Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 136 4e-27 seq6 111 2e-19 seq4 109 5e-19 seq5 96.9 3e-15 seq7 95.1 1e-14 >seq3 Length=27950219 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| |||||||| ||| || || | ||||||||||||| |||||||| || | Sbjct 5226822 CCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAGCC 5226881 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||||||| |||||||||| | |||| || | |||||||||||||| Sbjct 5226882 AAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAGGG 5226941 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| || || | | ||| |||||||||| || ||| Sbjct 5226942 ATTCCTTCTTTGTCTTGGATCTTGGCATTGACGTTTTCGACGGTGTCGGAGCTTTCGACC 5227001 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGC 138617 || | || | || || || || |||||||| || || || ||||| || Sbjct 5227002 TCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCATCGC 5227051 Score = 102 bits (112), Expect = 8e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| |||||||| || ||||| || | |||||| ||||| || |||||||||| Sbjct 5226625 TTGATTCCTTTTGGATATTGTAATCCGCAAGAGTACGACCATCCTCTAGCTGTTTACCGG 5226684 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | |||||||||||||| || |||||||| || ||| || ||| | Sbjct 5226685 CAAAGATAAGTCTCTGTTGGTCCGGAGAGATTCCTTCTTTATCTTGGATCTTGGCTTTGA 5226744 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | |||||| | || ||||||| || | ||||| ||||| || |||| Sbjct 5226745 CGTTGTCAATGGTGTCTGAGCTTTCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGGTTT 5226804 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| || ||||| Sbjct 5226805 TCACAAAGATTTGCAT 5226820 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | || ||||| | | |||| ||||| |||||||| || || Sbjct 14806201 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATCCGCA 14806142 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| |||||||| || | | |||| || | ||||| ||||||||| Sbjct 14806141 AGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGAGGG 14806082 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | ||||| |||| | | ||||| | ||| | Sbjct 14806081 ATTCCTTCCTTGTCT-TGAATCTTAGCTTTAACATTGT-CAATGGTGTATGAGCTCTCGA 14806024 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||||||||| || || || ||||| |||||||| Sbjct 14806023 CTTCTAGGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCAT 14805975 Score = 82.4 bits (90), Expect = 8e-11 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCG 138477 ||||||| || |||||||||||||| ||| || || || || ||||||||||| || Sbjct 14806383 TTGACTCTTTCTGAATGTTGTAGTCCGCTAAT-GTCCGACCATCTTCGAGTTGTTTTCCC 14806325 Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 | | ||||||| | ||| ||||||||||| || ||||| || || Sbjct 14806324 GCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATC 14806281 >seq6 Length=37079636 Score = 111 bits (122), Expect = 2e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | | || || || | | |||| ||||| || |||||||| || Sbjct 33565082 CCTCCTCTCAACCTGAGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATCCGCA 33565023 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||| || ||||||| | |||| || | ||| ||||||||||| Sbjct 33565022 AGAGTTCGACCATCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGG 33564963 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| |||| | ||||| |||| | | |||||| | ||| | Sbjct 33564962 ATTCCTTCCTTGTCT-TGAATTTTAGCTTTAACATTGT-CAATGGTGTCTGAGCTCTCGA 33564905 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | |||||||||||| || || || ||||| |||| ||| Sbjct 33564904 CTTCTAGGGTAATCGTTTTACCAGTAAGTGTCTTGACAAATATCTACAT 33564856 Score = 105 bits (116), Expect = 7e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | || ||||| | | |||| ||||| |||||||| || || Sbjct 33565310 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATCCGCA 33565251 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| |||||||| || | | |||| || | ||||||||||||||| Sbjct 33565250 AGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGG 33565191 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | || | ||| || | |||||| | ||| | Sbjct 33565190 ATCCCTTCCTTGTC-TTGAATCTTCGCCTTGACGTTG-TCAATGGTGTCTGAGCTCTCAA 33565133 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||||||||| || ||||| ||||| |||||||| Sbjct 33565132 CTTCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | | |||||||| ||||||||||||||| Sbjct 19969761 CCACCACGAAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCT 19969820 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || || | | | || |||||||| ||||||||||| Sbjct 19969821 AAGGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGG 19969880 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| || || | | || | ||||| | ||| ||| Sbjct 19969881 ATCCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTCGACC 19969940 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || |||||||||| || || || || |||||||| Sbjct 19969941 TCGAGGGTAATGGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 19969987 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || ||| || ||||| || |||||||| | Sbjct 19969566 GACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGTTTACCAGCG 19969625 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 ||||||||||||| |||||||| || |||||||| ||||| ||| || || | | Sbjct 19969626 AAGATTAGACGCTGCTGGTCCGGTGGGATACCTTCCTTGTCCTGGATCTTAGCCTTGACA 19969685 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||| || || | || | || || ||||| ||||| || Sbjct 19969686 TTG-TCAATTGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTCTTTCCAGTAAGAGTCTT 19969744 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 19969745 CACGAAAATCTGCAT 19969759 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/199 (72%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCG 138477 ||||||| || |||||||||||||| ||| || || || || ||||||||||| || Sbjct 33565507 TTGACTCTTTCTGAATGTTGTAGTCCGCTAAT-GTCCGACCATCTTCGAGTTGTTTTCCC 33565449 Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT 138537 | | ||||||| | ||| ||||||||||| || ||||| || || ||| | || | ||| Sbjct 33565448 GCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATC-TTGAATCTTCGCTTT 33565390 Query 138538 --AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAG 138595 |||| || | || || | || ||||| | || | ||| || || |||| || Sbjct 33565389 CACATTG-TCAATTGTATCCGAGCTTTCGACCTCAAGAGTTATCGTCTTTCCCGTCAAAG 33565331 Query 138596 TTTTTACAAAAATCTGCAT 138614 | || ||||| |||||||| Sbjct 33565330 TCTTGACAAATATCTGCAT 33565312 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | ||||||||||| || |||||||| | Sbjct 13447913 CCACCCCGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCC 13447854 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || || || |||| | |||| | | ||| |||||||| || Sbjct 13447853 AAGGTACGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGA 13447794 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| ||| || | | || | ||||| | ||||||| Sbjct 13447793 ATACCTTCCTTATCTTGGATCTTTGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCCACC 13447734 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || |||||||||| || || || || || ||||| Sbjct 13447733 TCGAGAGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || | |||| | |||||||| ||||| |||||||| | Sbjct 13448141 CCACCACGGAGACGCAACACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAGCC 13448082 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| || || || || | | |||| |||||||| |||||||| || Sbjct 13448081 AAAGTCCGACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGGG 13448022 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | ||||| | | ||||| | |||||| Sbjct 13448021 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGT-CAATTGTGTCTGAGCTCTCCAC 13447963 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || |||| || || || ||||||||||| Sbjct 13447962 CTCAAGAGTGATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || ||||| | | ||||| || || || ||||||||| | Sbjct 19969989 CCACCACGTAGACGCAACACCAAATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGCC 19970048 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | |||||||||||| || |||| | || | | || ||||||||||| Sbjct 19970049 AGAGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAAATCAATCTTTGCTGGTCCGGAGGA 19970108 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| |||||||| |||||| || | | || | |||||||| || || Sbjct 19970109 ATACCCTCTTTGTCCTGGATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAACT 19970168 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| |||| || || ||||| |||||||| Sbjct 19970169 TCCAAGGTGATGGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 19970215 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | |||||| |||||| ||||| || |||| | Sbjct 19970250 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCCTCAAGTTGCTTTCCGGCA 19970309 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | ||| || |||||||| || || || ||||| ||| || || | Sbjct 19970310 AAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACG 19970369 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||||| || | || |||||||||| || || Sbjct 19970370 TTATCAATGGTGTCAGAACTCTCAACCTCGAGGGTAATAGTCTTACCAGTCAAGGTCTTA 19970429 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 19970430 ACGAAGATCTGCAT 19970443 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || || ||||| || | |||||| |||||| || || || || | Sbjct 13447360 GACTCCTTCTGGATATTGTAATCCGCAAGAGTACGACCGTCCTCAAGCTGCTTTCCAGCG 13447301 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | ||| || |||||||| |||||||| || || ||| | || | ||| | Sbjct 13447300 AAGATCAACCTCTGCTGATCCGGAGGAATACCTTCCTTATCT-TGAATCTTAGCTTTCAC 13447242 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | ||| ||||||| || | ||||||||||||| || || Sbjct 13447241 GTTATCGATGGTGTCAGAACTCTCAACCTCGAGAGTAATAGTTTTACCAGTCAAGGTCTT 13447182 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 13447181 CACAAAGATCTGCAT 13447167 Score = 82.4 bits (90), Expect = 8e-11 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCG 138477 ||||||| || |||||||||||||| ||| || || || || ||||||||||| || Sbjct 33830076 TTGACTCTTTCTGAATGTTGTAGTCCGCTAAT-GTCCGACCATCTTCGAGTTGTTTTCCC 33830134 Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 | | ||||||| | ||| ||||||||||| || ||||| || || Sbjct 33830135 GCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATC 33830178 >seq4 Length=23266485 Score = 109 bits (120), Expect = 5e-19 Identities = 146/198 (74%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGT-CGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCG 138477 ||||||| || ||||||||||||| |||| | ||| || ||||| |||||||| ||| Sbjct 5738658 TTGACTCTTTCTGAATGTTGTAGTCCGCT-AAAGTCCGACCATCCTCTAGTTGTTTTCCG 5738600 Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT 138537 | | ||||||| | |||||||||| |||| || ||||| ||||| ||| | || | || Sbjct 5738599 GTAAAGATTAGCCTCTGTTGGTCCAGAGGGATTCCTTCCTTGTC-TTGAATCTTCGCCTT 5738541 Query 138538 AAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 || | || | ||||| | ||| || || | || | ||||||||||| || || Sbjct 5738540 GATGTTGTCAATAGTGTCTGAGCTCTCAACTTCTAGGGTAATAGTTTTACCAGTAAGCGT 5738481 Query 138597 TTTTACAAAAATCTGCAT 138614 || ||||| |||||||| Sbjct 5738480 CTTGACAAATATCTGCAT 5738463 Score = 105 bits (116), Expect = 7e-18 Identities = 143/197 (73%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| || ||||||||||| || |||||| ||| ||||||||||| |||| Sbjct 22703233 TTGATTCCTTCTGGATGTTGTAGTCAGCCAGAGTACGTCCGTCTTCGAGTTGTTTTCCGG 22703292 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||||| || ||||| ||||| || || ||||| ||||| ||| || || | Sbjct 22703293 CGAAGATTAATCGTTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA 22703352 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | || |||| || || ||||||| || | ||| || || || || ||| Sbjct 22703353 CATTG-TCGATTGTATCGGATGATTCAACCTCGAGAGTGATCGTCTTCCCTGTTAGGGTT 22703411 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 22703412 TTCACGAAGATCTGCAT 22703428 Score = 100 bits (110), Expect = 3e-16 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 ||||||||||||| ||||||||||| | |||||| |||||||| |||||||| | Sbjct 5744938 TTGACTCCTTTTGGATGTTGTAGTCCGCAAGAGTACGGCCATCCTCGAGCTGTTTACCCG 5744879 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | || || |||||||| || ||||| ||||| ||| | || | |||| Sbjct 5744878 CAAAGATAAGTCTCTTCTGTTCCGGAGGGATCCCTTCCTTGTC-TTGAATCTTAGCTTTA 5744820 Query 138539 --ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 |||| || | |||||| | ||| || || | || | |||||| || || || Sbjct 5744819 ACATTG-TCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATGGTTTTATTGGTAAGCGT 5744761 Query 138597 TTTTACAAAAATCTGCAT 138614 || ||||| |||||||| Sbjct 5744760 CTTGACAAATATCTGCAT 5744743 >seq5 Length=22804910 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| || || || ||||||||||| | |||||| ||| ||||||||||| || | Sbjct 22133773 TTGATTCTTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCGTCTTCGAGTTGTTTTCCAG 22133714 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||||| ||| || |||||||| || || ||||| ||||| ||| || ||| | Sbjct 22133713 CGAAGATTAAACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCTTTGA 22133654 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | ||| || | || || ||||||| || | || || || || || ||| Sbjct 22133653 CATTG-TCGATGGTATCTGATGATTCAACCTCGAGAGTGATTGTCTTCCCCGTTAGGGTT 22133595 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 22133594 TTCACGAAGATCTGCAT 22133578 >seq7 Length=29178675 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || ||||| | || | |||| |||||||||| || |||||||| || Sbjct 2570840 CCACCGCGTAAACGAAGGACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCA 2570781 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||||||||||||||| | |||| || | ||||| ||||||||| Sbjct 2570780 AGAGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCCGGAGGG 2570721 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || || | | || | | |||| | ||| || Sbjct 2570720 ATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACT 2570661 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| || ||||| ||||| || ||||| Sbjct 2570660 TCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCAT 2570614 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| |||||| | || ||||| | |||| ||||| ||||| ||||| || | Sbjct 2571068 CCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCCCCA 2571009 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| |||||||| | | |||| || | ||||| ||| ||||| Sbjct 2571008 AGGGTTCGACCATCCTCGAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCTGGAGGG 2570949 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || || | | || | | |||| | ||| || Sbjct 2570948 ATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACT 2570889 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| || ||||| ||||| || ||||| Sbjct 2570888 TCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCAT 2570842 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || ||||| | ||| | |||| |||||||||| || |||||||| || Sbjct 2570612 CCACCGCGTAAACGAAGAACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCA 2570553 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||||||||||||||| | |||| || | ||||| ||||||||| Sbjct 2570552 AGTGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGTTCGTCCGGAGGG 2570493 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || || | | || | ||| || | || ||| Sbjct 2570492 ATCCCTTCCTTATCTTGGATCTTCGCCTTGACATCGTCAATGGTTTCTGAGCTTTCGACC 2570433 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || || ||||| || ||||| || ||||| Sbjct 2570432 TCGAGGGTTATGGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 2570386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496090128711120