCGACTACAAT 19970036 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208 || || ||||| || || || ||||| ||| Sbjct 19970035 ATCCAGAAAGAGTCTACTCTCCATTTGGTG 19970006 Score = 107 bits (118), Expect = 2e-18 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| |||||| | || || |||| || ||| ||| Sbjct 13447167 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAAACTATTACTCTCGAGGTTGAGAGTTCT 13447226 Query 25059 GACACTATCGAGTCAC-TGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || |||| || || | ||| || || ||||| ||||| || || | Sbjct 13447227 GACACCATCGA-TAACGTGAAAGCTAAGATTCAA-GATAAGGAAGGTATTCCTCCGGATC 13447284 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || | || || || || || || | || || | ||| ||| | | ||||||| Sbjct 13447285 AGCAGAGGTTGATCTTCGCTGGAAAGCAGCTTGAGGACGGTCGTACTCTTGCGGATTACA 13447344 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||| || || || || || || ||| | ||||| ||||| Sbjct 13447345 ATATCCAGAAGGAGTCTACTCTTCATCTTGTGCTCAGGCT 13447384 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || ||| | ||||| || | ||||| |||| ||||| ||| Sbjct 13446939 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACAATCACTCTCGAGGTGGAAAGTTCT 13446998 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| || || |||| || | ||| || || ||||||||||| || || Sbjct 13446999 GATACGATCGA--CAATGTTAAAGCGAAGATTCAG-GATAAGGAAGGGATTCCTCCGGAT 13447055 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | | || || || || || ||||| ||||||| || || ||| |||||| Sbjct 13447056 CAGCAGAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGGCGTACCTTGGCGGATTAC 13447115 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTG 25208 ||||| || || ||||| || || || || ||| Sbjct 13447116 AATATCCAGAAGGAATCAACTCTTCACTTGGTG 13447148 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| ||||| |||| || |||| || ||| || Sbjct 19969987 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTCGAGAGCTCA 19969928 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| || ||| |||||||||||||| || || ||||| Sbjct 19969927 GACACTATTGACAACGTCAAGGCCAAGATCCAGGACAAAGAAGGGATCCCTCCGGACCAG 19969868 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||| || || || | || |||| ||| || | | ||| ||||| Sbjct 19969867 CAGCGTCTCATTTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACCTTAGCCGACTACAAC 19969808 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||| || || || || || || || || Sbjct 19969807 ATTCAGAAGGAGTCGACCCTTCACTTGGT 19969779 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || | ||||| | || |||||| || Sbjct 13447915 ATGCAGATTTTCGTTAAGACCTTGACCGGGAAGACAATCACTCTTGAGGTGGAGAGCTCA 13447974 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||| || || || ||||| ||||| Sbjct 13447975 GACACAATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAG 13448034 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || || | || |||| ||| ||| ||| || |||||| Sbjct 13448035 CAGCGTCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTCGGACTTTGGCTGACTACAAT 13448094 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 ||||| || || ||||| |||| Sbjct 13448095 ATTCAGAAGGAGTCCACATTACA 13448117 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||||||||| || || | || || | || || || || Sbjct 33565312 ATGCAGATATTTGTCAAGACTTTGACGGGAAAGACGATAACTCTTGAGGTCGAAAGCTCG 33565371 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || |||| || | ||| || || |||||||| || || ||| Sbjct 33565372 GATACAATTGA--CAATGTGAAAGCGAAGATTCA-AGATAAGGAAGGGATCCCTCCGGAC 33565428 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || ||||| || |||||| | ||||||| ||| || | | || ||| Sbjct 33565429 CAGCAGAGGCTAATCTTTGCGGGAAAACAACTCGAAGATGGTCGGACATTAGCGGACTAC 33565488 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || ||||| ||||| || || || || Sbjct 33565489 AACATTCAGAAAGAGTCAACTCTTCA 33565514 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || ||| | ||||| || | ||||| |||| ||||| ||| Sbjct 19970671 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGTTCT 19970612 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| || || || || ||||| || || || Sbjct 19970611 GACACGATCGACAACGTTAAGGCTAAGATCCAAGATAAGGAGGGAATTCCTCCGGATCAG 19970552 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || || || || || || || ||||||| || || ||| ||||||||| Sbjct 19970551 CAGAGATTGATCTTCGCTGGAAAGCAGTTGGAAGATGGCCGTACCTTGGCGGATTACAAT 19970492 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || || || || || || || || || ||||| Sbjct 19970491 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTCAGGCT 19970454 >seq3 Length=27950219 Score = 120 bits (132), Expect = 3e-22 Identities = 139/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 25018 CTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCAC-TG 25076 ||||||| || ||| |||| || | || || ||| ||||| || || || | || || Sbjct 5226288 CTTTGACAGGGAAAACCATTACTCTTGAGGTAGAGAGCTCTGATACGATTGA-TAACGTG 5226230 Query 25077 AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCC 25136 ||| ||| || |||||||||||||||||||| ||||||||| || | || |||| | Sbjct 5226229 AAGGCAAAGATACAAGACAAAGAAGGGATTCCACCGGACCAACAGAGGCTAATCTTTGTC 5226170 Query 25137 GGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACG 25196 || || || ||||||||| ||| ||| | | |||||||||||||| ||||| || || Sbjct 5226169 GGGAAGCAGCTAGAAGATGGTCGGACTTTAGCTGATTACAATATTCAGAAAGAGTCAACA 5226110 Query 25197 CTACA 25201 || || Sbjct 5226109 CTTCA 5226105 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || | || || ||| |||| ||| |||| || || || Sbjct 5226820 ATGCAAATCTTTGTGAAAACCCTAACTGGCAAAACCATAACACTCGAGGTCGAAAGCTCA 5226761 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| |||| || | || || |||||||| || | || || Sbjct 5226760 GACACCATTGACAACGTCA---AAGCCAAGATCCAA-GATAAAGAAGGAATCTCTCCGGA 5226705 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||| | |||| |||||||| ||||| |||| |||| ||| ||| | | ||||| Sbjct 5226704 CCAACAGAGACTTATCTTTGCCGGTAAACAGCTAGAGGATGGTCGTACTCTTGCGGATTA 5226645 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 |||||| ||||| ||||| || || || Sbjct 5226644 CAATATCCAAAAGGAATCAACACTTCA 5226618 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | || || || |||| ||| | || || || || Sbjct 5227048 ATGCAAATCTTCGTGAAAACTCTTACGGGCAAGACCATAACACTTGAGGTCGAAAGCTCC 5226989 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| |||| |||| || || ||| ||||||||||| || || || || Sbjct 5226988 GACACCGTCGAAAACGTCAATGCC----AAGATCCAAGACAAAGAAGGAATCCCTCCGGA 5226933 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || |||| |||||||| ||||| | || || | || || ||| ||||| Sbjct 5226932 CCAACAAAGGCTTATCTTTGCCGGTAAACAGCTCGAGGACGGCCGTACCTTGGCTGATTA 5226873 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || ||||| || || || || || || || || | | |||||||| Sbjct 5226872 CAACATCCAAAAGGAGTCAACTCTCCACTTGGTTCTGCGTTTGAGAGGAGG 5226822 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/172 (72%), Gaps = 8/172 (5%) Strand=Plus/Minus Query 25044 GAAGTGGAGTCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGA 25099 ||||| ||| || ||||| ||||| |||| | || || | ||| ||||| || Sbjct 5226479 GAAGTTGAGAGCTCAGACACCATCGACAACGTCA---AGGCCAAGATTCAA-GACAAGGA 5226424 Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 |||||| | || ||||||||| | |||| || || || ||||| | || |||| ||| Sbjct 5226423 AGGGATCACTCCGGACCAACAGAGACTTATATTCGCTGGTAAACAGCTCGAGGATGGTCG 5226364 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||| | | ||||||||||| ||||| || || || || || | |||||| Sbjct 5226363 CACTCTTGCGGATTACAATATCCAAAAGGAGTCTACACTTCACCTTGTGCTA 5226312 >seq7 Length=29178675 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||| || || | || |||||| | || || | ||||| ||| || Sbjct 2570841 AATGCAAATATTTGTGAAAACACTCACTGGTAAAACTATTACCTTAGAAGTTGAGAGCTC 2570900 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||| || || | ||| || ||| || || |||||||| || || ||| | Sbjct 2570901 AGACAGCATTGACGACGTCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCAGACGA 2570960 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || | || ||||| || ||||| | || |||| ||| || | || |||||||| Sbjct 2570961 ACAGAGGCTCATCTTTGCTGGTAAACAGCTCGAGGATGGTCGAACCCTTGGGGATTACAA 2571020 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||||| || ||||| || || ||||| |||||| | | ||||| |||| Sbjct 2571021 TATTCAGAAGGAATCAACTCTGCATTTGGTGCTACGTTTGAGAGGTGGAA 2571070 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||| || || | || |||||| | || || | ||||| ||| || Sbjct 2570613 AATGCAAATATTTGTGAAAACACTCACTGGTAAAACTATTACCTTAGAAGTTGAGAGCTC 2570672 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||| || || | ||| || ||| || || |||||||| || || ||| | Sbjct 2570673 AGACAGCATTGACGACGTCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCGGACGA 2570732 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || | || || || || |||||| | || |||| ||| ||| | | |||||||| Sbjct 2570733 ACAGAGGCTCATCTTCGCTGGTAAACAACTCGAGGATGGTCGTACTCTTGCGGATTACAA 2570792 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || || || ||||| Sbjct 2570793 CATCCAGAAGGAGTCAACTCTACA 2570816 >seq1 Length=25238555 Score = 118 bits (130), Expect = 9e-22 Identities = 167/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| || || | || || || | || || | || || || || || Sbjct 18011244 AATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTC 18011303 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || || || |||| || | ||| ||||| ||||| |||||||| || Sbjct 18011304 AGACACAATTGA--CAATGTGAAAGCGAAGATTCAA-GACAAGGAAGGAATTCCACCGGA 18011360 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | || ||||| || |||||||||||||| | | || | | ||||| Sbjct 18011361 CCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAAGACGGAAGAACACTCGCTGATTA 18011420 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 || || || |||||||| ||||| ||||| || ||| | ||||||||||| Sbjct 18011421 CAGCATCCAGAAAGAATCAACGCTTCATTTGGTTCTACGATTAAGAGGAGGA 18011472 >seq8 Length=40886855 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| ||||| || ||||| | || |||||| |||| || | || |||||| || Sbjct 1188846 ATGCAGATATTCGTGAAGACCCTCACTGGTAAAACCATTACCCTTGAGGTGGAGAGCTCA 1188787 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| | || | ||| ||||| ||||||||||| || || || Sbjct 1188786 GACACAATAGACAATGTGAAGGCTAAGATTCAG-GACAAGGAAGGGATTCCTCCGGATCA 1188728 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | |||| || ||||| || ||| | ||||||| | ||| | | |||||||| Sbjct 1188727 GCAGAGACTTATCTTCGCCGGTAAGCAACTTGAAGATGGAAGGACTCTTGCGGATTACAA 1188668 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 || || || ||||| || || ||||| || || | || | || ||||| Sbjct 1188667 CATCCAGAAGGAATCGACTCTTCATTTGGTTCTTCGTCTTCGTGGTGGAAA 1188617 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || || ||| | || || || |||| || |||| || ||| ||| Sbjct 1190283 ATGCAAATATTCGTGAAAACTCTTACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 1190224 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| ||| ||| ||||| ||||| ||||| || || || Sbjct 1190223 GACACTATCGATAATGTTAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAG 1190164 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | |||| || || || || ||| | ||||||| | ||| | | ||| |||||| Sbjct 1190163 CAAAGACTTATCTTCGCTGGTAAGCAACTTGAAGATGGAAGGACTCTTGCCGACTACAAT 1190104 Query 25179 ATTCAAAAAGAATCCAC 25195 || || || || || || Sbjct 1190103 ATCCAGAAGGAGTCGAC 1190087 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||||||||||| || |||| || | || || || || Sbjct 1190055 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTTGAGGTTGAAAGCTCC 1189996 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || ||||| || | ||| || ||| |||||||| || ||||| || || || Sbjct 1189995 GATACTATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAGGGAATTCCTCCGGATCAG 1189936 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | |||| || || || || || | ||||||| | ||| | | |||||||| Sbjct 1189935 CAAAGACTTATCTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCGGATTACAAC 1189876 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || ||||| ||||| || || Sbjct 1189875 ATCCAGAAAGAGTCCACACTCCA 1189853 >seq4 Length=23266485 Score = 102 bits (112), Expect = 7e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||||||||| || |||||||| |||||| || | |||||||| || || ||| | ||| Sbjct 12669084 GACAAAGAAGGTATACCACCTGATCAACAGAGGCTGATTTTTGCTGGTAAGCAACTTGAA 12669143 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||| ||| || | | |||||||| || || ||||| || || || ||| | || | Sbjct 12669144 GATGGTCGAACCTTAGCTGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTGTCTTG 12669203 Query 25212 AGGCTAAGAGGAGGAA 25227 ||||| ||||| |||| Sbjct 12669204 AGGCTTAGAGGTGGAA 12669219 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || | || |||||| ||| || | ||||| ||| || Sbjct 5744347 ATGCAAATCTTTGTGAAAACACTCACTGGTAAAATCATTACCCTAGAAGTTGAGAGTTCA 5744406 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| | || || | ||| || |||||||| || || ||||| Sbjct 5744407 GATACAATTGACAACGTCA---AGGCGAAGATTCAA-GATAAAGAAGGAATCCCTCCTGA 5744462 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | || ||||| || ||||| | ||||||| | | ||| | | || || Sbjct 5744463 CCAACAAAGGCTAATCTTTGCGGGTAAACAGCTCGAAGATGGTTGTACTCTTGCGGACTA 5744522 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || || ||||| || || || || || || ||| | ||||| || Sbjct 5744523 CAACATCCAGAAGGAATCAACCCTCCACTTGGTTCTCAGGTTGAGAGGTGG 5744573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433181336211365