Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4 170 5e-37 seq5 167 6e-36 seq1 141 2e-28 seq6 125 2e-23 seq3 107 5e-18 seq8 102 2e-16 seq7 102 2e-16 >seq4 Length=23266485 Score = 170 bits (188), Expect = 5e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| |||||||||| ||| ||| || ||||| || ||||| || Sbjct 22703202 CCACCACGAAGACGAAGGACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCAGCC 22703261 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||||||||| | ||||||||| |||||||| | || |||||| |||| Sbjct 22703262 AGAGTACGTCCGTCTTCGAGTTGTTTTCCGGCGAAGATTAATCGTTGTTGATCCGGTGGG 22703321 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || || ||||| || || || || || || || | |||| ||||| || Sbjct 22703322 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTATCGGATGATTCAACC 22703381 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||||||||||||| || || || || ||||| |||||||| Sbjct 22703382 TCGAGAGTGATCGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 22703428 Score = 107 bits (118), Expect = 5e-18 Identities = 166/235 (71%), Gaps = 14/235 (6%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || || |||| || ||||| || || || ||||| || Sbjct 5738690 TCCACCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGC 5738631 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTG----AGAAT 288361 | || || || || |||| ||||||||| | ||||| || | |||||| ||| Sbjct 5738630 TAAAGTCCGACCATCCTCTAGTTGTTTTCCGGTAAAGATTAGCCTCTGTTGGTCCAGA-- 5738573 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||||||||| || || || || ||||| || | ||| || |||| || |||| Sbjct 5738572 --GGGATTCCTTCCTTGTCTTGAATCTTCGCCTTGATGTTGTCAATAGTGTCTGAGCTC- 5738516 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || || || || || || || |||||||| ||||||||||| Sbjct 5738515 --TCAACTTCTAGGGTAATAGTTTTACCAGTAAGCGTCTTGACAAATATCTGCAT 5738463 Score = 84.2 bits (92), Expect = 5e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || ||||| || || || | || ||||| | ||||| || || || Sbjct 5744538 TTCCTTCTGGATGTTGTAGTCCGCAAGAGTACAACCATCTTCGAGCTGTTTACCCGCAAA 5744479 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | ||||| | ||||||||||||||||| || || ||||| || ||||| Sbjct 5744478 GATTAGCCTTTGTTGGTCAGGAGGGATTCCTTCTTTATCTTGAATCTTCGCCTTGACGTT 5744419 Query 288402 TTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || || | ||| ||||| || || || | || || || || || || Sbjct 5744418 GTCAATTGTAT--CTGAACTCTCAACTTCTAGGGTAATGATTTTACCAGTGAGTGTTTTC 5744361 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 5744360 ACAAAGATTTGCAT 5744347 >seq5 Length=22804910 Score = 167 bits (184), Expect = 6e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || ||||||| ||| |||||| ||||| || ||||| ||| Sbjct 22133804 CCACCACGAAGACGAAGGACAAGATGAAGCGTTGATTCTTTCTGGATGTTGTAGTCAGCG 22133745 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||||||||| | ||||||||| |||||||| | ||| || || |||| Sbjct 22133744 AGAGTACGTCCGTCTTCGAGTTGTTTTCCAGCGAAGATTAAACGTTGCTGGTCCGGTGGG 22133685 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || || ||||| || ||||| || || || || | ||| ||||| || Sbjct 22133684 ATTCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTATCTGATGATTCAACC 22133625 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 22133624 TCGAGAGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 22133578 >seq1 Length=25238555 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||||| ||| |||||| ||||| | || || ||||| || | ||||||| Sbjct 18011456 AGAACCAAATGAAGCGTTGATTCTTTCTGGATGCTGTAATCAGCGAGTGTTCTTCCGTCT 18011397 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 ||||||||||||||||| ||||||| ||| ||||| ||| |||||||| || || Sbjct 18011396 TCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGGTCCGGTGGAATTCCTTCCTTGTCT 18011337 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 || || ||||||||||| || || || | || ||||| || || || || || ||| Sbjct 18011336 TGAATCTTCGCTTTCACATTGTCAATTGTGTCTGAAGATTCAACCTCTAGGGTTATTGTC 18011277 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || || || || || || ||||||||| Sbjct 18011276 TTCCCCGTTAGGGTTTTCACAAAGATCTGCATT 18011244 >seq6 Length=37079636 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| || || || || || || || || || || || || | || || || |||||| Sbjct 13448333 TCTTTCTGAATGTTGTAATCCGCCAGTGTACGACCATCCTCAAGCTGCTTACCAGCGAAG 13448274 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||| || ||||| ||||||||||| || || |||||||| Sbjct 13448273 ATTAGACGCTGCTGGTCCGGTGGAATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTA 13448214 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || |||| ||| |||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 13448213 TCAATAGTATCAGAGCTC---TCAACTTCAAGTGTGATTGTCTTGCCGGTAAGAGTCTTC 13448157 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 13448156 ACGAAAATCTGCAT 13448143 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || || |||| || ||||| || || || ||||| || Sbjct 33565539 TCCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGC 33565480 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || ||||| | ||||||||| || ||||| || | ||| || || Sbjct 33565479 TAATGTCCGACCATCTTCGAGTTGTTTTCCCGCAAAGATTAGCCTCTGCTGGTCCGGAGG 33565420 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTC 288422 ||| ||||| ||||| || || ||||||||||| || || || | ||| ||| ||| Sbjct 33565419 GATCCCTTCCTTATCTTGAATCTTCGCTTTCACATTGTCAATTGTATC---CGAGCTTTC 33565363 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || |||| ||||||||| ||||||||||| Sbjct 33565362 GACCTCAAGAGTTATCGTCTTTCCCGTCAAAGTCTTGACAAATATCTGCAT 33565312 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | | || || || | ||| || || || ||||| ||||| || Sbjct 13448141 CCACCACGGAGACGCAACACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAGCC 13448082 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || | || |||||||| ||||| |||||||| || |||| Sbjct 13448081 AAAGTCCGACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGGG 13448022 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||| || || |||||||| || || ||||| || || || | || |||| || Sbjct 13448021 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTC---TCC 13447965 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||||||||||| ||||| ||||| |||||||| Sbjct 13447964 ACCTCAAGAGTGATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| |||||||| || || | ||||| || | ||| ||||| ||||| Sbjct 19970025 TCTTTCTGGATATTGTAGTCGGCCAGAGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAA 19970084 Query 288343 ATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | |||| | | | || || || ||||| ||||||||||| || || ||| Sbjct 19970085 ATCAATCTTTGCTGGTCCGGA---GGAATACCCTCTTTGTCCTGGATTTTGGCCTTGACG 19970141 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| ||||| | ||||| ||||| ||||||| |||||| Sbjct 19970142 TTGTCAATGGTGTCGGAGCTTTCAACTTCCAAGGTGATGGTCTTACCGGTCAAGGTCTTG 19970201 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 19970202 ACAAAGATCTGCAT 19970215 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || |||||||| | || || || || || | || ||||| || || Sbjct 19969797 TCCTTCTGAATGTTGTAGTCGGCTAAGGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAA 19969856 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||||| |||||||| |||||||| || || || ||||| Sbjct 19969857 ATGAGACGCTGCTGGTCCGGAGGGATCCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTG 19969916 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || |||| || |||| || || ||||| || || ||||| || |||| |||||| Sbjct 19969917 TCAATAGTGTCTGAGCTC---TCGACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTG 19969973 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 19969974 ACGAAGATCTGCAT 19969987 Score = 100 bits (110), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || || || ||||||| || || || |||||||| || || || Sbjct 13447393 CCACCACGAAGCCTGAGCACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCCGCA 13447334 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || ||||| |||||||||| | ||| ||| || Sbjct 13447333 AGAGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGAGGA 13447274 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||| || || || ||||||||||| || || | || ||| || Sbjct 13447273 ATACCTTCCTTATCTTGAATCTTAGCTTTCACGTTATCGATGGTGTCAGAACTC---TCA 13447217 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || || || || |||| ||||| || || |||||||| Sbjct 13447216 ACCTCGAGAGTAATAGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13447167 Score = 100 bits (110), Expect = 7e-16 Identities = 156/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || || |||| || ||||| || || || ||||| || Sbjct 33830044 TCCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGC 33830103 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || || ||||| | ||||||||| || ||||| || | ||| || || Sbjct 33830104 TAATGTCCGACCATCTTCGAGTTGTTTTCCCGCAAAGATTAGCCTCTGCTGGTCCGGAGG 33830163 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||| ||||| ||||| || || ||||||||||| || || || | ||| ||| ||| Sbjct 33830164 GATCCCTTCCTTATCTTGAATCTTCGCTTTCACATTGTCAATTGTATCCGAGCT---TTC 33830220 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || || || || |||||||| || || ||||||||| || Sbjct 33830221 GACCTCAAGAGTTATCGTCTTTCCCGTTTAAGTCTTGACAAA 33830262 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||||||||| ||||| || | || || || || || | || ||||| || ||| Sbjct 13447877 TCCTTTTGGATATTGTAGTCAGCCAAGGTACGACCATCCTCAAGCTGCTTTCCGGCAAAG 13447818 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || ||| || ||||| ||||| ||||| || || |||||||| Sbjct 13447817 ATCAACCTCTGCTGGTCCGGTGGAATACCTTCCTTATCTTGGATCTTTGCCTTCACGTTG 13447758 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || |||| || |||| || || ||||| || || ||||| || |||| ||||| Sbjct 13447757 TCAATAGTGTCAGAGCTC---TCCACCTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTA 13447701 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 13447700 ACGAAGATTTGCAT 13447687 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || || || || || || || || || || | || || || || || Sbjct 33565047 TTCCTTCTGGATGTTGTAATCCGCAAGAGTTCGACCATCCTCGAGCTGCTTACCGGCAAA 33564988 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||| | ||| || ||||||||||| || || || ||||| ||||| || || Sbjct 33564987 GATCAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATT 33564928 Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | || |||| || ||||| || || ||||| || || || || ||||| Sbjct 33564927 GTCAATGGTGTCTGAGCTC---TCGACTTCTAGGGTAATCGTTTTACCAGTAAGTGTCTT 33564871 Query 288459 GACGAATATCTGCAT 288473 ||| ||||||| ||| Sbjct 33564870 GACAAATATCTACAT 33564856 >seq3 Length=27950219 Score = 107 bits (118), Expect = 5e-18 Identities = 165/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || |||| || ||| ||||||||||| || || || Sbjct 5226594 CCACCACGAAGACGAAGAACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCCGCA 5226653 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || || || || |||| ||||| || || ||||| || | |||||| || || Sbjct 5226654 AGAGTACGACCATCCTCTAGCTGTTTACCGGCAAAGATAAGTCTCTGTTG---GTCCGGA 5226710 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||||||||||||| ||||| || ||||| ||||| || || | || ||| | Sbjct 5226711 GAGATTCCTTCTTTATCTTGGATCTTGGCTTTGACGTTGTCAATGGTGTCTGAGCT---T 5226767 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || || || || || || || || || || || ||||| Sbjct 5226768 TCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGGTTTTCACAAAGATTTGCAT 5226820 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 12/198 (6%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || ||||| || || ||||| || || || || | ||||||||| || || Sbjct 14806166 TTCCTTATGAATGTTATAATCCGCAAGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAA 14806107 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| || | ||||| | || || ||||||||| || || || || || ||||| || Sbjct 14806106 GATGAGTCTCTGTT---AGTCCGGAGGGATTCCTTCCTTGTCTTGAATCTTAGCTTTAAC 14806050 Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 || || || | | |||| || ||||| || || || || || || || || || Sbjct 14806049 ATTGTCAATGGTGTATGAGCTC---TCGACTTCTAGGGTAATGGTTTTACCAGTAAGTGT 14805993 Query 288456 CTTGACGAATATCTGCAT 288473 |||||| ||||||||||| Sbjct 14805992 CTTGACAAATATCTGCAT 14805975 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || || || | || || ||||| || | ||||| || || ||| Sbjct 5226858 TCCTTTTGGATGTTGTAATCAGCCAAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAG 5226917 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||||| |||||||||||||| || ||||| || || || |||||| Sbjct 5226918 ATAAGCCTTTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGGATCTTGGCATTGACGTTT 5226977 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | | ||| ||| || || || || || ||||| || || ||||| || ||| Sbjct 5226978 TCGACGGTGTCGGAGCTTTCGACCTCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACG 5227037 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 5227038 AAGATTTGCAT 5227048 >seq8 Length=40886855 Score = 102 bits (112), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| || | ||||| || ||| || ||||| || || || || Sbjct 1188619 TCCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGC 1188678 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | ||| ||||| | ||| || || |||||||| || | ||| ||| || Sbjct 1188679 AAGAGTCCTTCCATCTTCAAGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGG 1188738 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || ||||| || ||||| || || || ||||| || ||||| | || |||| || Sbjct 1188739 AATCCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTC---TC 1188795 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || || || || ||||| |||||||||||||| Sbjct 1188796 CACCTCAAGGGTAATGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 1188846 >seq7 Length=29178675 Score = 102 bits (112), Expect = 2e-16 Identities = 93/116 (80%), Gaps = 6/116 (5%) Strand=Plus/Minus Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||||| |||||||| || || || ||||| ||||| ||||| || | ||| ||| Sbjct 2571181 CTGGGATCCCTTCTTTCTCTTGAATCTTCGCCTTCACATTTTCAATCGTATCAGAGCT-- 2571124 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| ||||| |||||||||||||| || ||| ||||||||| |||||||||||| Sbjct 2571123 -TTCGACTTCAAGCGTGATCGTCTTTCCCTTCAAAGTCTTGACAAATATCTGCATT 2571069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179234660163738