Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 seq3 113 5e-20 seq8 104 2e-17 seq1 95.1 1e-14 seq4 89.7 5e-13 seq7 86.0 6e-12 >seq6 Length=37079636 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 ||||| || ||||||||||| || | || | |||||||||||||||| ||||| | Sbjct 13447585 TCTTTCTGGATGTTGTAATCAGCCAAAGTTCTGCCGTCTTCAAGCTGCTTACCGGCGAAG 13447526 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || | | ||||||||| |||||||| || ||||| ||||| || ||| ||| ||| Sbjct 13447525 ATCAATCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTA 13447466 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||||| | || ||||| | ||| | ||||||||| ||||| || || || Sbjct 13447465 TCAATAGTATCGGAGCTTTCAACTTCCAAAGTAATGGTCTTGCCCGTCAAGGTCTTGACA 13447406 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 13447405 AAGATCTGCAT 13447395 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| || ||||| || || | ||| || | || ||||||||||| ||| Sbjct 13447883 GTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTACGACCATCCTCAAGCTGCTTTCCG 13447824 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | || ||||||||| || ||||| ||||| || ||||| || ||| ||| Sbjct 13447823 GCAAAGATCAACCTCTGCTGGTCCGGTGGAATACCTTCCTTATCTTGGATCTTTGCCTTC 13447764 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| | ||||| || | ||| | |||||| || ||||| || Sbjct 13447763 ACGTTGTCAATAGTGTCAGAGCTCTCCACCTCGAGAGTAATGGTCTTACCAGTCAAGGTC 13447704 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 13447703 TTAACGAAGATTTGCAT 13447687 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| ||||| |||||||||||||| || | || || | || ||||||||||| || Sbjct 13448339 GTCGACTCTTTCTGAATGTTGTAATCCGCCAGTGTACGACCATCCTCAAGCTGCTTACCA 13448280 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||||||||| || ||||| ||||| || || || || || ||| Sbjct 13448279 GCGAAGATTAGACGCTGCTGGTCCGGTGGAATACCTTCCTTATCCTGGATCTTGGCCTTC 13448220 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | |||||| | || ||||| | || | ||||||||||| | ||| Sbjct 13448219 ACGTTATCAATAGTATCAGAGCTCTCAACTTCAAGTGTGATTGTCTTGCCGGTAAGAGTC 13448160 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 13448159 TTCACGAAAATCTGCAT 13448143 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || || ||||||||||| || || | ||| || | || ||||||||| Sbjct 19969785 TGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCTAAGGTCCGACCATCCTCAAGCTGC 19969844 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| ||||||| ||||||||||| ||||| || |||||||| || || || || Sbjct 19969845 TTTCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGGATCCCTTCTTTGTCCTGGATCTTG 19969904 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || || | || || || | || | |||||| || ||| Sbjct 19969905 GCCTTGACGTTGTCAATAGTGTCTGAGCTCTCGACCTCGAGGGTAATGGTCTTACCAGTC 19969964 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 || || || ||||| || ||||| Sbjct 19969965 AAGGTCTTGACGAAGATCTGCAT 19969987 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || ||||| ||||||||||| || || | || || | ||| Sbjct 33565523 AGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCT 33565464 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || || || ||| | || |||| ||||||||| ||||| || ||||| || ||| Sbjct 33565463 TCGAGTTGTTTTCCCGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCT 33565404 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | || ||||| ||| || | |||||| | || || || | ||||| || Sbjct 33565403 TG-AATCTTCGCTTTCACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTATCGT 33565345 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || |||||||| || || || || ||||| Sbjct 33565344 CTTTCCCGTCAAAGTCTTGACAAATATCTGCAT 33565312 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| || || | || || || || ||||| ||||| || || | || || | || || Sbjct 13448124 CACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAGCCAAAGTCCGACCATCCTC 13448065 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 ||||||||| || ||| | ||||| ||||||||||| || || ||||| || || || || Sbjct 13448064 AAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTG 13448005 Query 64354 TATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 || || ||| ||| || | ||| || | ||||| || | ||| | ||||| Sbjct 13448004 GATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCCACCTCAAGAGTGATTGTCTT 13447945 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| || || |||||||| ||||| Sbjct 13447944 CCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915 Score = 100 bits (110), Expect = 3e-16 Identities = 114/152 (75%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || || || | || | || ||||| || || ||||||||||| || Sbjct 33565083 ACCTCCTCTCAACCTGAGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATCCGC 33565024 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || || |||||||| |||||| | || |||| ||||||||| ||||| Sbjct 33565023 AAGAGTTCGACCATCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAGG 33564964 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTA 64367 |||||||| || ||||| | |||| |||||| Sbjct 33564963 GATTCCTTCCTTGTCTTG-AATTTTAGCTTTA 33564933 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||||| || || || || || |||||||| || || Sbjct 19970216 ACCTCCACGAAGCCTGAGGACAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGC 19970275 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| ||||| ||||| |||||| | || | || |||||| || ||||| Sbjct 19970276 AAGAGTACGACCGTCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGG 19970335 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||| || || ||||| || || ||| || || | || ||| || || Sbjct 19970336 AATTCCCTCCTTGTCTTGGATCTTAGCCTTAACGTTATCAATGGTGTCAGAACTCTCAAC 19970395 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || ||||| || || ||||| || ||||| Sbjct 19970396 CTCGAGGGTAATAGTCTTACCAGTCAAGGTCTTAACGAAGATCTGCAT 19970443 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || ||||| ||||||||||| || || | || || | ||| Sbjct 33830060 AGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCT 33830119 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || || || ||| | || |||| ||||||||| ||||| || ||||| || ||| Sbjct 33830120 TCGAGTTGTTTTCCCGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCT 33830179 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | || ||||| ||| || | |||||| | || || || | ||||| || Sbjct 33830180 TG-AATCTTCGCTTTCACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTATCGT 33830238 Query 64411 CTTGCCGGTCAAAGTTTTTACGAA 64434 ||| || || |||| || || || Sbjct 33830239 CTTTCCCGTTTAAGTCTTGACAAA 33830262 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || ||||| ||||||| || || || || || || |||||||| || Sbjct 13447394 ACCACCACGAAGCCTGAGCACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCCGC 13447335 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| ||||||||||| || || | || | || |||||| || ||||| Sbjct 13447334 AAGAGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGAGG 13447275 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| || ||||| || || Sbjct 13447274 AATACCTTCCTTATCTTGAATCTT 13447251 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || || | ||||| | || |||||||| || || Sbjct 19969563 GTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGTTTACCA 19969622 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||||||||| || || || ||||| || || || || || ||| Sbjct 19969623 GCGAAGATTAGACGCTGCTGGTCCGGTGGGATACCTTCCTTGTCCTGGATCTTAGCCTTG 19969682 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||| ||| | || ||||| | || | |||||| || || | ||| Sbjct 19969683 ACATTGTCAATTGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTTTCCAGTAAGAGTC 19969742 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 19969743 TTCACGAAAATCTGCAT 19969759 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 64250 GATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCA 64309 || || |||||||| ||||||| | | || || | || || |||||| | |||||| Sbjct 34014151 GACTCCTTTTGAATATTGTAATACACAAGAGTACGGCCATCCTCGAGCTGCCTACCGGCA 34014210 Query 64310 TAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACA 64369 || || || ||| ||| ||| | ||||||||||| ||||| || ||| ||| ||| Sbjct 34014211 TAGATAAGTGTATGCACGTCCGGATGGATTCCTTCTTTATCTTGAATCTTTACCTTGACA 34014270 Query 64370 ACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTT 64429 || | ||| || | || || | | |||| ||||||||| | ||||| ||| Sbjct 34014271 TTGTCAATTGTGTCGGAGCTTTCAACGTTAAGGGTTATGGTCTTGCCTGGAAAAGTCTTT 34014330 Query 64430 ACGAAAATTTGCAT 64443 ||||| |||||||| Sbjct 34014331 ACGAAGATTTGCAT 34014344 >seq3 Length=27950219 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| ||||||||||| || | ||| || |||| || ||||| || ||| Sbjct 5226852 GTTGACTCCTTTTGGATGTTGTAATCAGCCAAGGTACGGCCGTCCTCGAGCTGTTTACCG 5226911 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| || ||||| ||||| ||||||||||| ||||| || || || Sbjct 5226912 GCAAAGATAAGCCTTTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGGATCTTGGCATTG 5226971 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || || || || | || || || | |||| ||||||||| || | |||| Sbjct 5226972 ACGTTTTCGACGGTGTCGGAGCTTTCGACCTCAAGTGTTATGGTCTTGCCCGTAAGAGTT 5227031 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 5227032 TTCACGAAGATTTGCAT 5227048 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || ||||| ||||| || |||||||| || | || || | || Sbjct 5226608 AAGAACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCCGCAAGAGTACGACCATC 5226667 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||| || |||||| | || || | ||| ||||| |||| ||||||||||| || Sbjct 5226668 CTCTAGCTGTTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGAGATTCCTTCTTTATC 5226727 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 ||| | | || ||||| || || | || || | || || || | |||| || Sbjct 5226728 TTGGA-TCTTGGCTTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCGAGTGTTATGG 5226786 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | ||||| || | ||||| || || |||||||| Sbjct 5226787 TTTTGCCAGTTAGGGTTTTCACAAAGATTTGCAT 5226820 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| ||||| | || || || || || ||||| || || |||| || | | || Sbjct 16879367 AAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTATAGTCAGCGAGTGTCCTTCCATC 16879308 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||||||| ||||| | ||||| | ||||| ||| || || |||| ||| || || Sbjct 16879307 TTCAAGCTGCTTACCGGCGAATATGAGTCTCTGCTCGTCCGGTGGGATTCATTCCTTGTC 16879248 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || | || ||||| | || | ||| Sbjct 16879247 CTGGATCTTAGCCTTGACGTTGTCAATAGTGTCGAAGCTTTCAACTTCGAGGGTAATGGT 16879188 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| ||||||| || || ||||| ||||| Sbjct 16879187 CTTGCCTATCAAAGTCTTCACAAAAATCTGCAT 16879155 >seq8 Length=40886855 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| || | || | | |||||||||||||| || Sbjct 1189859 GTGGACTCTTTCTGGATGTTGTAATCCGCAAGAGTCCTTCCATCTTCAAGCTGCTTACCA 1189918 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || | ||||| || ||||||||||| ||||| || || || || ||| Sbjct 1189919 GCGAAGATAAGTCTTTGCTGATCCGGAGGAATTCCCTCTTTGTCCTGGATCTTAGCCTTG 1189978 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| | || || || | ||| | |||||| ||||||||||| Sbjct 1189979 ACATTATCAATAGTATCGGAGCTTTCAACCTCAAGAGTAATGGTCTTTCCGGTCAAAGTC 1190038 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 1190039 TTGACAAAGATTTGCAT 1190055 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||||| |||||||| || || ||||||||||| || | || | | || Sbjct 1188634 AAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCAAGAGTCCTTCCATC 1188693 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| ||||| ||||| | || || | |||||| || |||||||| ||||| || || Sbjct 1188694 TTCAAGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTGTC 1188753 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | ||| || | ||||| || | || | ||| Sbjct 1188754 CTGAATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACCTCAAGGGTAATGGT 1188813 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || ||||| || ||||| Sbjct 1188814 TTTACCAGTGAGGGTCTTCACGAATATCTGCAT 1188846 >seq1 Length=25238555 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 |||| || || | ||||| ||| |||||||| || ||| ||||||| |||| || | Sbjct 18011462 AATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGCTGTAATCAGCGAGTGTTCTT 18011403 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 ||||||| | || || || ||| | || | || || ||||| || ||||||||||| Sbjct 18011402 CCGTCTTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGGTCCGGTGGAATTCCTTCC 18011343 Query 64346 TTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGT 64404 || ||||| | | || ||||| ||| || | ||| || | || || |||| || Sbjct 18011342 TTGTCTTG-AATCTTCGCTTTCACATTGTCAATTGTGTCTGAAGATTCAACCTCTAGGGT 18011284 Query 64405 TACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTT 64445 || ||||| || || | ||||| || || || ||||||| Sbjct 18011283 TATTGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTT 18011243 >seq4 Length=23266485 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || || ||||| || ||||||||||| || | ||| || | |||||| Sbjct 12669199 ACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCTAAGGTTCGACCATCTTCA 12669140 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || ||||| || ||| |||| |||| ||| || || || || || |||||||| || | | Sbjct 12669139 AGTTGCTTACCAGCAAAAATCAGCCTCTGTTGATCAGGTGGTATACCTTCTTTGTCCTAT 12669080 Query 64355 ATTT 64358 | || Sbjct 12669079 AATT 12669076 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || || || | || | || ||||| || || |||||||| || || Sbjct 5744574 ACCACCTCTCAACCTGAGAACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCCGC 5744515 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| ||||| || || ||| | || |||| || ||||| ||||| Sbjct 5744514 AAGAGTACAACCATCTTCGAGCTGTTTACCCGCAAAGATTAGCCTTTGTTGGTCAGGAGG 5744455 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||||| ||||| || || ||| || || | |||||| || || Sbjct 5744454 GATTCCTTCTTTATCTTGAATCTTCGCCTTGACGTTGTCAATTGTATCTGAACTCTCAAC 5744395 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | | | || || || | ||||| || || |||||||| Sbjct 5744394 TTCTAGGGTAATGATTTTACCAGTGAGTGTTTTCACAAAGATTTGCAT 5744347 >seq7 Length=29178675 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||| || | ||| || || || | || || || || || ||||||||||| || Sbjct 2570612 CCACCGCGTAAACGAAGAACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCA 2570553 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | || || || || || || || | || |||| ||| | ||| ||||| Sbjct 2570552 AGTGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGTTCGTCCGGAGGG 2570493 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || ||||| || ||||| || || ||| ||| | || | || || | || || Sbjct 2570492 ATCCCTTCCTTATCTTGGATCTTCGCCTTGACATCGTCAATGGTTTCTGAGCTTTCGACC 2570433 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | |||| ||||||||| || | ||| || || || |||||||| Sbjct 2570432 TCGAGGGTTATGGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 2570386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499471354553240