Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6 161 8e-35 seq3 147 2e-30 seq1 143 2e-29 seq8 127 2e-24 seq7 120 2e-22 seq5 120 2e-22 seq4 111 1e-19 >seq6 Length=37079636 Score = 161 bits (178), Expect = 8e-35 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| ||||||||||| || || ||||| || |||||||||||||||||| Sbjct 33565310 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATCCGCA 33565251 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || |||||||| |||||| | || | ||| || || ||||| || Sbjct 33565250 AGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGG 33565191 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| ||| || | ||||| | || | ||||| || || || Sbjct 33565190 ATCCCTTCCTTGTCTTG-AATCTTCGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAAC 33565132 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || |||||||| ||||| | |||||| ||||| |||||||| Sbjct 33565131 TTCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084 Score = 138 bits (152), Expect = 9e-28 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||| | |||||| || || || || || || || |||||||||| || ||| || Sbjct 13447378 AGCACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGTACGACCGTCC 13447319 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || || || ||||| | ||||| || ||||||||||| |||||||| || || ||| Sbjct 13447318 TCAAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCTTCCTTATCT 13447259 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||| || | || | ||||||||| || || || ||||| ||||| Sbjct 13447258 TG-AATCTTAGCTTTCACGTTATCGATGGTGTCAGAACTCTCAACCTCGAGAGTAATAGT 13447200 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||| ||||| || ||||| |||||||| Sbjct 13447199 TTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 13447167 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||| ||||| || ||||| || || || || |||||||| | ||| || Sbjct 13447154 ACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATATTGTAATCCGCCAAGGTACGCCC 13447095 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| || ||||| | |||||||| ||||||||||| ||||| || || || Sbjct 13447094 ATCTTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATCCCTTCCTT 13447035 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | ||| ||| | || | || |||||| ||| || || ||||| | Sbjct 13447034 ATCCTG-AATCTTCGCTTTAACATTGTCGATCGTATCAGAACTTTCCACCTCGAGAGTGA 13446976 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || | ||||| ||||| |||||||| Sbjct 13446975 TTGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 13446939 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||||||||| || ||||| || ||||| ||||| || | || | Sbjct 13447610 ACGCAACACCAAATGAAGAGTACTCTCTTTCTGGATGTTGTAATCAGCCAAAGTTCTGCC 13447551 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || || || | |||||||| ||||| ||||| |||||||||||||| Sbjct 13447550 GTCTTCAAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCCTCTTT 13447491 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| || ||| | || | ||| || || ||| ||||| | ||| || Sbjct 13447490 GTCTTGGATCTTTGCCTTCACATTATCAATAGTATCGGAGCTTTCAACTTCCAAAGTAAT 13447431 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || ||||| || ||||| |||||||| Sbjct 13447430 GGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 13447395 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||||||| || || || ||||| || || || || || || | || | Sbjct 19970000 ACGCAACACCAAATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGCCAGAGTTCTGCC 19970059 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || |||||||| || || || | |||||||||||||| ||||| |||||||||||||| Sbjct 19970060 GTCCTCGAGTTGCTTTCCGGCGAAAATCAATCTTTGCTGGTCCGGAGGAATACCCTCTTT 19970119 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | ||| ||||| | || | ||||| || ||| ||||| | || || Sbjct 19970120 GTCCTGGATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAACTTCCAAGGTGAT 19970179 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || ||||| |||||||| Sbjct 19970180 GGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 19970215 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || || ||||| |||||||| || ||||| | || ||| Sbjct 33565527 ACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACC 33565468 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||||||||| || ||| | || | || ||||| ||||| || || || || || Sbjct 33565467 ATCTTCGAGTTGTTTTCCCGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTT 33565408 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| || | ||| ||| | || | || || || ||| || |||||||||| Sbjct 33565407 ATCTTG-AATCTTCGCTTTCACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTA 33565349 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || || || || |||||||||||||| Sbjct 33565348 TCGTCTTTCCCGTCAAAGTCTTGACAAATATCTGCAT 33565312 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| || || || || || ||||| || || |||| || ||| || Sbjct 19970232 AGGACAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCC 19970291 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||| || || ||| | ||||| || ||||||||||| ||||| ||||| |||||| Sbjct 19970292 TCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCT 19970351 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || || || | || | ||||||||| || || || || || ||||| Sbjct 19970352 TGGATCTTAGCCTTAACGTTATCAATGGTGTCAGAACTCTCAACCTCGAGGGTAATAGTC 19970411 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| ||||| ||||| || |||||||| Sbjct 19970412 TTACCAGTCAAGGTCTTAACGAAGATCTGCAT 19970443 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| ||||| || || || || || || || |||||||| | ||| || ||| Sbjct 19970460 AGAACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAATCCGCCAAGGTACGGCCATCT 19970519 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | || || ||||| | |||||||| ||||||||||| ||||| ||||| || ||| Sbjct 19970520 TCCAACTGCTTTCCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATTCCCTCCTTATCT 19970579 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || || || | || | ||||||||| ||| || || || || ||||| Sbjct 19970580 TGGATCTTAGCCTTAACGTTGTCGATCGTGTCAGAACTTTCCACCTCGAGGGTGATAGTC 19970639 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | ||||| ||||| |||||||| Sbjct 19970640 TTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 19970671 Score = 107 bits (118), Expect = 1e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || || ||||| |||||||| || ||||| | || ||| Sbjct 33830056 ACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACC 33830115 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||||||||| || ||| | || | || ||||| ||||| || || || || || Sbjct 33830116 ATCTTCGAGTTGTTTTCCCGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTT 33830175 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| || | ||| ||| | || | || || || ||| || |||||||||| Sbjct 33830176 ATCTTG-AATCTTCGCTTTCACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTA 33830234 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 | || || || ||| | || || ||||| Sbjct 33830235 TCGTCTTTCCCGTTTAAGTCTTGACAAA 33830262 >seq3 Length=27950219 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| ||||||||||| || || ||||| || |||||||||||||||||| Sbjct 14806201 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATCCGCA 14806142 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || |||||||| |||||| | || | ||| || | ||||| || Sbjct 14806141 AGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGAGGG 14806082 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| ||| || | ||| ||| | || | |||| || || || Sbjct 14806081 ATTCCTTCCTTGTCTTG-AATCTTAGCTTTAACATTGTCAATGGTGTATGAGCTCTCGAC 14806023 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || ||||| ||||| | || || |||||||||||||| Sbjct 14806022 TTCTAGGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCAT 14805975 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||||||||| ||||| || || || || || ||||| ||||| ||||| || Sbjct 5226822 CCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAGCC 5226881 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || || ||||| ||||| || ||| | || | ||||| || ||||| || Sbjct 5226882 AAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAGGG 5226941 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | || ||||| |||| || ||||| || ||| || Sbjct 5226942 ATTCCTTCTTTGTCTTGGATCTTGGCATTGACGTTTTCGACGGTGTCGGAGCTTTCGACC 5227001 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| || ||||| || | ||||| || || || ||||| Sbjct 5227002 TCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCAT 5227048 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || ||||| ||||| || || |||||||||| || ||| Sbjct 5226605 ACGAAGAACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCCGCAAGAGTACGACC 5226664 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| || ||| | || | ||| || || ||||| | || || ||||| Sbjct 5226665 ATCCTCTAGCTGTTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGAGATTCCTTCTTT 5226724 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | || |||||| | || | ||||| || ||| || || || ||||| Sbjct 5226725 ATCTTGGATCTTGGCTTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCGAGTGTTAT 5226784 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||||||| |||||| ||||| || ||||| Sbjct 5226785 GGTTTTGCCAGTTAGGGTTTTCACAAAGATTTGCAT 5226820 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || || ||||| ||||| || ||||| || | || ||| Sbjct 5226092 ACGGAGAACAAGGTGAAGTGTTGACTCTTTCTGAATATTGTAATCAGCTAAAGTCCGACC 5226151 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || || | || | || || || ||||| ||||| || ||||| Sbjct 5226152 ATCTTCTAGCTGCTTCCCGACAAAGATTAGCCTCTGTTGGTCCGGTGGAATCCCTTCTTT 5226211 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||||| ||| || || | || | || ||||| ||||| |||||||| || Sbjct 5226212 GTCTTGTATCTTTGCCTTCACGTTATCAATCGTATCAGAGCTCTCTACCTCAAGAGTAAT 5226271 Query 29751 AGTTTTGCCAGTTAAGGTTTT 29771 ||||| || || || | ||| Sbjct 5226272 GGTTTTCCCTGTCAAAGATTT 5226292 Score = 86.0 bits (94), Expect = 5e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 29586 AAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTT 29645 ||| || || ||||| |||||||| || ||||| | || ||| ||| ||||||||||| Sbjct 14806388 AAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCTTCGAGTTGTTT 14806329 Query 29646 GCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG 29705 || ||| | || | || ||||| ||||| || || || || || ||||| ||| || | Sbjct 14806328 TCCCGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTG-AATCTTCG 14806270 Query 29706 -TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| ||| | || | || || || ||| || |||||| |||| Sbjct 14806269 CTTTCACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAATTAT 14806224 >seq1 Length=25238555 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| || || || || |||||||||||||| |||||||| || ||| | ||||| || Sbjct 18011472 TCCTCCTCTTAATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGCTGTAATCAGC 18011413 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | || || | |||||| || ||| | ||||| | ||| || ||||| || Sbjct 18011412 GAGTGTTCTTCCGTCTTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGGTCCGGTGG 18011353 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || || |||||||| ||| || | ||| ||| | || | ||||| ||| ||| | Sbjct 18011352 AATTCCTTCCTTGTCTTG-AATCTTCGCTTTCACATTGTCAATTGTGTCTGAAGATTCAA 18011294 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 | || || ||||| || || || |||| |||||| ||||| |||||||||| Sbjct 18011293 CCTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTT 18011243 Score = 116 bits (128), Expect = 3e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | | || |||||||||||||| || ||||| |||||||| || ||||| Sbjct 21980171 TCCACCCCTAAGCCTCAAAACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAGTCCGC 21980230 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || ||| ||| || |||||||| |||||| | |||||||| || ||||| || || Sbjct 21980231 TAGTGTACGACCATCTTCAAGTTGTTTACCAGCAAAGATCAATCTCTGTTGATCTGGTGG 21980290 Query 29679 AATACCCTCTTTGTCTTGT 29697 || ||||||||||| ||| Sbjct 21980291 TATTCCCTCTTTGTCCTGT 21980309 >seq8 Length=40886855 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| || ||||| || || ||||| |||||||||| || | Sbjct 1188631 ACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCAAGAGTCCTTCC 1188690 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| || || || | || | ||| ||||||||||| ||||| || || || Sbjct 1188691 ATCTTCAAGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGGAATCCCTTCCTT 1188750 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | || ||| | |||| ||||| || || || ||||| || | Sbjct 1188751 GTCCTG-AATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACCTCAAGGGTAA 1188809 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| ||||| | ||| || || ||||||||||| Sbjct 1188810 TGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 1188846 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| || | || || ||||| ||||| || ||||| |||||||||| || | Sbjct 1189840 ACGCAAGACAAGGTGGAGTGTGGACTCTTTCTGGATGTTGTAATCCGCAAGAGTCCTTCC 1189899 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | || | ||||||||||||||| ||||| |||||||| Sbjct 1189900 ATCTTCAAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGAATTCCCTCTTT 1189959 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || |||||| | || | ||| || || ||| || |||||||| || Sbjct 1189960 GTCCTGGATCTTAGCCTTGACATTATCAATAGTATCGGAGCTTTCAACCTCAAGAGTAAT 1190019 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || ||||| || ||||| Sbjct 1190020 GGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 1190055 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| || || ||||| || | || || || || || || || || || ||| Sbjct 1190057 CCACCTCTCAATCGGAGAACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAGTCGGCA 1190116 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || ||||| || ||||| | || | ||||||||||||||| ||| Sbjct 1190117 AGAGTCCTTCCATCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGA 1190176 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || ||||| || | ||| || ||| | || | ||||||||| || || Sbjct 1190177 ATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACC 1190236 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || || ||||| | ||||| || ||||| ||||| Sbjct 1190237 TCGAGAGTTATGGTCTTTCCAGTAAGAGTTTTCACGAATATTTGCAT 1190283 >seq7 Length=29178675 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || |||||||| ||||||||||| || || ||||| || ||||| || |||||| | Sbjct 2571069 TCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCCCC 2571010 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||| ||| ||| ||||| ||||| |||||| | || | || || | || || || Sbjct 2571009 AAGGGTTCGACCATCCTCGAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCTGGAGG 2570950 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || ||||| | || ||||| || | |||| || || || Sbjct 2570949 GATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAAC 2570890 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| | || |||||||| ||||| | ||||| |||||||| |||||| Sbjct 2570889 TTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCATT 2570841 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| || || | || || || || || || || ||||| |||||||||| || ||| Sbjct 2570831 AAACGAAGGACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGAGTACGA 2570772 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| ||||||||||| ||||| | || | || || | ||||| || || || || Sbjct 2570771 CCATCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCCGGAGGGATCCCTTCC 2570712 Query 29689 TTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 || ||||| | || ||||| || | |||| || || ||||| | || Sbjct 2570711 TTATCTTGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACTTCTAAGGTA 2570652 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||||| ||||| | ||||| |||||||| |||||| Sbjct 2570651 ATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCATT 2570613 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| || || | || || || || || || || ||||| |||||||||| || ||| Sbjct 2570603 AAACGAAGAACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGTGTACGA 2570544 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| ||||||||||| ||||| | || | || || | ||||| || || || || Sbjct 2570543 CCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGTTCGTCCGGAGGGATCCCTTCC 2570484 Query 29689 TTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 || ||||| | || |||||| || | || || || ||| || || || ||| Sbjct 2570483 TTATCTTGGATCTTCGCCTTGACATCGTCAATGGTTTCTGAGCTTTCGACCTCGAGGGTT 2570424 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || | || |||||||| || ||||| Sbjct 2570423 ATGGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 2570386 >seq5 Length=22804910 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||||||| |||||||| || ||||| || || || | || || Sbjct 22133793 ACGAAGGACAAGATGAAGCGTTGATTCTTTCTGGATGTTGTAGTCAGCGAGAGTACGTCC 22133734 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||||||||| ||||| | || || | |||||| ||||| || || || || || Sbjct 22133733 GTCTTCGAGTTGTTTTCCAGCGAAGATTAAACGTTGCTGGTCCGGTGGGATTCCTTCCTT 22133674 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || ||||||| | || | || || || ||| || || ||||| || Sbjct 22133673 GTCTTGGATCTTGGCTTTGACATTGTCGATGGTATCTGATGATTCAACCTCGAGAGTGAT 22133614 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||| |||||| || || |||||||| Sbjct 22133613 TGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 22133578 >seq4 Length=23266485 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||||||| ||||| || || ||||| || || || | || || Sbjct 22703213 ACGAAGGACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCAGCCAGAGTACGTCC 22703272 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||||||||| || || | || |||| ||| |||||||| || || || || || Sbjct 22703273 GTCTTCGAGTTGTTTTCCGGCGAAGATTAATCGTTGTTGATCCGGTGGGATTCCTTCCTT 22703332 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || |||||| | || | || || || ||| || || ||||| || Sbjct 22703333 GTCTTGGATCTTGGCCTTGACATTGTCGATTGTATCGGATGATTCAACCTCGAGAGTGAT 22703392 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || |||| |||||| || || |||||||| || Sbjct 22703393 CGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCATCTT 22703431 Score = 105 bits (116), Expect = 5e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || || ||||| |||||||| || ||||| | || ||| Sbjct 5738678 ACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCTAAAGTCCGACC 5738619 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| || | | | || | || || || ||| | || || || || || Sbjct 5738618 ATCCTCTAGTTGTTTTCCGGTAAAGATTAGCCTCTGTTGGTCCAGAGGGATTCCTTCCTT 5738559 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | |||| | || | |||||| || || ||||| || || | Sbjct 5738558 GTCTTG-AATCTTCGCCTTGATGTTGTCAATAGTGTCTGAGCTCTCAACTTCTAGGGTAA 5738500 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||||| | || || |||||||||||||| Sbjct 5738499 TAGTTTTACCAGTAAGCGTCTTGACAAATATCTGCAT 5738463 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| || || | || || || || || ||||| ||||| || ||||||| || || Sbjct 5744960 AAACGAAGGACAAGGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCCGCAAGAGTACGG 5744901 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| ||||| ||||| || ||| | || | ||| | ||| ||||| || || || || Sbjct 5744900 CCATCCTCGAGCTGTTTACCCGCAAAGATAAGTCTCTTCTGTTCCGGAGGGATCCCTTCC 5744841 Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 |||||||| ||| || | ||| ||| | || | ||||| || || ||||| || || Sbjct 5744840 TTGTCTTG-AATCTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGT 5744782 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | || || |||||||||||||| Sbjct 5744781 AATGGTTTTATTGGTAAGCGTCTTGACAAATATCTGCAT 5744743 Score = 82.4 bits (90), Expect = 6e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 29639 GTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTA 29698 ||||||| || ||| | || ||||||||||| ||||| || || || ||||| ||||| | Sbjct 5748391 GTTGTTTACCGGCAAAGATTAATCTTTGCTGGTCCGGAGGGATCCCTTCTTTATCTTG-A 5748333 Query 29699 ATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 || || | ||| ||| | || | || || || || ||||| || || || ||||| Sbjct 5748332 ATCTTCGCTTTAACATTGTCAATGGTATCTGAGCTCTCAACTTCTAGGGTAATGGTTTTA 5748273 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | | || |||||||||||||| Sbjct 5748272 CCCGTAAGCGCCTTGACAAATATCTGCAT 5748244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385088819070711