Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-12 >seq4 Length=23266485 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 ||||||||||| | || ||||||||| ||||| |||| ||| || || ||| | ||| Sbjct 12669084 GACAAAGAAGGTATACCACCTGATCAACAGAGGCTGATTTTTGCTGGTAAGCAACTTGAA 12669143 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| | ||| | | ||||||||||| || ||||| ||||| || ||| | || ||| Sbjct 12669144 GATGGTCGAACCTTAGCTGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTGTCTTG 12669203 Query 106473 AGGTTACGAGGAGGA 106487 ||| | |||| ||| Sbjct 12669204 AGGCTTAGAGGTGGA 12669218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402193427900768