Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq18845 150 2e-30 >seq18845 Length=505 Score = 150 bits (166), Expect = 2e-30 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || |||||||||||||| || | | || Sbjct 418 GCTTGGCCAATTCTCCGGGCAGGAGGAGACGGACAGCGGTCTGGATCTCCCGAGAGGTGA 359 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| |||| || ||||||| |||||||| | |||| | |||| | Sbjct 358 TGGTGGACCTCTTGTTGTAGTGGGCGAGACGGCTGGCCTCGGCGGCGATCCTCTCGAAGA 299 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||||| | |||| ||||||| || |||||||| Sbjct 298 TGTCGTTCACGAACGAGTTCATGATGGACATGGCCTTGCTGGAGATACCGGTGTCGGGGT 239 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || || ||||| ||||| ||| Sbjct 238 GGACTTGTTTCAGCACTTTGTAAATG 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104860181688407