Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 9e-11 >seq2 Length=28351830 Score = 82.4 bits (90), Expect = 9e-11 Identities = 112/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053 |||||| || | ||| | || || || |||||| || ||||| || || || || || Sbjct 16614035 CACGTGAGCGAGTATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAG 16613976 Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113 ||||| ||| | || | ||| |||| || || ||||||||||| || || || || || Sbjct 16613975 ACCCATATCCGCTGAACGCTGATACATTTGACATGAGAGCTCCCCTTCTGCAACATAGAA 16613916 Query 147114 CTG-GCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||| ||| | |||||||| || || || ||||| Sbjct 16613915 CTGTGCA-AACATGTGGCATGGAGGAAGTGCCAT 16613883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583285449434400