Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12]
27,771 sequences; 308,032,609 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 122 8e-23
seq3 120 3e-22
seq7 118 9e-22
seq1 118 9e-22
seq8 104 2e-17
seq4 102 7e-17
>seq6
Length=37079636
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||| ||||| |||| || |||| |||||| |||
Sbjct 13447687 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACTCTCGAGGTGGAGAGCTCT 13447746
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || ||||| ||| ||| || || ||||| |||||||| |||||
Sbjct 13447747 GACACTATTGACAACGTGAAGGCAAAGATCCAAGATAAGGAAGGTATTCCACCGGACCAG 13447806
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || |||||||| || || | || |||| ||| || ||| || ||||||
Sbjct 13447807 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCTGACTACAAT 13447866
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|| ||||| || || || | || || |||
Sbjct 13447867 ATCCAAAAGGAGTCTACATTGCACTTGGTG 13447896
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| ||||||||||| ||||||| | ||||| || ||
Sbjct 19970215 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACCATCACCTTGGAAGTTGAAAGCTCC 19970156
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || | ||| |||||| |||||||| || ||||| || |||||
Sbjct 19970155 GACACCATTGACAACGTCAAGGCCAAAATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 19970096
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| | | ||||| ||||| || ||| | || || | | ||| ||| ||| ||||||
Sbjct 19970095 CAAAGATTGATTTTCGCCGGAAAGCAACTCGAGGACGGCAGAACTCTGGCCGACTACAAT 19970036
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTG 25208
|| || ||||| || || || ||||| |||
Sbjct 19970035 ATCCAGAAAGAGTCTACTCTCCATTTGGTG 19970006
Score = 107 bits (118), Expect = 2e-18
Identities = 159/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| ||||| |||||| | || || |||| || ||| |||
Sbjct 13447167 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAAACTATTACTCTCGAGGTTGAGAGTTCT 13447226
Query 25059 GACACTATCGAGTCAC-TGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| | || |||| || || | ||| || || ||||| ||||| || || |
Sbjct 13447227 GACACCATCGA-TAACGTGAAAGCTAAGATTCAA-GATAAGGAAGGTATTCCTCCGGATC 13447284
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||| || | || || || || || || | || || | ||| ||| | | |||||||
Sbjct 13447285 AGCAGAGGTTGATCTTCGCTGGAAAGCAGCTTGAGGACGGTCGTACTCTTGCGGATTACA 13447344
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|||| || || || || || || ||| | ||||| |||||
Sbjct 13447345 ATATCCAGAAGGAGTCTACTCTTCATCTTGTGCTCAGGCT 13447384
Score = 102 bits (112), Expect = 7e-17
Identities = 152/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || ||| | ||||| || | ||||| |||| ||||| |||
Sbjct 13446939 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACAATCACTCTCGAGGTGGAAAGTTCT 13446998
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || ||||| || || |||| || | ||| || || ||||||||||| || ||
Sbjct 13446999 GATACGATCGA--CAATGTTAAAGCGAAGATTCAG-GATAAGGAAGGGATTCCTCCGGAT 13447055
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| | | || || || || || ||||| ||||||| || || ||| ||||||
Sbjct 13447056 CAGCAGAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGGCGTACCTTGGCGGATTAC 13447115
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTG 25208
||||| || || ||||| || || || || |||
Sbjct 13447116 AATATCCAGAAGGAATCAACTCTTCACTTGGTG 13447148
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| ||||| ||||| |||| || |||| || ||| ||
Sbjct 19969987 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTCGAGAGCTCA 19969928
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || | ||| || ||| |||||||||||||| || || |||||
Sbjct 19969927 GACACTATTGACAACGTCAAGGCCAAGATCCAGGACAAAGAAGGGATCCCTCCGGACCAG 19969868
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | |||||||| || || || | || |||| ||| || | | ||| |||||
Sbjct 19969867 CAGCGTCTCATTTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACCTTAGCCGACTACAAC 19969808
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207
||||| || || || || || || || ||
Sbjct 19969807 ATTCAGAAGGAGTCGACCCTTCACTTGGT 19969779
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||||||| || | ||||| | || |||||| ||
Sbjct 13447915 ATGCAGATTTTCGTTAAGACCTTGACCGGGAAGACAATCACTCTTGAGGTGGAGAGCTCA 13447974
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| || ||| ||||| || || || ||||| |||||
Sbjct 13447975 GACACAATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAG 13448034
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| || || || | || |||| ||| ||| ||| || ||||||
Sbjct 13448035 CAGCGTCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTCGGACTTTGGCTGACTACAAT 13448094
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
||||| || || ||||| ||||
Sbjct 13448095 ATTCAGAAGGAGTCCACATTACA 13448117
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| |||||||| ||||||||||| || || | || || | || || || ||
Sbjct 33565312 ATGCAGATATTTGTCAAGACTTTGACGGGAAAGACGATAACTCTTGAGGTCGAAAGCTCG 33565371
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || || || || || |||| || | ||| || || |||||||| || || |||
Sbjct 33565372 GATACAATTGA--CAATGTGAAAGCGAAGATTCA-AGATAAGGAAGGGATCCCTCCGGAC 33565428
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| || | || ||||| || |||||| | ||||||| ||| || | | || |||
Sbjct 33565429 CAGCAGAGGCTAATCTTTGCGGGAAAACAACTCGAAGATGGTCGGACATTAGCGGACTAC 33565488
Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201
|| ||||| ||||| || || || ||
Sbjct 33565489 AACATTCAGAAAGAGTCAACTCTTCA 33565514
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || ||| | ||||| || | ||||| |||| ||||| |||
Sbjct 19970671 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGTTCT 19970612
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| || || || || ||||| || || ||
Sbjct 19970611 GACACGATCGACAACGTTAAGGCTAAGATCCAAGATAAGGAGGGAATTCCTCCGGATCAG 19970552
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| | | || || || || || || || ||||||| || || ||| |||||||||
Sbjct 19970551 CAGAGATTGATCTTCGCTGGAAAGCAGTTGGAAGATGGCCGTACCTTGGCGGATTACAAT 19970492
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|| || || || || || || || || || || |||||
Sbjct 19970491 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTCAGGCT 19970454
>seq3
Length=27950219
Score = 120 bits (132), Expect = 3e-22
Identities = 139/185 (75%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 25018 CTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCAC-TG 25076
||||||| || ||| |||| || | || || ||| ||||| || || || | || ||
Sbjct 5226288 CTTTGACAGGGAAAACCATTACTCTTGAGGTAGAGAGCTCTGATACGATTGA-TAACGTG 5226230
Query 25077 AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCC 25136
||| ||| || |||||||||||||||||||| ||||||||| || | || |||| |
Sbjct 5226229 AAGGCAAAGATACAAGACAAAGAAGGGATTCCACCGGACCAACAGAGGCTAATCTTTGTC 5226170
Query 25137 GGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACG 25196
|| || || ||||||||| ||| ||| | | |||||||||||||| ||||| || ||
Sbjct 5226169 GGGAAGCAGCTAGAAGATGGTCGGACTTTAGCTGATTACAATATTCAGAAAGAGTCAACA 5226110
Query 25197 CTACA 25201
|| ||
Sbjct 5226109 CTTCA 5226105
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 8/207 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || | || || ||| |||| ||| |||| || || ||
Sbjct 5226820 ATGCAAATCTTTGTGAAAACCCTAACTGGCAAAACCATAACACTCGAGGTCGAAAGCTCA 5226761
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || |||| |||| || | || || |||||||| || | || ||
Sbjct 5226760 GACACCATTGACAACGTCA---AAGCCAAGATCCAA-GATAAAGAAGGAATCTCTCCGGA 5226705
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||| | |||| |||||||| ||||| |||| |||| ||| ||| | | |||||
Sbjct 5226704 CCAACAGAGACTTATCTTTGCCGGTAAACAGCTAGAGGATGGTCGTACTCTTGCGGATTA 5226645
Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201
|||||| ||||| ||||| || || ||
Sbjct 5226644 CAATATCCAAAAGGAATCAACACTTCA 5226618
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/231 (68%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || ||| | || || || |||| ||| | || || || ||
Sbjct 5227048 ATGCAAATCTTCGTGAAAACTCTTACGGGCAAGACCATAACACTTGAGGTCGAAAGCTCC 5226989
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| |||| |||| || || ||| ||||||||||| || || || ||
Sbjct 5226988 GACACCGTCGAAAACGTCAATGCC----AAGATCCAAGACAAAGAAGGAATCCCTCCGGA 5226933
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||| || |||| |||||||| ||||| | || || | || || ||| |||||
Sbjct 5226932 CCAACAAAGGCTTATCTTTGCCGGTAAACAGCTCGAGGACGGCCGTACCTTGGCTGATTA 5226873
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||| || ||||| || || || || || || || || | | ||||||||
Sbjct 5226872 CAACATCCAAAAGGAGTCAACTCTCCACTTGGTTCTGCGTTTGAGAGGAGG 5226822
Score = 84.2 bits (92), Expect = 2e-11
Identities = 123/172 (72%), Gaps = 8/172 (5%)
Strand=Plus/Minus
Query 25044 GAAGTGGAGTCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGA 25099
||||| ||| || ||||| ||||| |||| | || || | ||| ||||| ||
Sbjct 5226479 GAAGTTGAGAGCTCAGACACCATCGACAACGTCA---AGGCCAAGATTCAA-GACAAGGA 5226424
Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159
|||||| | || ||||||||| | |||| || || || ||||| | || |||| |||
Sbjct 5226423 AGGGATCACTCCGGACCAACAGAGACTTATATTCGCTGGTAAACAGCTCGAGGATGGTCG 5226364
Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|||| | | ||||||||||| ||||| || || || || || | ||||||
Sbjct 5226363 CACTCTTGCGGATTACAATATCCAAAAGGAGTCTACACTTCACCTTGTGCTA 5226312
>seq7
Length=29178675
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||| || || | || |||||| | || || | ||||| ||| ||
Sbjct 2570841 AATGCAAATATTTGTGAAAACACTCACTGGTAAAACTATTACCTTAGAAGTTGAGAGCTC 2570900
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||| || || | ||| || ||| || || |||||||| || || ||| |
Sbjct 2570901 AGACAGCATTGACGACGTCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCAGACGA 2570960
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || | || ||||| || ||||| | || |||| ||| || | || ||||||||
Sbjct 2570961 ACAGAGGCTCATCTTTGCTGGTAAACAGCTCGAGGATGGTCGAACCCTTGGGGATTACAA 2571020
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||||| || ||||| || || ||||| |||||| | | ||||| ||||
Sbjct 2571021 TATTCAGAAGGAATCAACTCTGCATTTGGTGCTACGTTTGAGAGGTGGAA 2571070
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||| || || | || |||||| | || || | ||||| ||| ||
Sbjct 2570613 AATGCAAATATTTGTGAAAACACTCACTGGTAAAACTATTACCTTAGAAGTTGAGAGCTC 2570672
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||| || || | ||| || ||| || || |||||||| || || ||| |
Sbjct 2570673 AGACAGCATTGACGACGTCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCGGACGA 2570732
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || | || || || || |||||| | || |||| ||| ||| | | ||||||||
Sbjct 2570733 ACAGAGGCTCATCTTCGCTGGTAAACAACTCGAGGATGGTCGTACTCTTGCGGATTACAA 2570792
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
|| || || || || || |||||
Sbjct 2570793 CATCCAGAAGGAGTCAACTCTACA 2570816
>seq1
Length=25238555
Score = 118 bits (130), Expect = 9e-22
Identities = 167/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || || | || || || | || || | || || || || ||
Sbjct 18011244 AATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTC 18011303
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || || || |||| || | ||| ||||| ||||| |||||||| ||
Sbjct 18011304 AGACACAATTGA--CAATGTGAAAGCGAAGATTCAA-GACAAGGAAGGAATTCCACCGGA 18011360
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||| || | || ||||| || |||||||||||||| | | || | | |||||
Sbjct 18011361 CCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAAGACGGAAGAACACTCGCTGATTA 18011420
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226
|| || || |||||||| ||||| ||||| || ||| | |||||||||||
Sbjct 18011421 CAGCATCCAGAAAGAATCAACGCTTCATTTGGTTCTACGATTAAGAGGAGGA 18011472
>seq8
Length=40886855
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| ||||| || ||||| | || |||||| |||| || | || |||||| ||
Sbjct 1188846 ATGCAGATATTCGTGAAGACCCTCACTGGTAAAACCATTACCCTTGAGGTGGAGAGCTCA 1188787
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || ||||| | || | ||| ||||| ||||||||||| || || ||
Sbjct 1188786 GACACAATAGACAATGTGAAGGCTAAGATTCAG-GACAAGGAAGGGATTCCTCCGGATCA 1188728
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | |||| || ||||| || ||| | ||||||| | ||| | | ||||||||
Sbjct 1188727 GCAGAGACTTATCTTCGCCGGTAAGCAACTTGAAGATGGAAGGACTCTTGCGGATTACAA 1188668
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228
|| || || ||||| || || ||||| || || | || | || |||||
Sbjct 1188667 CATCCAGAAGGAATCGACTCTTCATTTGGTTCTTCGTCTTCGTGGTGGAAA 1188617
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||||||||| || || ||| | || || || |||| || |||| || ||| |||
Sbjct 1190283 ATGCAAATATTCGTGAAAACTCTTACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 1190224
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | ||| ||| ||| ||||| ||||| ||||| || || ||
Sbjct 1190223 GACACTATCGATAATGTTAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAG 1190164
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| | |||| || || || || ||| | ||||||| | ||| | | ||| ||||||
Sbjct 1190163 CAAAGACTTATCTTCGCTGGTAAGCAACTTGAAGATGGAAGGACTCTTGCCGACTACAAT 1190104
Query 25179 ATTCAAAAAGAATCCAC 25195
|| || || || || ||
Sbjct 1190103 ATCCAGAAGGAGTCGAC 1190087
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||||||||||| || |||| || | || || || ||
Sbjct 1190055 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTTGAGGTTGAAAGCTCC 1189996
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| ||||| || | ||| || ||| |||||||| || ||||| || || ||
Sbjct 1189995 GATACTATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAGGGAATTCCTCCGGATCAG 1189936
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| | |||| || || || || || | ||||||| | ||| | | ||||||||
Sbjct 1189935 CAAAGACTTATCTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCGGATTACAAC 1189876
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || ||||| ||||| || ||
Sbjct 1189875 ATCCAGAAAGAGTCCACACTCCA 1189853
>seq4
Length=23266485
Score = 102 bits (112), Expect = 7e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
||||||||||| || |||||||| |||||| || | |||||||| || || ||| | |||
Sbjct 12669084 GACAAAGAAGGTATACCACCTGATCAACAGAGGCTGATTTTTGCTGGTAAGCAACTTGAA 12669143
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|||| ||| || | | |||||||| || || ||||| || || || ||| | || |
Sbjct 12669144 GATGGTCGAACCTTAGCTGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTGTCTTG 12669203
Query 25212 AGGCTAAGAGGAGGAA 25227
||||| ||||| ||||
Sbjct 12669204 AGGCTTAGAGGTGGAA 12669219
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || | || |||||| ||| || | ||||| ||| ||
Sbjct 5744347 ATGCAAATCTTTGTGAAAACACTCACTGGTAAAATCATTACCCTAGAAGTTGAGAGTTCA 5744406
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || || || |||| | || || | ||| || |||||||| || || |||||
Sbjct 5744407 GATACAATTGACAACGTCA---AGGCGAAGATTCAA-GATAAAGAAGGAATCCCTCCTGA 5744462
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||| || | || ||||| || ||||| | ||||||| | | ||| | | || ||
Sbjct 5744463 CCAACAAAGGCTAATCTTTGCGGGTAAACAGCTCGAAGATGGTTGTACTCTTGCGGACTA 5744522
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||| || || || ||||| || || || || || || ||| | ||||| ||
Sbjct 5744523 CAACATCCAGAAGGAATCAACCCTCCACTTGGTTCTCAGGTTGAGAGGTGG 5744573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433181336211365
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