Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 143 3e-29 seq7 114 1e-20 seq3 102 8e-17 seq4 95.1 1e-14 >seq6 Length=37079636 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| |||||||||||||| | ||||||||||| || |||||||| ||| || Sbjct 19969989 CCACCACGTAGACGCAACACCAAATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGCC 19970048 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || || || ||||| ||| | ||||||| ||||| || ||||| Sbjct 19970049 AGAGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAAATCAATCTTTGCTGGTCCGGAGGA 19970108 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| |||||| |||||| ||||| |||| || | |||||| | || || || Sbjct 19970109 ATACCCTCTTTGTCCTGGATTTTGGCCTTGACGTTG-TCAATGGTGTCGGAGCTTTCAAC 19970167 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | || || ||||||| || || ||||| |||||||| Sbjct 19970168 TTCCAAGGTGATGGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 19970215 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || ||||| || || ||||||||||| ||| || || ||| || Sbjct 19970463 ACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAATCCGCCAAGGTACGGCCATCTTCC 19970522 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| ||||||||| ||||||||| ||||||||| ||||| || |||||||| || | Sbjct 19970523 AACTGCTTTCCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATTCCCTCCTTATCTTGG 19970582 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | |||| |||| ||||| | ||| || || |||| ||| | || || Sbjct 19970583 ATCTTAGCCTTAACGTTG-TCGATCGTGTCAGAACTTTCCACCTCGAGGGTGATAGTCTT 19970641 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| |||||||| ||||| |||||||| Sbjct 19970642 TCCGGTGAGAGTTTTCACAAAGATCTGCAT 19970671 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| || || || ||||| || || Sbjct 19969533 CCACCACGGAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 19969592 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || |||||||| |||||| |||| | |||||||| || || || Sbjct 19969593 AAAGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGG 19969652 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||||| | || | ||||| | ||||||||| Sbjct 19969653 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATTGTGTCAGAGCTCTCGACT 19969712 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || || ||||| || || ||||||||||| Sbjct 19969713 TCAAGGGTGATGGTCTTTCCAGTAAGAGTCTTCACGAAAATCTGCAT 19969759 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || || || || || ||||||||||| || Sbjct 13447165 CCACCACGAAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATATTGTAATCCGCC 13447106 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || | || || |||||| ||||||||| ||||||||| ||||| Sbjct 13447105 AAGGTACGCCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGATCCGGAGGA 13447046 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||| ||| ||| | | |||| | ||| |||| || || | ||| || | Sbjct 13447045 ATCCCTTCCTTATCC-TGAATCTTCGCTTTAACATTG-TCGATCGTATCAGAACTTTCCA 13446988 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| || | || || ||||| |||||||| ||||| |||||||| Sbjct 13446987 CCTCGAGAGTGATTGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 13446939 Score = 122 bits (134), Expect = 8e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||||||| | || || || || ||||| || ||||| | | ||| ||| ||| || Sbjct 33565293 CACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATCCGCAAGCGTTCGACCATCCTC 33565234 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || ||||||||||| |||| | || ||| || || ||||| || || |||||||| Sbjct 33565233 AAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCTTG 33565174 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 || ||| ||||| |||| || | |||||| | ||||| ||||| | ||| | |||| Sbjct 33565173 AATCTTCGCCTTGACGTTG-TCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATAGTTT 33565115 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || || ||||| ||||| |||||||| Sbjct 33565114 TACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||| | |||||||| || || ||||||||||| | | || ||| || || Sbjct 13447376 CACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGTACGACCGTCCTC 13447317 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| ||||||||| ||||||| | ||||||||| ||||| || || ||||| | | | Sbjct 13447316 AAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCTTCCTTAT-CTT 13447258 Query 127024 GATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 || | | || || | | |||| |||||| | |||||| || |||| || | |||| Sbjct 13447257 GAATCTTAGCTTTCACGTTATCGATGGTGTCAGAACTCTCAACCTCGAGAGTAATAGTTT 13447198 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || |||| || || ||||| |||||||| Sbjct 13447197 TACCAGTCAAGGTCTTCACAAAGATCTGCAT 13447167 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||||| |||| || ||||| || ||||||||||| || || Sbjct 13448141 CCACCACGGAGACGCAACACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAGCC 13448082 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| ||||| || |||| | |||||||| || || || Sbjct 13448081 AAAGTCCGACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGGG 13448022 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | || | ||||| | ||||| || Sbjct 13448021 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCCACC 13447962 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||||| || || || ||||||||||| Sbjct 13447961 TCAAGAGTGATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || |||||||| ||||| |||||||| || Sbjct 13448369 CCACCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCTTTCTGAATGTTGTAATCCGCC 13448310 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || |||||| |||| | |||||||| || || || Sbjct 13448309 AGTGTACGACCATCCTCAAGCTGCTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGA 13448250 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| ||| ||| || ||| | | || | || || | ||||| ||| Sbjct 13448249 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTATCAATAGTATCAGAGCTCTCAACT 13448190 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || |||||||| ||||| || || ||||||||||| Sbjct 13448189 TCAAGTGTGATTGTCTTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 13448143 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| |||||||||||||| | ||| |||||| || || |||||||| || Sbjct 13447621 CCACCACGTAGACGCAACACCAAATGAAGAGTACTCTCTTTCTGGATGTTGTAATCAGCC 13447562 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || ||||| || || ||| ||||||||| |||||| || ||||| Sbjct 13447561 AAAGTTCTGCCGTCTTCAAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 13447502 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| ||||| ||| || ||| | | || | || || | || || ||| Sbjct 13447501 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTATCAATAGTATCGGAGCTTTCAACT 13447442 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| |||| || || ||||| |||||||| Sbjct 13447441 TCCAAAGTAATGGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 13447395 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | |||||||| ||||| |||||||| || || Sbjct 13447913 CCACCCCGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCC 13447854 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| ||||| || ||||||| | |||||| || || || Sbjct 13447853 AAGGTACGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGA 13447794 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||| || ||| | |||| || | ||||| | ||||| || Sbjct 13447793 ATACCTTCCTTATCTTGGATCTTTGCCTTCACGTTG-TCAATAGTGTCAGAGCTCTCCAC 13447735 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || || |||| || || || || || ||||| Sbjct 13447734 CTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 100 bits (110), Expect = 3e-16 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || || || || || |||||||| | | || ||| ||| || Sbjct 33565064 ACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATCCGCAAGAGTTCGACCATCCTCG 33565005 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || || |||||| | |||||| || ||||| || || |||||||| || Sbjct 33565004 AGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCT-TG 33564946 Query 127025 ATTTTCTGCTTGAG--TTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 | ||| |||| | |||| | | |||||| | ||||||||||| | ||| | ||||| Sbjct 33564945 AATTTTAGCTTTAACATTGT-CAATGGTGTCTGAGCTCTCGACTTCTAGGGTAATCGTTT 33564887 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || || || || ||||| |||| ||| Sbjct 33564886 TACCAGTAAGTGTCTTGACAAATATCTACAT 33564856 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || | | || ||| || || || || ||||| Sbjct 19970247 GTAGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCCTCAAGTTGCTTTCCG 19970306 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| | ||||||||| ||||| || ||||||||||| ||| || ||| Sbjct 19970307 GCAAAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTA 19970366 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | |||||| || |||| ||| | || || || |||| || Sbjct 19970367 ACGTTATCAATGGTGTCAGAACTCTCAACCTCGAGGGTAATAGTCTTACCAGTCAAGGTC 19970426 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 19970427 TTAACGAAGATCTGCAT 19970443 >seq7 Length=29178675 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | || || | ||||||||| | || || || || |||||||||||||| || Sbjct 2571069 TCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCCCC 2571010 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| ||| || |||||||| ||||| |||| | | ||| | || ||||| Sbjct 2571009 AAGGGTTCGACCATCCTCGAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCTGGAGG 2570950 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||| ||| ||||| | || | | |||| | ||||| || Sbjct 2570949 GATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAAC 2570890 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | ||||| || || || ||||| ||||| || ||||| Sbjct 2570889 TTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCAT 2570842 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||||||||| || | || | |||| || ||||| || || || |||||||| | Sbjct 2570613 TCCACCGCGTAAACGAAGAACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGC 2570554 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| ||| || || ||||| |||||| |||| | | ||| | || ||||| Sbjct 2570553 AAGTGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGTTCGTCCGGAGG 2570494 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||| ||| ||||| | || | ||| || | || ||||| Sbjct 2570493 GATCCCTTCCTTATCTTGGATCTTCGCCTTGACATCGTCAATGGTTTCTGAGCTTTCGAC 2570434 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || ||||| || ||||| || ||||| || ||||| Sbjct 2570433 CTCGAGGGTTATGGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 2570386 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||||||||| || | || | |||| || ||||| || || || |||||||| | Sbjct 2570841 TCCACCGCGTAAACGAAGGACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGC 2570782 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| ||| || || ||||| |||||| |||| | | ||| | || ||||| Sbjct 2570781 AAGAGTACGACCATCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCCGGAGG 2570722 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||| ||| ||||| | || | | |||| | ||||| || Sbjct 2570721 GATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAAC 2570662 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | ||||| || || || ||||| ||||| || ||||| Sbjct 2570661 TTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCAT 2570614 >seq3 Length=27950219 Score = 102 bits (112), Expect = 8e-17 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||||||| | || || || || ||||| || ||||| | | ||| ||| ||| || Sbjct 14806184 CACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATCCGCAAGCGTTCGACCATCCTC 14806125 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || ||||||||||| |||| | || ||| | || ||||| || || ||||||| | | Sbjct 14806124 AAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGAGGGATTCCTTCCTTGT-CTT 14806066 Query 127024 GATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 || | | |||| | ||| || | ||||| | ||||||||||| | ||| | ||| Sbjct 14806065 GAATCTTAGCTTTAACATTG-TCAATGGTGTATGAGCTCTCGACTTCTAGGGTAATGGTT 14806007 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || ||||| |||||||| Sbjct 14806006 TTACCAGTAAGTGTCTTGACAAATATCTGCAT 14805975 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| ||||| ||||||||||| | | |||||| ||| || |||||||| ||| Sbjct 5226328 GTAGACTCCTTTTGGATATTGTAATCCGCAAGAGTGCGACCATCCTCGAGCTGTTTACCA 5226387 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | || ||| || || |||| || || |||||||| || || |||| Sbjct 5226388 GCGAATATAAGTCTCTGTTGGTCCGGAGTGATCCCTTCCTTGTCTTGAATCTTGGCCTTG 5226447 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGT 127074 | |||| |||| |||||| | ||||| ||||| | ||| Sbjct 5226448 ACGTTG-TCGATGGTGTCTGAGCTCTCAACTTCTAAGGT 5226485 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || ||||| ||||||||||| | | || ||| ||| ||||||||||| || Sbjct 5226624 GTTGATTCCTTTTGGATATTGTAATCCGCAAGAGTACGACCATCCTCTAGCTGTTTACCG 5226683 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | || ||| || || |||| || || || || || ||| || ||| Sbjct 5226684 GCAAAGATAAGTCTCTGTTGGTCCGGAGAGATTCCTTCTTTATCTTGGATCTTGGCTTTG 5226743 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | |||||| | || ||||| |||| || | |||||||| || || || Sbjct 5226744 ACGTTG-TCAATGGTGTCTGAGCTTTCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGGT 5226802 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| ||||| || ||||| Sbjct 5226803 TTTCACAAAGATTTGCAT 5226820 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || |||| ||||| || | || ||||| ||||| || |||||||| ||| || || Sbjct 5226831 AAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAGCCAAGGTACGG 5226890 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 || || |||||||| || || |||| | | || || || ||||| || || || Sbjct 5226891 CCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAGGGATTCCTTCT 5226950 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 ||||| ||| || |||| | |||||||||||| | || ||||| || | || Sbjct 5226951 TTGTCTTGGATCTTGGCATTGACGTTTTCGACGGTGTCGGAGCTTTCGACCTCAAGTGTT 5227010 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 | || ||||| || |||||||| || || || ||||| || Sbjct 5227011 ATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCATCGC 5227051 Score = 82.4 bits (90), Expect = 7e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 |||| || ||||||||||| | | || ||| ||| || ||||||||||||||| ||| Sbjct 6350424 CTTTCTGGATATTGTAATCAGCTAAGGTACGACCATCTTCAAGCTGTTTTCCAGCGAAGA 6350483 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCC 127011 |||||| ||||||||| ||||| || || Sbjct 6350484 TCAATCTCTGCTGATCCGGAGGAATACC 6350511 >seq4 Length=23266485 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||||||||| || | || | || | || ||||| ||||| || ||||| || | Sbjct 5744970 TCCACCGCGTAAACGAAGGACAAGGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCCGC 5744911 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || || ||| || |||||||| || || |||| | || || ||| || ||||| Sbjct 5744910 AAGAGTACGGCCATCCTCGAGCTGTTTACCCGCAAAGATAAGTCTCTTCTGTTCCGGAGG 5744851 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCG 127063 || || ||||||| | ||| | | |||| | ||| || | |||||| | ||||| Sbjct 5744850 GATCCCTTCCTTGT-CTTGAATCTTAGCTTTAACATTG-TCAATGGTGTCTGAGCTCTCA 5744793 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | ||| | ||||| ||| || || || ||||| |||||||| Sbjct 5744792 ACTTCTAGGGTAATGGTTTTATTGGTAAGCGTCTTGACAAATATCTGCAT 5744743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475335735841040