Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq18845 185 1e-40 >seq18845 Length=505 Score = 185 bits (204), Expect = 1e-40 Identities = 189/245 (77%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| || || ||||| |||||| |||||| ||| ||| ||| Sbjct 457 TGTACTTGGTCACAGCCTTGGTGCCTTCAGAGACAGCGTGCTTGGCCAATTCTCCGGGCA 398 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 || || || || |||||||||||||| || | | ||| ||| | |||||| ||| Sbjct 397 GGAGGAGACGGACAGCGGTCTGGATCTCCCGAGAGGTGATGGTGGACCTCTTGTTGTAGT 338 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || |||| |||||||| | |||| | |||| |||||||| || |||||||| Sbjct 337 GGGCG--AGACGGCTGGCCTCGGCGGCGATCCTCTCGAAGATGTCGTTCACGAACGAGTT 280 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| ||||||| || ||||||||| || || || ||||| || Sbjct 279 CATGATGGACATGGCCTTGCTGGAGATACCGGTGTCGGGGTGGACTTGTTTCAGCACTTT 220 Query 1485708 GTAAA 1485712 ||||| Sbjct 219 GTAAA 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913292272066469