Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 147 2e-30 seq7 127 2e-24 seq8 104 2e-17 seq6 102 8e-17 seq5 93.3 4e-14 seq4 93.3 4e-14 >seq3 Length=27950219 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || |||||||| ||||| || | || ||||| | || Sbjct 5227048 ATGCAAATCTTCGTGAAAACTCTTACGGGCAAGACCATAACACTTGAGGTCGAAAGCTCC 5226989 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| ||| | ||||| | || | || |||| |||||||| ||||| || | ||||| Sbjct 5226988 GACACCGTCGAAAACG-TCAATGCCAAGATCCAAGACAAAGAAGGAATCCCTCCGGACCA 5226930 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || || |||||||| || |||| || ||| | || ||||| Sbjct 5226929 ACAAAGGCTTATCTTTGCCGGTAAACAGCTCGAGGACGGCCGTACCTTGGCTGATTACAA 5226870 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || || || ||||| |||||||||||||| || Sbjct 5226869 CATCCAAAAGGAGTCAACTCTCCACTTGGTTCTGCGTTTGAGAGGAGG 5226822 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || || || || |||||||| ||| | || |||||| | | Sbjct 14805975 ATGCAGATATTTGTCAAGACACTTACTGGTAAAACCATTACCCTAGAAGTCGAGAGCTCA 14806034 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | | | |||||| || || | ||||| || ||||| || | ||| || Sbjct 14806035 TACACCATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATCCCTCCGGACTAA 14806094 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | ||||| | || || ||||| || || || | || || || || || ||| Sbjct 14806095 CAGAGACTCATCTTTGCTGGAAAACAACTTGAGGATGGTCGAACGCTTGCGGATTATAAC 14806154 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || |||||| | || |||||||||||||| ||| ||||||| || Sbjct 14806155 ATTCATAAGGAATCAACCCTGCATTTGGTGCTACGTCTGAGAGGTGG 14806201 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || ||||||||||| || |||| ||||| | | Sbjct 5226820 ATGCAAATCTTTGTGAAAACCCTAACTGGCAAAACCATAACACTCGAGGTCGAAAGCTCA 5226761 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| || |||| || ||||| ||||| | | ||||| Sbjct 5226760 GACACCATTGACAACG-TCAAAGCCAAGATCCAAGATAAAGAAGGAATCTCTCCGGACCA 5226702 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | || || | || || |||||||| || || | || || || || ||||| Sbjct 5226701 ACAGAGACTTATCTTTGCCGGTAAACAGCTAGAGGATGGTCGTACTCTTGCGGATTACAA 5226642 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || || || | || || ||| Sbjct 5226641 TATCCAAAAGGAATCAACACTTCACCTTGTTCTTCGT 5226605 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 38242 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCA 38301 |||||||||||||||| ||||| |||| ||||| ||||| | |||| |||||| | Sbjct 16876667 AAATGCAAATATTCGTGAAAACACTCATTGGCAAGACCATAATTCTCGAGGTCGAGAGCT 16876726 Query 38302 CCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | ||| |||| ||||| ||||||||||| | |||| Sbjct 16876727 ATGACATGATCGACATTGTTAAGGCAAAGATCCAAGACAAGGAGGGAATTCCTCCGGACC 16876786 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 || | | || || | ||| | ||| |||| || || | || || | |||||||| Sbjct 16876787 AAGAAAGACTAATCTTCGCCGATAAAAAGCTAGAAGATGGCCGTACTTTGGCCGACTACA 16876846 Query 38422 ACATCCAAAAGGAA 38435 | ||||| |||||| Sbjct 16876847 AAATCCAGAAGGAA 16876860 >seq7 Length=29178675 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||||||||| || ||||| ||||| || ||||| || ||| | || || ||| | | Sbjct 2570841 AATGCAAATATTTGTGAAAACACTCACTGGTAAAACTATTACCTTAGAAGTTGAGAGCTC 2570900 Query 38303 CGACAGCGTGCAA-ACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||||| | | ||| | || | || |||| || || || || || || | ||| Sbjct 2570901 AGACAGCATTGACGACG-TCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCAGACG 2570959 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| ||||||| | || || |||||||| || || | || ||||| || |||| Sbjct 2570960 AACAGAGGCTCATCTTTGCTGGTAAACAGCTCGAGGATGGTCGAACCCTTGGGGATTACA 2571019 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || || |||||| | || |||||||||||||| ||||||||||| || Sbjct 2571020 ATATTCAGAAGGAATCAACTCTGCATTTGGTGCTACGTTTGAGAGGTGG 2571068 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||||||||| || ||||| ||||| || ||||| || ||| | || || ||| | | Sbjct 2570613 AATGCAAATATTTGTGAAAACACTCACTGGTAAAACTATTACCTTAGAAGTTGAGAGCTC 2570672 Query 38303 CGACAGCGTGCAA-ACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||||| | | ||| | || | || |||| || || || || || || | ||| Sbjct 2570673 AGACAGCATTGACGACG-TCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCGGACG 2570731 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| ||||||| | ||| || ||||| || || || | || || || || |||| Sbjct 2570732 AACAGAGGCTCATCTTCGCTGGTAAACAACTCGAGGATGGTCGTACTCTTGCGGATTACA 2570791 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461 ||||||| ||||| | || || || | || || ||||| Sbjct 2570792 ACATCCAGAAGGAGTCAACTCTACACCTTGTCCTTCGTTT 2570831 >seq8 Length=40886855 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| ||||| || || || || ||||| || |||| |||||| | | Sbjct 1190283 ATGCAAATATTCGTGAAAACTCTTACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 1190224 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | |||| | ||| |||| ||||| || || ||||| | || || Sbjct 1190223 GACACTATCGATAATGTTAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAG 1190164 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | || || | ||| || || || || || || | | || || ||||||||| Sbjct 1190163 CAAAGACTTATCTTCGCTGGTAAGCAACTTGAAGATGGAAGGACTCTTGCCGACTACAAT 1190104 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| |||| |||| ||||| || || |||||||| || Sbjct 1190103 ATCCAGAAGGAGTCGACCTTGCACTTGGTTCTCCGATTGAGAGGTGG 1190057 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| || || ||||| || |||||||| ||| | || || ||| | | Sbjct 1188846 ATGCAGATATTCGTGAAGACCCTCACTGGTAAAACCATTACCCTTGAGGTGGAGAGCTCA 1188787 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || || | ||||| || || ||||| | || || Sbjct 1188786 GACACAATAGACAATGTGAAGGCTAAGATTCAGGACAAGGAAGGGATTCCTCCGGATCAG 1188727 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | ||| || || || || || || | | || || || |||||| Sbjct 1188726 CAGAGACTTATCTTCGCCGGTAAGCAACTTGAAGATGGAAGGACTCTTGCGGATTACAAC 1188667 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| |||| || |||||||| || ||| Sbjct 1188666 ATCCAGAAGGAATCGACTCTTCATTTGGTTCTTCGT 1188631 >seq6 Length=37079636 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| || ||||| || ||| | || || ||| | | Sbjct 33565084 ATGCAGATCTTTGTGAAAACCCTCACTGGTAAAACTATTACCCTAGAAGTTGAGAGCTCA 33565143 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || || | ||||| || || || || | ||||| Sbjct 33565144 GACACCATTGACAACG-TCAAGGCGAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCA 33565202 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | ||||| | || || ||||| || || || | || || || || || || Sbjct 33565203 ACAGAGACTCATCTTTGCTGGAAAACAACTTGAGGATGGTCGAACGCTTGCGGATTATAA 33565262 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || |||||| | || |||||||||||||| ||| ||||||| || Sbjct 33565263 CATTCAGAAGGAATCAACCCTGCATTTGGTGCTACGTCTGAGAGGTGG 33565310 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || ||||| ||| |||| |||||| | | Sbjct 19969987 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTCGAGAGCTCA 19969928 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| |||||||| || || || | ||||| Sbjct 19969927 GACACTATTGACAACG-TCAAGGCCAAGATCCAGGACAAAGAAGGGATCCCTCCGGACCA 19969869 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| || || || ||||| || || | || ||| | ||||||||| Sbjct 19969868 GCAGCGTCTCATTTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACCTTAGCCGACTACAA 19969809 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| |||| || || ||||| ||||| Sbjct 19969808 CATTCAGAAGGAGTCGACCCTTCACTTGGTCTTGCGT 19969772 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||| | ||||| || || || || || || ||||| || ||| | || |||||| | | Sbjct 33564856 ATGTAGATATTTGTCAAGACACTTACTGGTAAAACGATTACCCTAGAAGTCGAGAGCTCA 33564915 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||||| ||||| | ||||| || ||||| || | ||||| Sbjct 33564916 GACACCATTGACAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCGGACCAG 33564975 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || || ||||| || || | || || || || |||||| Sbjct 33564976 CAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGAACTCTTGCGGATTACAAC 33565035 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| | || || || ||||| || | |||||||| || Sbjct 33565036 ATCCAGAAGGAATCAACCCTCCACTTGGTCCTCAGGTTGAGAGGAGG 33565082 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || ||||||||| | || |||||| | | Sbjct 19969759 ATGCAGATTTTCGTGAAGACTCTTACTGGAAAGACCATCACCCTTGAAGTCGAGAGCTCT 19969700 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| || || || || | ||||| Sbjct 19969699 GACACAATTGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGTATCCCACCGGACCAG 19969640 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || |||||||| || || | ||||| | ||||||||| Sbjct 19969639 CAGCGTCTAATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACTTTGGCTGACTACAAC 19969580 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || || ||||| || ||| Sbjct 19969579 ATCCAGAAGGAGTCTACTCTCCACTTGGTCCTCCGT 19969544 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || || ||||||||| | || || || | || Sbjct 19970215 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACCATCACCTTGGAAGTTGAAAGCTCC 19970156 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||||| ||||||||||| ||||| | ||||| Sbjct 19970155 GACACCATTGACAACG-TCAAGGCCAAAATCCAGGACAAAGAGGGTATTCCTCCGGACCA 19970097 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || | | |||| ||| || || || || || |||| | || || ||||||||| Sbjct 19970096 GCAAAGATTGATTTTCGCCGGAAAGCAACTCGAGGACGGCAGAACTCTGGCCGACTACAA 19970037 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || | || || ||||||||| ||||| Sbjct 19970036 TATCCAGAAAGAGTCTACTCTCCATTTGGTGTTGCGT 19970000 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || ||||| || |||| || ||| | | Sbjct 13447687 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACTCTCGAGGTGGAGAGCTCT 13447746 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||| |||| || || || || ||||| | ||||| Sbjct 13447747 GACACTATTGACAACG-TGAAGGCAAAGATCCAAGATAAGGAAGGTATTCCACCGGACCA 13447805 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || || ||||| || || | || ||| | |||||||| Sbjct 13447806 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCTGACTACAA 13447865 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||| | || |||| |||||| ||||| Sbjct 13447866 TATCCAAAAGGAGTCTACATTGCACTTGGTGTTGCGT 13447902 >seq5 Length=22804910 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || ||||| || || ||||| |||| || || | | Sbjct 22133578 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACTCTCGAGGTTGAATCATCA 22133637 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | |||| || |||| ||||| || ||||| || | ||||| Sbjct 22133638 GATACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAG 22133697 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | ||| || ||||| || || |||| || || ||| ||||||||| Sbjct 22133698 CAACGTTTAATCTTCGCTGGAAAACAACTCGAAGACGGACGTACTCTCGCTGACTACAAC 22133757 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || ||| | ||||| ||| | || || ||| Sbjct 22133758 ATCCAGAAAGAATCAACGCTTCATCTTGTCCTTCGT 22133793 >seq4 Length=23266485 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| ||||| || |||| ||| ||| | || || ||| | Sbjct 5744347 ATGCAAATCTTTGTGAAAACACTCACTGGTAAAATCATTACCCTAGAAGTTGAGAGTTCA 5744406 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | || || | || ||||| ||||| || | ||||| Sbjct 5744407 GATACAATTGACAACG-TCAAGGCGAAGATTCAAGATAAAGAAGGAATCCCTCCTGACCA 5744465 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||||| |||||||| || || | | || || |||||||| Sbjct 5744466 ACAAAGGCTAATCTTTGCGGGTAAACAGCTCGAAGATGGTTGTACTCTTGCGGACTACAA 5744525 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| |||||| | || || || ||||| || | |||||||| || Sbjct 5744526 CATCCAGAAGGAATCAACCCTCCACTTGGTTCTCAGGTTGAGAGGTGG 5744573 Score = 86.0 bits (94), Expect = 6e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| || || || || || ||||| |||| || || | Sbjct 22703432 AAAGATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATCACTCTCGAGGTTGAATC 22703373 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||| | | | | | || | || |||| ||||| || ||||| || | || Sbjct 22703372 ATCCGATACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGA 22703313 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||| || | || | ||| || ||||| || || |||| || || || ||||| Sbjct 22703312 TCAACAACGATTAATCTTCGCCGGAAAACAACTCGAAGACGGACGTACTCTGGCTGACTA 22703253 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| |||||| | ||||| ||| | || || ||| Sbjct 22703252 CAACATCCAGAAGGAATCAACGCTTCATCTCGTCCTTCGT 22703213 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || ||||| || |||||||| ||| | || || ||| | | Sbjct 5744743 ATGCAGATATTTGTCAAGACGCTTACCAATAAAACCATTACCCTAGAAGTTGAGAGCTCA 5744802 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||||| || || | ||||| || || || || | || || Sbjct 5744803 GACACCATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGGATCCCTCCGGAACAG 5744862 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | || || | ||||| |||||||| || || | || || || ||||||||| Sbjct 5744863 AAGAGACTTATCTTTGCGGGTAAACAGCTCGAGGATGGCCGTACTCTTGCGGACTACAAC 5744922 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461 ||||||||||| | || ||||| | || || ||||| Sbjct 5744923 ATCCAAAAGGAGTCAACTCTGCACCTTGTCCTTCGTTT 5744960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499999171264640