Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq7 82.4 4e-11 >seq7 Length=29178675 Score = 82.4 bits (90), Expect = 4e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 ||||||| || || ||||| |||||||| || || | ||||| ||||| || || ||| Sbjct 28704362 TACCTTTCCTCTTGCCTCCTCCTTGATCAACATACCGAGCAGTATCATTAAACACCCTCA 28704303 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 ||| ||||| | ||| | || ||| || |||| | |||| | ||| || | | Sbjct 28704302 GCATCGGAACAATACCATTAGATTCTCCATTCGTGCCACGAATATAACTTCCAGTAGCAC 28704243 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTG 26243 |||| ||| || ||| || |||||||| |||| ||||||||||| ||| Sbjct 28704242 GGATATTATGAATCGAAACACCAATACCACCAGCTGATTTACTTATAGCTGCACACTCTT 28704183 Query 26244 AAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 | ||||| | ||||| | || |||||| | ||||| Sbjct 28704182 TCAACGTATCATATATTCCCTCAATACTATCATCCTTCAT 28704143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252954356318825