Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 seq1 122 7e-23 seq8 114 1e-20 seq6 114 1e-20 seq4 111 1e-19 seq5 107 2e-18 seq7 100 2e-16 >seq3 Length=27950219 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||| || || |||||| | || || || || | || ||||| || |||| | | Sbjct 5227049 GATGCAAATCTTCGTGAAAACTCTTACGGGCAAGACCATAACACTTGAGGTCGAAAGCTC 5226990 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| ||||| || | |||| || || |||||||| || || || || || || || Sbjct 5226989 CGACACCGTCGAAAACGTCAATGCCAAGATCCAAGACAAAGAAGGAATCCCTCCGGACCA 5226930 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 |||| | ||||| |||||||| |||||| | ||||| ||| ||| | | |||||||| Sbjct 5226929 ACAAAGGCTTATCTTTGCCGGTAAACAGCTCGAGGACGGCCGTACCTTGGCTGATTACAA 5226870 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| ||||| || || || | || || ||| |||| ||| | |||||| Sbjct 5226869 CATCCAAAAGGAGTCAACTCTCCACTTGGTTCTGCGTTTGAGAGGAGGT 5226821 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || |||||||| | || || ||||| || | | | Sbjct 14805974 GATGCAGATATTTGTCAAGACACTTACTGGTAAAACCATTACCCTAGAAGTCGAGAGCTC 14806033 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 | ||| | ||| || | ||| || |||||||||||||| || || || || || | Sbjct 14806034 ATACACCATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATCCCTCCGGACTA 14806093 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | || || ||||| || ||||| | |||||| || || | | ||||| || Sbjct 14806094 ACAGAGACTCATCTTTGCTGGAAAACAACTTGAGGATGGTCGAACGCTTGCGGATTATAA 14806153 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||| || ||||| ||| | ||||| || Sbjct 14806154 CATTCATAAGGAATCAACCCTGCATTTGGT 14806183 >seq1 Length=25238555 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| |||| || || || | || || || || ||| | | Sbjct 18011245 ATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTCA 18011304 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| || |||||||||||||| || |||||||| || ||| Sbjct 18011305 GACACAATTGACAATGTGAAAGCGAAGATTCAAGACAAGGAAGGAATTCCACCGGACCAA 18011364 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| ||||| || | || || | ||||||| | Sbjct 18011365 CAACGTTTGATCTTTGCAGGAAAACAATTAGAAGACGGAAGAACACTCGCTGATTACAGC 18011424 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||||| || | ||||| ||| | ||||| | ||||| Sbjct 18011425 ATCCAGAAAGAATCAACGCTTCATTTGGTTCTACGATTAAGAGGAGG 18011471 >seq8 Length=40886855 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| ||||| || || | |||||||| || |||| | || Sbjct 1190055 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTTGAGGTTGAAAGCTCC 1189996 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || |||| || || || ||||| ||||| ||||| || ||||| Sbjct 1189995 GATACTATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAGGGAATTCCTCCGGATCAG 1189936 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | ||||| || || || || ||| | || ||| | || | | ||||||||| Sbjct 1189935 CAAAGACTTATCTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCGGATTACAAC 1189876 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||| ||||| | || | || ||||| | || || ||| Sbjct 1189875 ATCCAGAAAGAGTCCACACTCCACCTTGTCTTGCGTCTTCGTGGTGGT 1189828 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || |||||||| | || ||||| ||||| | | | Sbjct 1188846 ATGCAGATATTCGTGAAGACCCTCACTGGTAAAACCATTACCCTTGAGGTGGAGAGCTCA 1188787 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| |||||||| || ||||| || ||||| Sbjct 1188786 GACACAATAGACAATGTGAAGGCTAAGATTCAGGACAAGGAAGGGATTCCTCCGGATCAG 1188727 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| || ||||| || || | || ||| | || | | ||||||||| Sbjct 1188726 CAGAGACTTATCTTCGCCGGTAAGCAACTTGAAGATGGAAGGACTCTTGCGGATTACAAC 1188667 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || ||||| || | ||||| ||| Sbjct 1188666 ATCCAGAAGGAATCGACTCTTCATTTGGTT 1188637 >seq6 Length=37079636 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || || ||||| || || |||||||||| ||||| | | | Sbjct 13447915 ATGCAGATTTTCGTTAAGACCTTGACCGGGAAGACAATCACTCTTGAGGTGGAGAGCTCA 13447974 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||||||||| || ||||| || || Sbjct 13447975 GACACAATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAG 13448034 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || ||| | |||||| || || | | || ||||| Sbjct 13448035 CAGCGTCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTCGGACTTTGGCTGACTACAAT 13448094 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||| |||| | || ||||| | || || ||| Sbjct 13448095 ATTCAGAAGGAGTCCACATTACACCTGGTGTTGCGTCTCCGTGGTGGT 13448142 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||| | || ||||| || || | || ||||||||| | || || ||||| || | | | Sbjct 33564855 GATGTAGATATTTGTCAAGACACTTACTGGTAAAACGATTACCCTAGAAGTCGAGAGCTC 33564914 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | ||| || | ||| ||||||||||||||||| || || || || || || Sbjct 33564915 AGACACCATTGACAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCGGACCA 33564974 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || |||||||| || ||| | |||||| || || | | |||||||| Sbjct 33564975 GCAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGAACTCTTGCGGATTACAA 33565034 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || || ||||| ||| | || || || | | ||| | |||||| Sbjct 33565035 CATCCAGAAGGAATCAACCCTCCACTTGGTCCTCAGGTTGAGAGGAGGT 33565083 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| | || |||||||| | || || ||||| || | | | Sbjct 33565084 ATGCAGATCTTTGTGAAAACCCTCACTGGTAAAACTATTACCCTAGAAGTTGAGAGCTCA 33565143 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || |||||||||||||| || || || || || ||| Sbjct 33565144 GACACCATTGACAACGTCAAGGCGAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAA 33565203 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || ||||| | |||||| || || | | ||||| ||| Sbjct 33565204 CAGAGACTCATCTTTGCTGGAAAACAACTTGAGGATGGTCGAACGCTTGCGGATTATAAC 33565263 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || ||||| ||| | ||||| || Sbjct 33565264 ATTCAGAAGGAATCAACCCTGCATTTGGT 33565292 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || |||||||| || |||| | ||||| |||| | || Sbjct 19970215 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACCATCACCTTGGAAGTTGAAAGCTCC 19970156 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| ||||| || ||||| ||||||||||| || || || Sbjct 19970155 GACACCATTGACAACGTCAAGGCCAAAATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 19970096 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||| || || | ||||| | | || | |||| ||||| Sbjct 19970095 CAAAGATTGATTTTCGCCGGAAAGCAACTCGAGGACGGCAGAACTCTGGCCGACTACAAT 19970036 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||| || || | ||||| || ||||| | || || ||| Sbjct 19970035 ATCCAGAAAGAGTCTACTCTCCATTTGGTGTTGCGTCTACGTGGTGGT 19969988 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | ||||| || || |||| |||||||| || | | | Sbjct 13448143 ATGCAGATTTTCGTGAAGACTCTTACCGGCAAGACAATCACACTTGAAGTTGAGAGCTCT 13448202 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | || || || || || ||||| ||||||||||| || || Sbjct 13448203 GATACTATTGATAACGTGAAGGCCAAGATCCAGGATAAGGAAGGTATTCCACCGGACCAG 13448262 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| || || | | ||||||||| Sbjct 13448263 CAGCGTCTAATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGTACACTGGCGGATTACAAC 13448322 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 ||||| ||||| || ||| | || || || | || | || || ||||| Sbjct 13448323 ATTCAGAAAGAGTCGACCCTCCACTTGGTCCTCCGTCTCCGTGGTGGTTT 13448372 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || || || ||||| || | ||||| || ||||| | | | Sbjct 13447687 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACTCTCGAGGTGGAGAGCTCT 13447746 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||| || ||||| ||||| ||||||||||| || || Sbjct 13447747 GACACTATTGACAACGTGAAGGCAAAGATCCAAGATAAGGAAGGTATTCCACCGGACCAG 13447806 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| | |||||| || ||| | | || ||||| Sbjct 13447807 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCTGACTACAAT 13447866 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || || || | || || || ||||| | || || ||| Sbjct 13447867 ATCCAAAAGGAGTCTACATTGCACTTGGTGTTGCGTCTTCGGGGTGGT 13447914 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || ||||| || || || ||| | |||||||| || |||| | | Sbjct 33565311 GATGCAGATATTTGTCAAGACTTTGACGGGAAAGACGATAACTCTTGAGGTCGAAAGCTC 33565370 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | ||| || | ||| || |||||||| ||||| || || || || || || Sbjct 33565371 GGATACAATTGACAATGTGAAAGCGAAGATTCAAGATAAGGAAGGGATCCCTCCGGACCA 33565430 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| || ||||| | || ||| || || | | || ||||| Sbjct 33565431 GCAGAGGCTAATCTTTGCGGGAAAACAACTCGAAGATGGTCGGACATTAGCGGACTACAA 33565490 Query 22398 CATTCAAAAAGAATCCAC 22415 |||||| ||||| || || Sbjct 33565491 CATTCAGAAAGAGTCAAC 33565508 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 ||||| || |||| ||| || || ||| | |||||||| || |||| | | ||||| | Sbjct 33830262 TTTGTCAAGACTTAAACGGGAAAGACGATAACTCTTGAGGTCGAAAGCTCGGATACAATT 33830203 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || | ||| || |||||||| ||||| || || || || || || || | || Sbjct 33830202 GACAATGTGAAAGCGAAGATTCAAGATAAGGAAGGGATCCCTCCGGACCAGCAGAGGCTA 33830143 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407 || ||||| || ||||| | || ||| || || | | || ||||||||||| ||| Sbjct 33830142 ATCTTTGCGGGAAAACAACTCGAAGATGGTCGGACATTAGCGGACTACAACATTCAGAAA 33830083 Query 22408 GAATCCAC 22415 || || || Sbjct 33830082 GAGTCAAC 33830075 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || | ||| | ||||| |||| | || Sbjct 13447395 ATGCAGATCTTTGTCAAGACCTTGACGGGCAAGACCATTACTTTGGAAGTTGAAAGCTCC 13447454 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||| || |||||||| ||||||||||| || || || Sbjct 13447455 GATACTATTGATAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 13447514 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || ||||| || ||| | || || | | || | | ||||||||| Sbjct 13447515 CAGAGATTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCAGAACTTTGGCTGATTACAAC 13447574 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||| || | ||||| || ||||| | || || ||| Sbjct 13447575 ATCCAGAAAGAGAGTACTCTTCATTTGGTGTTGCGTCTACGTGGTGGT 13447622 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || ||||| || | || || || || || | | | Sbjct 19969987 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTCGAGAGCTCA 19969928 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || || ||||| || || || || || || || Sbjct 19969927 GACACTATTGACAACGTCAAGGCCAAGATCCAGGACAAAGAAGGGATCCCTCCGGACCAG 19969868 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || ||| | |||||| || ||| | |||| |||||| Sbjct 19969867 CAGCGTCTCATTTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACCTTAGCCGACTACAAC 19969808 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || ||| | || || || ||||| | || || ||| Sbjct 19969807 ATTCAGAAGGAGTCGACCCTTCACTTGGTCTTGCGTCTTCGTGGTGGT 19969760 >seq4 Length=23266485 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || || ||||| |||| || || ||| ||||||| || || ||| | Sbjct 22703432 AAAGATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATCACTCTCGAGGTTGAATC 22703373 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 ||||||| | ||| || |||| || || ||||||||||| || || ||||| || Sbjct 22703372 ATCCGATACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGA 22703313 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||||||||| | || || ||||| ||||| | || || || || | | || || Sbjct 22703312 TCAACAACGATTAATCTTCGCCGGAAAACAACTCGAAGACGGACGTACTCTGGCTGACTA 22703253 Query 22395 CAACATTCAAAAAGAATCCAC 22415 |||||| || || ||||| || Sbjct 22703252 CAACATCCAGAAGGAATCAAC 22703232 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || |||||||| | || || ||||| || | | | Sbjct 5738463 ATGCAGATATTTGTCAAGACGCTTACTGGTAAAACTATTACCCTAGAAGTTGAGAGCTCA 5738522 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| || |||||||||||||| || || || | || ||| Sbjct 5738523 GACACTATTGACAACATCAAGGCGAAGATTCAAGACAAGGAAGGAATCCCTCTGGACCAA 5738582 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||| |||| ||||| |||||||| || || | | || |||||| Sbjct 5738583 CAGAGGCTAATCTTTACCGGAAAACAACTAGAGGATGGTCGGACTTTAGCGGACTACAAC 5738642 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| ||||| || || Sbjct 5738643 ATTCAGAAAGAGTCAAC 5738659 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||| |||||| | || || ||||| || | | | Sbjct 5744743 ATGCAGATATTTGTCAAGACGCTTACCAATAAAACCATTACCCTAGAAGTTGAGAGCTCA 5744802 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | ||| || |||||||||||||| || || || || || || Sbjct 5744803 GACACCATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGGATCCCTCCGGAACAG 5744862 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 | | ||||| ||||| || |||||| | |||||| ||| || | | || |||||| Sbjct 5744863 AAGAGACTTATCTTTGCGGGTAAACAGCTCGAGGATGGCCGTACTCTTGCGGACTACAAC 5744922 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| || || || Sbjct 5744923 ATCCAAAAGGAGTCAAC 5744939 >seq5 Length=22804910 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || || ||||| |||| || || || ||||||| || || ||| | Sbjct 22133576 AGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACTCTCGAGGTTGAATCAT 22133635 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | |||||| | ||| || ||||| || || ||||||||||| || || ||||| || | Sbjct 22133636 CAGATACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACC 22133695 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | |||||| | || || || || ||||| | || || || || || | || |||| Sbjct 22133696 AGCAACGTTTAATCTTCGCTGGAAAACAACTCGAAGACGGACGTACTCTCGCTGACTACA 22133755 Query 22397 ACATTCAAAAAGAATCCAC 22415 |||| || |||||||| || Sbjct 22133756 ACATCCAGAAAGAATCAAC 22133774 >seq7 Length=29178675 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||| |||||||| ||| | || || || || | || || || || |||| | | Sbjct 2570385 GATGCAAATCTTTGTTAAGACTCTTACAGGCAAGACCATAACCCTCGAGGTCGAAAGCTC 2570444 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | |||||| |||| || || ||||| ||||| || || || || || | Sbjct 2570445 AGAAACCATTGACGATGTCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCGGACGA 2570504 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | ||||| || || || ||||| | |||||| || || | | |||||||| Sbjct 2570505 ACAGAGGCTTATCTTCGCTGGTAAACAACTCGAGGATGGTCGTACACTTGCGGATTACAA 2570564 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||| || || || || || |||| | ||| | || || ||||| || Sbjct 2570565 CATCCAGAAGGAGTCAACTCTACACCTTGTTCTTCGTTTACGCGGTGG 2570612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419585939254615