Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3 136 7e-27 seq6 113 8e-20 seq4 113 8e-20 seq7 96.9 6e-15 seq5 93.3 8e-14 seq8 89.7 9e-13 seq1 89.7 9e-13 >seq3 Length=27950219 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || |||| || ||||| | || | || ||| ||| |||||||| Sbjct 14806204 ATCCCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATCC 14806145 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | ||| | || || | |||||| |||||||| || | |||||||| ||| || Sbjct 14806144 GCAAGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGA 14806085 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || ||||| || ||| ||| ||||| || || | ||| || Sbjct 14806084 GGGATTCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATGGTGTATGAGCTCTCG 14806025 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| ||||||||||||||||| | ||| || | ||||||||||| Sbjct 14806024 ACTTCTAGGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCAT 14805975 Score = 98.7 bits (108), Expect = 2e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 171878 CTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAA 171937 |||||| |||||| ||||| | ||||| || | || || | || || || |||| Sbjct 5226116 CTCTTTCTGAATATTGTAATCAGCTAAAGTCCGACCATCTTCTAGCTGCTTCCCGACAAA 5226175 Query 171938 AATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 171997 |||| ||||||||||| ||||| || |||||||| |||||||| || || || || Sbjct 5226176 GATTAGCCTCTGTTGGTCCGGTGGAATCCCTTCTTTGTCTTGTATCTTTGCCTTCACGTT 5226235 Query 171998 AGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 | || ||||| || ||||| || |||||||||||||| || || || | ||| Sbjct 5226236 ATCAATCGTATCAGAGCTCTCTACCTCAAGAGTAATGGTTTTCCCTGTCAAAGATTT 5226292 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| ||||| | | || || | || || | |||||||| ||||| || | |||| Sbjct 5226639 ATATTGTAATCCGCAAGAGTACGACCATCCTCTAGCTGTTTACCGGCAAAGATAAGTCTC 5226698 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 |||||||| || | ||||||||||||||||| || || ||| || || || || Sbjct 5226699 TGTTGGTCCGGAGAGATTCCTTCTTTATCTTGGATCTTGGCTTTGACGTTGTCAATGGTG 5226758 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| ||| || || || || |||||||| ||||||| ||||| | || || ||| Sbjct 5226759 TCTGAGCTTTCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGGTTTTCACAAAGATTTGC 5226818 Query 172068 AT 172069 || Sbjct 5226819 AT 5226820 >seq6 Length=37079636 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || |||| || ||||| | || | || || ||| |||||||| Sbjct 33565313 ATCCCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATCC 33565254 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | ||| | || || | |||||| |||||||| || | |||||||||||| || Sbjct 33565253 GCAAGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGA 33565194 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || || || || || ||||| || Sbjct 33565193 GGGATCCCTTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCA 33565134 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| ||||| ||||||||||| | ||||| | || |||||||| Sbjct 33565133 ACTTCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || || |||| ||| || ||||| || || Sbjct 13447916 ATACCACCCCGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCA 13447857 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | || || || ||||| || || ||||| ||||| ||| Sbjct 13447856 GCCAAGGTACGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGT 13447797 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || || || || ||||| || || || Sbjct 13447796 GGAATACCTTCCTTATCTTGGATCTTTGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCC 13447737 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| |||||||| || || |||| ||| || ||||| Sbjct 13447736 ACCTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 104 bits (114), Expect = 4e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| | | || ||| | || || | || ||||| ||||| || | ||| Sbjct 33565037 ATGTTGTAATCCGCAAGAGTTCGACCATCCTCGAGCTGCTTACCGGCAAAGATCAGCCTC 33564978 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||| || || |||||||| || ||||| |||||| ||| ||||| || || Sbjct 33564977 TGCTGGTCCGGAGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTGTCAATGGTG 33564918 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| || |||||||| ||||| ||||||||||| | ||| || | ||||||| | Sbjct 33564917 TCTGAGCTCTCGACTTCTAGGGTAATCGTTTTACCAGTAAGTGTCTTGACAAATATCTAC 33564858 Query 172068 AT 172069 || Sbjct 33564857 AT 33564856 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| | | || | ||| | ||||| ||| || ||||| ||||| Sbjct 13447396 ATACCACCACGAAGCCTGAGCACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCC 13447337 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || |||| || | || || ||||| || || || ||||| || || || Sbjct 13447336 GCAAGAGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGA 13447277 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || ||| ||| || ||| || || || || || Sbjct 13447276 GGAATACCTTCCTTATCTTGAATCTTAGCTTTCACGTTATCGATGGTGTCAGAACTCTCA 13447217 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || |||||||| ||||||||||| || || || | || |||||||| Sbjct 13447216 ACCTCGAGAGTAATAGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13447167 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | || | ||| || ||| || || || Sbjct 19969758 ATACCACCACGAAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCG 19969817 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | ||| | || | || || | || || ||||||||||| | | ||| ||||| || Sbjct 19969818 GCTAAGGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGA 19969877 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || || || || || || ||||| ||||| || Sbjct 19969878 GGGATCCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTCG 19969937 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || |||||||| |||||||| || || || | ||| |||||||| Sbjct 19969938 ACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 19969987 Score = 91.5 bits (100), Expect = 3e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 171872 AGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACC 171931 ||| | |||||| ||| || || || | ||| | || | || || | |||||| || Sbjct 33565509 AGTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGTTGTTTTCC 33565450 Query 171932 AGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 171991 ||||| |||| ||||| ||||| || || || ||||| |||||||| || || ||| Sbjct 33565449 CGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTCGCTTT 33565390 Query 171992 TACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 172051 ||||| || ||||| || ||| || || ||||| || || || || || || || Sbjct 33565389 CACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTATCGTCTTTCCCGTCAAAGT 33565330 Query 172052 TTTAATGAATATCTGCAT 172069 || | ||||||||||| Sbjct 33565329 CTTGACAAATATCTGCAT 33565312 >seq4 Length=23266485 Score = 113 bits (124), Expect = 8e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 171923 TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTAT 171982 ||||||||| ||||| |||||||| || ||||| || || || |||||||||||||| || Sbjct 5748390 TTGTTTACCGGCAAAGATTAATCTTTGCTGGTCCGGAGGGATCCCTTCTTTATCTTGAAT 5748331 Query 171983 TTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACC 172042 || ||| ||||| || |||||||| || |||||||| |||||||||||||| Sbjct 5748330 CTTCGCTTTAACATTGTCAATGGTATCTGAGCTCTCAACTTCTAGGGTAATGGTTTTACC 5748271 Query 172043 AGTTAATGTTTTAATGAATATCTGCAT 172069 || | | || | ||||||||||| Sbjct 5748270 CGTAAGCGCCTTGACAAATATCTGCAT 5748244 Score = 111 bits (122), Expect = 3e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 |||||||| ||||| |||| || ||||||||||| || ||||||||||||||||| || Sbjct 5744492 TGTTTACCCGCAAAGATTAGCCTTTGTTGGTCAGGAGGGATTCCTTCTTTATCTTGAATC 5744433 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || || || || || |||||||| || |||||||| |||||| |||||||| Sbjct 5744432 TTCGCCTTGACGTTGTCAATTGTATCTGAACTCTCAACTTCTAGGGTAATGATTTTACCA 5744373 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || | |||||| | || || ||||| Sbjct 5744372 GTGAGTGTTTTCACAAAGATTTGCAT 5744347 Score = 100 bits (110), Expect = 5e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 |||| | ||||||||||| | || || | ||| | ||||| |||||| || || | Sbjct 12669225 TCATGGTTCCACCTCTAAGCCTCAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGT 12669166 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 |||| | ||| | ||| | || || | ||| |||||||||||||| | |||||||| | Sbjct 12669165 AATCAGCTAAGGTTCGACCATCTTCAAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGAT 12669106 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATTT 171984 |||||||||| |||||||| || | || || Sbjct 12669105 CAGGTGGTATACCTTCTTTGTCCTATAATT 12669076 Score = 96.9 bits (106), Expect = 6e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 171872 AGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACC 171931 ||| | |||||| ||| || || || | ||||| || | || || | |||||| || Sbjct 5738660 AGTTGACTCTTTCTGAATGTTGTAGTCCGCTAAAGTCCGACCATCCTCTAGTTGTTTTCC 5738601 Query 171932 AGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 171991 | ||| |||| ||||||||||| | || |||||||| || ||||| || || || Sbjct 5738600 GGTAAAGATTAGCCTCTGTTGGTCCAGAGGGATTCCTTCCTTGTCTTGAATCTTCGCCTT 5738541 Query 171992 TACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 172051 | || ||||| ||||| || |||||||| ||||| ||||||||||| | || Sbjct 5738540 GATGTTGTCAATAGTGTCTGAGCTCTCAACTTCTAGGGTAATAGTTTTACCAGTAAGCGT 5738481 Query 172052 TTTAATGAATATCTGCAT 172069 || | ||||||||||| Sbjct 5738480 CTTGACAAATATCTGCAT 5738463 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 |||||||| ||||| || | ||||| || || || || || ||||| || ||||| || Sbjct 5744888 TGTTTACCCGCAAAGATAAGTCTCTTCTGTTCCGGAGGGATCCCTTCCTTGTCTTGAATC 5744829 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 ||| ||| ||||| || || ||||| || |||||||| |||||||||||| Sbjct 5744828 TTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATGGTTTTATTG 5744769 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || | || || | ||||||||||| Sbjct 5744768 GTAAGCGTCTTGACAAATATCTGCAT 5744743 >seq7 Length=29178675 Score = 96.9 bits (106), Expect = 6e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | |||| || ||||| | ||| | || || |||||| ||||| Sbjct 2571071 ATTCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCC 2571012 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | ||| | || || | |||||||||||||| || | ||||||| ||| || Sbjct 2571011 CCAAGGGTTCGACCATCCTCGAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCTGGA 2570952 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || || || | || | ||||| || Sbjct 2570951 GGGATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCA 2570892 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||||| ||||| ||||||||||| | |||||| | ||||| |||||| Sbjct 2570891 ACTTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCATT 2570841 Score = 84.2 bits (92), Expect = 4e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171867 TGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGT 171926 |||| ||| | ||| || || || ||||| | | || || | || || | |||| Sbjct 2570816 TGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGAGTACGACCATCCTCGAGTTGT 2570757 Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 |||||||| || || | ||||||| ||| || || || ||||| |||||||| || || Sbjct 2570756 TTACCAGCGAAGATGAGCCTCTGTTCGTCCGGAGGGATCCCTTCCTTATCTTGGATCTTC 2570697 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 || || | || | ||||| || ||||||| ||||| ||||||||||| Sbjct 2570696 GCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACTTCTAAGGTAATAGTTTTACCAGTG 2570637 Query 172047 AATGTTTTAATGAATATCTGCATT 172070 | |||||| | ||||| |||||| Sbjct 2570636 AGTGTTTTCACAAATATTTGCATT 2570613 >seq5 Length=22804910 Score = 93.3 bits (102), Expect = 8e-14 Identities = 294/445 (66%), Gaps = 13/445 (3%) Strand=Plus/Plus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 ||| || || ||| |||| | ||||| ||||| || || || |||| ||| || || Sbjct 2412019 TTTCTGATAATCACCAACTCTCTTTTCAAAAAAATTAGTCTTCCCTTGTAAACTAATCAA 2412078 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATAC--ATAT 38948 | ||| ||||||| ||||| | | ||| | ||| | | || | | | | || Sbjct 2412079 CTCCATCCAATCAAAAGGATTACTCACACCATAC-ACTTTAC-CATACCCAAGCGCACAT 2412136 Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008 || || ||||| || ||||| |||| ||| || ||| ||||||| ||||||||| | Sbjct 2412137 AACAACCTATCCGCAACAAACTCAATATACTGACTCATCAATTCACCATTCATACCAACC 2412196 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068 || | | || | || ||| | ||| ||| | || || || || || | || Sbjct 2412197 AACGCACAAGGAAGCGCTTCACATACAAACTCTCTCTCAATCTCAACCGCATCGCAAACA 2412256 Query 39069 atcataattatattattttttga-taa--tttatatttaatatgattcgcatataGTAAA 39125 || | | || | | ||| | | ||| || || ||| | || | || | ||| Sbjct 2412257 AT-AGACTTC-ACTCTTTCCTCACTAAGCTTGGTACGTAACA-GAGTG---TAAATCAAA 2412310 Query 39126 CATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 39185 || || ||||| |||||||||||||| || || || ||||| ||| |||||||| Sbjct 2412311 CAAGCGAAATCACAGTGTAAACCTTCGTCTCTTGAGATTAATTCGTTAGAGAAAGTTAAA 2412370 Query 39186 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 39245 || ||||| | ||| | || |||||||| || || || || || ||| |||||| Sbjct 2412371 CCAGGCATGAGTCCACGTTTCTTAAGCCAGAAAATCGAACAGAAGGAACCAGAGAAGAAT 2412430 Query 39246 ATACCCTCCACACACGCAAATGCTA 39270 ||||| || ||||| || || |||| Sbjct 2412431 ATACCTTCAACACAAGCGAACGCTA 2412455 Score = 87.8 bits (96), Expect = 3e-12 Identities = 176/260 (68%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 39416 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGC 39475 ||||||||| || ||||| | | || ||||| ||||| ||| || ||| | || Sbjct 2412598 AGAATACATCTCTGAATGGATATTCTCAATAGCGATTTGGAATCCGTAGAATGCACGCGC 2412657 Query 39476 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATC 39535 ||| || || || || || | ||||||| | | | || || ||| || || || Sbjct 2412658 TTCGGAGACTTGTACATCTGACATGAATCGTGAAGCGAGGTTTTCGAGTACGATTCCGTC 2412717 Query 39536 AGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT 39595 |||||| |||||||| || | || | ||| || || || ||| || || | ||| Sbjct 2412718 AGATGCGGCGAAGAAAGCGAGTACGTGTTTGATGAAGTGACGTTCTCCGTCGTTGAGATT 2412777 Query 39596 TTCCCAAGATTCAAGATCGTTT---GATAAATCTACTTCTTCTATTGTCCAAAAAGATGC 39652 |||||| ||| | | || | || | |||||||||||| |||||| || ||||| Sbjct 2412778 TTCCCAG---TCACGGTTGTCTTGTGAGAGATCTACTTCTTCGGCTGTCCAGAATGATGC 2412834 Query 39653 TACGGATTTTTTATACATTT 39672 | ||| ||| || ||||||| Sbjct 2412835 TTCGGCTTTCTTGTACATTT 2412854 >seq8 Length=40886855 Score = 89.7 bits (98), Expect = 9e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | ||| || | || ||||| | ||| | || || || || ||||| | Sbjct 1188620 CCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCA 1188679 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || | | | || || | ||| ||||| || || || | |||||| || || || || Sbjct 1188680 AGAGTCCTTCCATCTTCAAGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGGA 1188739 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||| || || || || ||| || ||||| ||| || ||||| || || Sbjct 1188740 ATCCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACC 1188799 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||||||||| | || || | |||||||||||| Sbjct 1188800 TCAAGGGTAATGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 1188846 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || | || | || | |||||| || || ||||| Sbjct 1189826 ATACCACCACGAAGACGCAAGACAAGGTGGAGTGTGGACTCTTTCTGGATGTTGTAATCC 1189885 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || | | | || || | || |||||||| || || | ||| || || || || Sbjct 1189886 GCAAGAGTCCTTCCATCTTCAAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGA 1189945 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || ||| || |||||| |||||||| || ||| Sbjct 1189946 GGAATTCCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATAGTATCGGAGCTTTCA 1190005 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| || || || || || || | || || ||||| Sbjct 1190006 ACCTCAAGAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 1190055 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | ||| | || || || || || | ||| || ||||| || || Sbjct 1190054 ATACCACCTCTCAATCGGAGAACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAGTCG 1190113 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || | | | || || | ||| |||||||| || || | ||| || || || || Sbjct 1190114 GCAAGAGTCCTTCCATCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGA 1190173 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || || || |||||| ||||| || || || Sbjct 1190174 GGAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTATCGATAGTGTCAGAGCTCTCG 1190233 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| ||||| || ||||| | ||||| | |||||| ||||| Sbjct 1190234 ACCTCGAGAGTTATGGTCTTTCCAGTAAGAGTTTTCACGAATATTTGCAT 1190283 >seq1 Length=25238555 Score = 89.7 bits (98), Expect = 9e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 |||| | ||||| ||||| | || || ||||| | || | |||||| ||| || | Sbjct 21980164 TCATGGTTCCACCCCTAAGCCTCAAAACCAAATGAAGCGTCGACTCTTTCTGAATGTTGT 21980223 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 | || | || | || | || || | ||||||||||||||| || ||||||||||| | Sbjct 21980224 AGTCCGCTAGTGTACGACCATCTTCAAGTTGTTTACCAGCAAAGATCAATCTCTGTTGAT 21980283 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATT 171983 | ||||||||||| ||||| || ||| || Sbjct 21980284 CTGGTGGTATTCCCTCTTTGTCCTGTTTT 21980312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904821793351800