Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 156 4e-33 seq6 138 1e-27 seq1 131 2e-25 seq4 120 3e-22 seq7 107 2e-18 seq8 102 7e-17 seq5 102 7e-17 >seq3 Length=27950219 Score = 156 bits (172), Expect = 4e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24702 CGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA 24761 ||||||| ||||| | ||||| || || || || || || || || || || ||| | Sbjct 5227050 CGATGCAAATCTTCGTGAAAACTCTTACGGGCAAGACCATAACACTTGAGGTCGAAAGCT 5226991 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||||| || |||| || || ||||||||||||||||||||||| ||||| || | Sbjct 5226990 CCGACACCGTCGAAAACGTCAATGCCAAGATCCAAGACAAAGAAGGAATCCCTCCGGACC 5226931 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 ||||| | | ||||||||||| |||||||| ||||| | | | || | ||||| | Sbjct 5226930 AACAAAGGCTTATCTTTGCCGGTAAACAGCTCGAGGACGGCCGTACCTTGGCTGATTACA 5226871 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| |||||||| || || || |||||||| |||| ||| | ||||| Sbjct 5226870 ACATCCAAAAGGAGTCAACTCTCCACTTGGTTCTGCGTTTGAGAGGAGG 5226822 Score = 132 bits (146), Expect = 4e-26 Identities = 155/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| ||||| || ||||| || || ||||| || ||| | | Sbjct 5226820 ATGCAAATCTTTGTGAAAACCCTAACTGGCAAAACCATAACACTCGAGGTCGAAAGCTCA 5226761 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| ||||||||||| |||| || ||| Sbjct 5226760 GACACCATTGACAACGTCAAAGCCAAGATCCAAGATAAAGAAGGAATCTCTCCGGACCAA 5226701 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | | ||||||||||| |||||||| |||||| ||| | | || | ||||| | Sbjct 5226700 CAGAGACTTATCTTTGCCGGTAAACAGCTAGAGGATGGTCG-TACTCTTG-CGGATTACA 5226643 Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907 | || ||||||||||| ||||| ||| Sbjct 5226642 ATATCCAAAAGGAATCAACACTTCAC 5226617 Score = 127 bits (140), Expect = 2e-24 Identities = 158/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || || || |||||||| ||||| || ||||| || | | Sbjct 14805974 GATGCAGATATTTGTCAAGACACTTACTGGTAAAACCATTACCCTAGAAGTCGAGAGCTC 14806033 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||| | || | || ||| ||||| |||||||| |||||||| ||||| || | Sbjct 14806034 ATACACCATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATCCCTCCGGACTA 14806093 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880 ||| | | |||||||| || ||||| || |||||| |||| | | || | |||||| Sbjct 14806094 ACAGAGACTCATCTTTGCTGGAAAACAACTTGAGGATGGTCGA-ACGCTTG-CGGATTAT 14806151 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||||| |||||||| || || || |||||| Sbjct 14806152 AACATTCATAAGGAATCAACCCTGCATTTGGTG 14806184 >seq6 Length=37079636 Score = 138 bits (152), Expect = 1e-27 Identities = 160/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || |||||||||||||| || ||||| || | | Sbjct 33565084 ATGCAGATCTTTGTGAAAACCCTCACTGGTAAAACTATTACCCTAGAAGTTGAGAGCTCA 33565143 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || ||||| || ||| Sbjct 33565144 GACACCATTGACAACGTCAAGGCGAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAA 33565203 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | | |||||||| || ||||| || |||||| |||| | | || | ||||||| Sbjct 33565204 CAGAGACTCATCTTTGCTGGAAAACAACTTGAGGATGGTCGA-ACGCTTG-CGGATTATA 33565261 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||||| |||||||| || || || |||||| Sbjct 33565262 ACATTCAGAAGGAATCAACCCTGCATTTGGTG 33565293 Score = 129 bits (142), Expect = 5e-25 Identities = 171/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||| |||| ||| | || || || || |||||||| ||||| || ||||| || | | Sbjct 33564855 GATGTAGATATTTGTCAAGACACTTACTGGTAAAACGATTACCCTAGAAGTCGAGAGCTC 33564914 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || || | |||| | ||| || |||||||| |||||||| ||||| || | Sbjct 33564915 AGACACCATTGACAATGTTAAAGCTAAA-ATTCAAGACAAGGAAGGAATCCCTCCGGACC 33564973 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTA 24879 | || | ||||||||||||| || ||||| |||||| |||| | | || | ||||| Sbjct 33564974 AGCAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGA-ACTCTTG-CGGATTA 33565031 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || |||||||| || || |||||||| | | ||| | ||||| Sbjct 33565032 CAACATCCAGAAGGAATCAACCCTCCACTTGGTCCTCAGGTTGAGAGGAGG 33565082 Score = 125 bits (138), Expect = 6e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | ||||| || ||||| || ||||| || ||||| || ||| | Sbjct 19970672 GATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGTTC 19970613 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| ||| | || ||||||||| || || ||||| ||||| |||| Sbjct 19970612 TGACACGATCGACAACGTTAAGGCTAA-GATCCAAGATAAGGAGGGAATTCCTCCGGATC 19970554 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | |||||||| || || || ||| |||| ||| | | | || | ||||| | Sbjct 19970553 AGCAGAGATTGATCTTCGCTGGAAAGCAGTTGGAAGATGGCCGTACCTTGGCGGATTACA 19970494 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 | || || ||||| ||||| || |||||||| Sbjct 19970493 ATATCCAGAAGGAGTCGACTCTTCACTTGGT 19970463 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || | || ||||| || ||||| ||||| || || | | Sbjct 13447687 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACTCTCGAGGTGGAGAGCTCT 13447746 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||| || ||||| || || || || || Sbjct 13447747 GACACTATTGACAACGTGAAGGCAAAGATCCAAGATAAGGAAGGTATTCCACCGGACCAG 13447806 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| || ||||| |||||| | | | || | || || || Sbjct 13447807 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCTGACTACAAT 13447866 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| || ||| | |||||||||||||| Sbjct 13447867 ATCCAAAAGGAGTCTACATTGCACTTGGTGTTGCG 13447901 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | ||||| || ||||| || || || || ||||| || ||| | Sbjct 13446938 GATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACAATCACTCTCGAGGTGGAAAGTTC 13446997 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || ||| ||||| || || || ||||| || ||||| ||||| Sbjct 13446998 TGATACGATCGACAATGTTAAAGCGAAGATTCAGGATAAGGAAGGGATTCCTCCGGATCA 13447057 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||| || || || || |||| ||| | | | | || | ||||| || Sbjct 13447058 GCAGAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGGCGTACCTTGGCGGATTACAA 13447117 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || |||||||| || || |||||||||||||| Sbjct 13447118 TATCCAGAAGGAATCAACTCTTCACTTGGTGTTGCG 13447153 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || ||||| ||||| || || | | Sbjct 19969987 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTCGAGAGCTCA 19969928 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||||||||| || ||||| || || Sbjct 19969927 GACACTATTGACAACGTCAAGGCCAAGATCCAGGACAAAGAAGGGATCCCTCCGGACCAG 19969868 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || ||||| || || ||||| |||||| | | | | | || || ||| Sbjct 19969867 CAGCGTCTCATTTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACCTTAGCCGACTACAAC 19969808 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||| ||||| ||||| || |||||||| ||||| Sbjct 19969807 ATTCAGAAGGAGTCGACCCTTCACTTGGTCTTGCG 19969773 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || || ||||| | ||||| ||| | || Sbjct 13447395 ATGCAGATCTTTGTCAAGACCTTGACGGGCAAGACCATTACTTTGGAAGTTGAAAGCTCC 13447454 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||||||| || || ||||| || || Sbjct 13447455 GATACTATTGATAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 13447514 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| ||||| || ||||| || || |||| || | ||||| ||| Sbjct 13447515 CAGAGATTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCAGAACTTTGGCTGATTACAAC 13447574 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || || || || || || ||||||||||| Sbjct 13447575 ATCCAGAAAGAGAGTACTCTTCATTTGGTGTTGCG 13447609 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | |||||||| || || || | ||||| ||| | || Sbjct 19970215 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACCATCACCTTGGAAGTTGAAAGCTCC 19970156 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||| |||||||| || || ||||| || || Sbjct 19970155 GACACCATTGACAACGTCAAGGCCAAA-ATCCAGGACAAAGAGGGTATTCCTCCGGACCA 19970097 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||| || ||||| || || || ||||| |||| || | || || || Sbjct 19970096 GCAAAGATTGATTTTCGCCGGAAAGCAACTCGAGGACGGCAGAACTCTGGCCGACTACAA 19970037 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || || || || || || || ||||||||||| Sbjct 19970036 TATCCAGAAAGAGTCTACTCTCCATTTGGTGTTGCG 19970001 Score = 104 bits (114), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || | || ||||| |||||||| ||||| || || | Sbjct 19970443 ATGCAGATCTTCGTTAAGACCTTGACTGGTAAGACTATTACCCTCGAGGTTGAGAGTTCT 19970384 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || |||||||||||| || ||||| ||||| ||||| Sbjct 19970383 GACACCATTGATAACGTTAAGGCTAA-GATCCAAGACAAGGAGGGAATTCCTCCGGATCA 19970325 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || | |||||||||||||| || || || ||||| Sbjct 19970324 GCAGAGGTTGATCTTTGCCGGAAAGCAACTTGAGGA 19970289 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || |||||||||||||| ||||| || || | Sbjct 13447167 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAAACTATTACTCTCGAGGTTGAGAGTTCT 13447226 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| ||||| || ||||| || ||||| ||||| Sbjct 13447227 GACACCATCGATAACGTGAAAGCTAAGATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 13447286 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || | |||||||| || || || ||||| ||||| Sbjct 13447287 CAGAGGTTGATCTTCGCTGGAAAGCAGCTTGAGGA 13447321 >seq1 Length=25238555 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| ||||| || || || || || || || || ||| | | Sbjct 18011245 ATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTCA 18011304 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| ||||| |||||||| |||||||| || || || ||| Sbjct 18011305 GACACAATTGACAATGTGAAAGCGAAGATTCAAGACAAGGAAGGAATTCCACCGGACCAA 18011364 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || ||||| | || || |||| | | ||||| | | Sbjct 18011365 CAACGTTTGATCTTTGCAGGAAAACAATTAGAAGACGGAAGAACACTCGCTGATTACAGC 18011424 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||||| || || || ||||| | ||||| | ||||| Sbjct 18011425 ATCCAGAAAGAATCAACGCTTCATTTGGTTCTACGATTAAGAGGAGG 18011471 >seq4 Length=23266485 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || ||||| || ||| | | Sbjct 22703429 GATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATCACTCTCGAGGTTGAATCATC 22703370 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| ||| | || | || || |||||||||||||| |||||||| || || ||||| Sbjct 22703369 CGATACAATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGATCA 22703310 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| || ||||| ||||| ||||| || || || | | || | || || || Sbjct 22703309 ACAACGATTAATCTTCGCCGGAAAACAACTCGAAGACGGACGTACTCTGGCTGACTACAA 22703250 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || |||||||| || || || Sbjct 22703249 CATCCAGAAGGAATCAACGCTTCA 22703226 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| |||||| | ||||| || || ||||||| ||||| || ||||| || | Sbjct 5744346 GATGCAAATCTTTGTGAAAACACTCACTGGTAAAATCATTACCCTAGAAGTTGAGAGTTC 5744405 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | || | || || ||||| ||||| ||||||||||| ||||| || || Sbjct 5744406 AGATACAATTGACAACGTCAAGGCGAAGATTCAAGATAAAGAAGGAATCCCTCCTGACCA 5744465 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | | |||||||| || |||||||| || ||| | | | | || || || Sbjct 5744466 ACAAAGGCTAATCTTTGCGGGTAAACAGCTCGAAGATGGTTGTACTCTTGCGGACTACAA 5744525 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || |||||||| || || |||||||| Sbjct 5744526 CATCCAGAAGGAATCAACCCTCCACTTGGT 5744555 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || ||||| || |||||||||||||| || ||||| || | | Sbjct 5738463 ATGCAGATATTTGTCAAGACGCTTACTGGTAAAACTATTACCCTAGAAGTTGAGAGCTCA 5738522 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | | || ||||| |||||||| |||||||| |||| || ||| Sbjct 5738523 GACACTATTGACAACATCAAGGCGAAGATTCAAGACAAGGAAGGAATCCCTCTGGACCAA 5738582 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||| |||| ||||| || |||||| | | | | || || ||| Sbjct 5738583 CAGAGGCTAATCTTTACCGGAAAACAACTAGAGGATGGTCGGACTTTAGCGGACTACAAC 5738642 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| || || || || || ||| Sbjct 5738643 ATTCAGAAAGAGTCAACTCTTCAC 5738666 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || |||| || |||||||| ||||| || ||||| || | | Sbjct 5748244 ATGCAGATATTTGTCAAGGCGCTTACGGGTAAAACCATTACCCTAGAAGTTGAGAGCTCA 5748303 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||| ||||| |||||||| || ||||| || || Sbjct 5748304 GATACCATTGACAATGTTAAAGCGAAGATTCAAGATAAAGAAGGGATCCCTCCGGACCAG 5748363 Query 24824 CAACGTTTGATCTTTGCCGGGAAACA 24849 ||| | || ||||||||||| ||||| Sbjct 5748364 CAAAGATTAATCTTTGCCGGTAAACA 5748389 >seq7 Length=29178675 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||||||||| | ||||| || | | Sbjct 2570842 ATGCAAATATTTGTGAAAACACTCACTGGTAAAACTATTACCTTAGAAGTTGAGAGCTCA 2570901 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || || || ||||||||||| || ||||| || ||||| || || Sbjct 2570902 GACAGCATTGACGACGTCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCAGACGAA 2570961 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || |||||||| |||||| ||| | | ||||| || Sbjct 2570962 CAGAGGCTCATCTTTGCTGGTAAACAGCTCGAGGATGGTCGAACCCTTGGGGATTACAAT 2571021 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || || || |||||| | || ||| | || || Sbjct 2571022 ATTCAGAAGGAATCAACTCTGCATTTGGTGCTACGTTTGAGAGGTGG 2571068 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| |||||| |||| || || || || || || || || ||||| || ||| | | Sbjct 2570385 GATGCAAATCTTTGTTAAGACTCTTACAGGCAAGACCATAACCCTCGAGGTCGAAAGCTC 2570444 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || || ||||||||||| || ||||| || ||||| || | Sbjct 2570445 AGAAACCATTGACGATGTCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCGGACGA 2570504 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880 ||| | | ||||| || || ||||| || |||||| ||| | || || | ||||| Sbjct 2570505 ACAGAGGCTTATCTTCGCTGGTAAACAACTCGAGGATGGTCG-TACACTTG-CGGATTAC 2570562 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || |||||| | || | || || ||||| || Sbjct 2570563 AACATCCAGAAGGAGTCAACTCTACACCTTGTTCTTCGTTTACGCGGTGG 2570612 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || |||||||||||||| | ||||| || | | Sbjct 2570614 ATGCAAATATTTGTGAAAACACTCACTGGTAAAACTATTACCTTAGAAGTTGAGAGCTCA 2570673 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || || || ||||||||||| || ||||| || ||||| || || Sbjct 2570674 GACAGCATTGACGACGTCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCGGACGAA 2570733 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | | ||||| || || ||||| || |||||| ||| | | || | ||||| | Sbjct 2570734 CAGAGGCTCATCTTCGCTGGTAAACAACTCGAGGATGGTCG-TACTCTTG-CGGATTACA 2570791 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || ||||| || || |||||| | || | || || ||||| || Sbjct 2570792 ACATCCAGAAGGAGTCAACTCTACACCTTGTCCTTCGTTTACGCGGTGG 2570840 >seq8 Length=40886855 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || |||||||| ||||| || || || || | | Sbjct 1188846 ATGCAGATATTCGTGAAGACCCTCACTGGTAAAACCATTACCCTTGAGGTGGAGAGCTCA 1188787 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||| | || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 1188786 GACACAATAGACAATGTGAAGGCTAAGATTCAGGACAAGGAAGGGATTCCTCCGGATCAG 1188727 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| ||||| || || || || ||| || | | | ||||| ||| Sbjct 1188726 CAGAGACTTATCTTCGCCGGTAAGCAACTTGAAGATGGAAGGACTCTTGCGGATTACAAC 1188667 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||||||||| || || ||||| Sbjct 1188666 ATCCAGAAGGAATCGACTCTTCATTTGGT 1188638 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || ||||| ||||| || | || || || | | Sbjct 1189827 ATGCAGATCTTTGTGAAGACCCTTACTGGTAAGACTATCACTTTGGAGGTGGAGAGCTCA 1189768 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| |||||||| || || ||||| Sbjct 1189767 GACACTATTGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCACCGGATCAG 1189708 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || | | ||||||||||| || ||||| |||||| Sbjct 1189707 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGAT 1189672 >seq5 Length=22804910 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || ||||| || ||| | | Sbjct 22133577 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACTCTCGAGGTTGAATCATC 22133636 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || ||| |||||||||||||| |||||||| || || || || Sbjct 22133637 AGATACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGACCA 22133696 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 |||||||| ||||| || || ||||| || || || Sbjct 22133697 GCAACGTTTAATCTTCGCTGGAAAACAACTCGAAGA 22133732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449741423671880