Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6 136 4e-27 seq4 125 7e-24 seq5 116 4e-21 seq3 116 4e-21 seq7 107 2e-18 seq8 91.5 1e-13 >seq6 Length=37079636 Score = 136 bits (150), Expect = 4e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || |||||||| | ||| | || || |||||||| || |||||||| ||||| ||| | Sbjct 13447904 AGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCCAA-GGTACG 13447846 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || ||||| || || ||||| ||||| | |||||| || || || || ||||| Sbjct 13447845 ACCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGAATACCTTC 13447786 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||| || ||| || || ||| | ||||| || ||||| |||||||| Sbjct 13447785 CTTATCTTGGATCTTTGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCCACCTCGAGAGT 13447726 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||| ||||| || || || |||||||| |||||||| Sbjct 13447725 AATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| |||||||| ||||||| ||||| ||||| ||||| |||||||| ||| Sbjct 13448141 CCACCACGGAGACGCAACACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAGCC 13448082 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || || || ||||| || |||||||| || | ||||||||| || || || Sbjct 13448081 AAAG-TCCGACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGG 13448023 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || || || || || || ||| | |||||| || ||||| Sbjct 13448022 GATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCCAC 13447963 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || ||||| || || ||||||||||| ||||| Sbjct 13447962 CTCAAGAGTGATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || | ||| || || || ||||| ||||||||||||||| | | ||| || Sbjct 19969770 AGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCTAAGGTCCGA 19969829 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || |||||||| | ||||||||| || || || || |||||| Sbjct 19969830 CCATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGGATCCCTTCT 19969889 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||| || || || ||||| ||| Sbjct 19969890 TTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTCGACCTCGAGGGTA 19969949 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || || || || ||||| || ||||| Sbjct 19969950 ATGGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 19969987 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| || || || || || ||||| || || ||||| || ||| || || ||| || Sbjct 13447376 CACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGTACGACCGTCCTC 13447317 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||| || || || || ||||| | ||||||||| || || || ||||| || ||||| Sbjct 13447316 AAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCTTCCTTATCTTG 13447257 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 ||| || ||| || || | ||||| || || || ||||||||||| ||||| Sbjct 13447256 AATCTTAGCTTTCACGTTATCGATGGTGTCAGAACTCTCAACCTCGAGAGTAATAGTTTT 13447197 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || || || || || || ||||| Sbjct 13447196 ACCAGTCAAGGTCTTCACAAAGATCTGCAT 13447167 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || | || | ||| || || || ||||| || ||||||||||| ||| Sbjct 19969533 CCACCACGGAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 19969592 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| || || || |||||||| || || || || | ||||||||| || || || Sbjct 19969593 AA-AGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGG 19969651 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || || || ||||| ||| | |||||| || || || Sbjct 19969652 GATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATTGTGTCAGAGCTCTCGAC 19969711 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | ||| || |||||||| ||||| Sbjct 19969712 TTCAAGGGTGATGGTCTTTCCAGTAAGAGTCTTCACGAAAATCTGCAT 19969759 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | || ||||| || || || || || |||||||||||||| Sbjct 33565540 TTCCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCG 33565481 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | || || || ||||| ||||| || ||||| || | | |||||| || || | Sbjct 33565480 CTAATGTCCGACCATCTTCGAGTTGTTTTCCCGCAAAGATTAGCCTCTGCTGGTCCGGAG 33565421 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || |||||||| || ||| || ||| | ||| || || ||| | Sbjct 33565420 GGATCCCTTCCTTATCTTGAATCTTCGCTTTCACATTGTCAATTGTATCCGAGCTTTCGA 33565361 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || ||||| || || || || || ||||| || || || || ||||| Sbjct 33565360 CCTCAAGAGTTATCGTCTTTCCCGTCAAAGTCTTGACAAATATCTGCAT 33565312 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || ||||| || ||||||||||| ||| || || ||| || Sbjct 19970235 ACAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCCTCA 19970294 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || ||||| ||||| | ||||||||| || || || || || || ||||| Sbjct 19970295 AGTTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCTTGG 19970354 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | ||||| || || || ||||| ||||| || ||| Sbjct 19970355 ATCTTAGCCTTAACGTTATCAATGGTGTCAGAACTCTCAACCTCGAGGGTAATAGTCTTA 19970414 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || |||||||| || ||||| Sbjct 19970415 CCAGTCAAGGTCTTAACGAAGATCTGCAT 19970443 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| | | | || | ||| || || |||||||| || |||||||| || || Sbjct 33565082 CCTCCTCTCAACCTGAGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATCCGCA 33565023 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || |||||||| || || ||||| |||| | |||||| || || || Sbjct 33565022 AGAGTTCGACCATCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGG 33564963 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||||||||| ||| || ||| | ||||| || || || Sbjct 33564962 ATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCGACT 33564903 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| |||||||| || | || || || || || | ||| Sbjct 33564902 TCTAGGGTAATCGTTTTACCAGTAAGTGTCTTGACAAATATCTACAT 33564856 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | || ||||| || || || || || |||||||||||||| Sbjct 33830043 TTCCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCG 33830102 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | || || || ||||| ||||| || ||||| || | | |||||| || || | Sbjct 33830103 CTAATGTCCGACCATCTTCGAGTTGTTTTCCCGCAAAGATTAGCCTCTGCTGGTCCGGAG 33830162 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || |||||||| || ||| || ||| | ||| || || ||| | Sbjct 33830163 GGATCCCTTCCTTATCTTGAATCTTCGCTTTCACATTGTCAATTGTATCCGAGCTTTCGA 33830222 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 | || ||||| || || || || ||| |||| || || || Sbjct 33830223 CCTCAAGAGTTATCGTCTTTCCCGTTTAAGTCTTGACAAA 33830262 >seq4 Length=23266485 Score = 125 bits (138), Expect = 7e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || ||||| |||||||| || ||||||||||| | | || | ||| ||| Sbjct 22703220 ACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCAGCCAGAGTACGTCCGTCTTCG 22703279 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || || || || || || || ||||| || || || ||||| || ||||| Sbjct 22703280 AGTTGTTTTCCGGCGAAGATTAATCGTTGTTGATCCGGTGGGATTCCTTCCTTGTCTTGG 22703339 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||| ||||| ||||| || |||||||| || || || Sbjct 22703340 ATCTTGGCCTTGACATTGTCGATTGTATCGGATGATTCAACCTCGAGAGTGATCGTCTTC 22703399 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || |||| ||||| ||||| || ||||| || Sbjct 22703400 CCTGTTAGGGTTTTCACGAAGATCTGCATCTT 22703431 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||| || ||||||||||| ||| || | || |||||||| Sbjct 5744550 GTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCCGCAAGAGTACAACCATCTTCGAGCTG 5744491 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||| || | | || || || || || || |||||||| |||||||| || Sbjct 5744490 TTTACCCGCAAAGATTAGCCTTTGTTGGTCAGGAGGGATTCCTTCTTTATCTTGAATCTT 5744431 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | ||| || || || || || || |||||| ||||||| || Sbjct 5744430 CGCCTTGACGTTGTCAATTGTATCTGAACTCTCAACTTCTAGGGTAATGATTTTACCAGT 5744371 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || || |||||||| Sbjct 5744370 GAGTGTTTTCACAAAGATTTGCAT 5744347 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || |||||||| ||||||||||| ||| || | || ||| Sbjct 5744951 ACAAGGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCCGCAAGAGTACGGCCATCCTCG 5744892 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||| || ||||| || | | || ||| || || || || ||||| || |||||| Sbjct 5744891 AGCTGTTTACCCGCAAAGATAAGTCTCTTCTGTTCCGGAGGGATCCCTTCCTTGTCTTGA 5744832 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||| || ||| | ||||| || || || || || |||||||||||| Sbjct 5744831 ATCTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATGGTTTTA 5744772 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| | || || || || || ||||| Sbjct 5744771 TTGGTAAGCGTCTTGACAAATATCTGCAT 5744743 >seq5 Length=22804910 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || ||||| ||||| || || ||||||||||| | | || | ||| ||| Sbjct 22133786 ACAAGATGAAGCGTTGATTCTTTCTGGATGTTGTAGTCAGCGAGAGTACGTCCGTCTTCG 22133727 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || || || || ||||| ||||| || || || || ||||| || ||||| Sbjct 22133726 AGTTGTTTTCCAGCGAAGATTAAACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGG 22133667 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| ||| | || || || ||||| || |||||||| || || || Sbjct 22133666 ATCTTGGCTTTGACATTGTCGATGGTATCTGATGATTCAACCTCGAGAGTGATTGTCTTC 22133607 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||| ||||| ||||| || ||||| Sbjct 22133606 CCCGTTAGGGTTTTCACGAAGATCTGCAT 22133578 >seq3 Length=27950219 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | |||| || | ||| || || || |||||||| |||||||| || ||| Sbjct 5226822 CCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAGCC 5226881 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| ||||||||||| || ||||| || | | || || || || || Sbjct 5226882 AA-GGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAGG 5226940 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||| || || ||||| || | |||||||| ||| || Sbjct 5226941 GATTCCTTCTTTGTCTTGGATCTTGGCATTGACGTTTTCGACGGTGTCGGAGCTTTCGAC 5227000 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | |||||| ||||| |||||||| Sbjct 5227001 CTCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCAT 5227048 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || ||||||||||| || ||||| || ||| || || || || Sbjct 5226612 ACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCCGCAAGAGTACGACCATCCTCT 5226671 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||| || ||||| || | | ||| || || || | || |||||||| ||||| Sbjct 5226672 AGCTGTTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGAGATTCCTTCTTTATCTTGG 5226731 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| ||| | ||||| || ||| || ||||| || |||||||| Sbjct 5226732 ATCTTGGCTTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCGAGTGTTATGGTTTTG 5226791 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||| ||||| || || |||||||| Sbjct 5226792 CCAGTTAGGGTTTTCACAAAGATTTGCAT 5226820 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || | ||| | || || || |||||||| |||||||| || || || Sbjct 14806201 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATCCGCA 14806142 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || || ||||| || ||||| || | | ||| | || || || Sbjct 14806141 AGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGAGGG 14806082 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| || ||| || ||| | |||| || || || Sbjct 14806081 ATTCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATGGTGTATGAGCTCTCGACT 14806022 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || |||||||||||||| || | || || || || || ||||| Sbjct 14806021 TCTAGGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCAT 14805975 >seq7 Length=29178675 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| ||||| | || | ||| | || || || |||||||| ||||| ||||| || | Sbjct 2571070 TTCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCCC 2571011 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| ||| || || ||||||||||| || ||||| || | | ||| | || || | Sbjct 2571010 CAAGGGTTCGACCATCCTCGAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCTGGAG 2570951 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCC 134663 | || ||||| || ||||| || || ||||| ||| ||||| |||| || || Sbjct 2570950 GGATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGT-CAATGCTGTCTGAGCTCTCA 2570892 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | ||||| |||||||| || | ||||| || || ||||||||| Sbjct 2570891 ACTTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCATT 2570841 >seq8 Length=40886855 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || ||||| || ||||| || || || |||||||| || ||| || Sbjct 1189838 AGACGCAAGACAAGGTGGAGTGTGGACTCTTTCTGGATGTTGTAATCCGCAAGAGTCCTT 1189897 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || || || | | |||||||| || || || || ||| Sbjct 1189898 CCATCTTCAAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGAATTCCCTCT 1189957 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | || ||||| ||| || || |||||| Sbjct 1189958 TTGTCCTGGATCTTAGCCTTGACATTATCAATAGTATCGGAGCTTTCAACCTCAAGAGTA 1190017 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| ||||| || || || |||||||| Sbjct 1190018 ATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 1190055 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || |||||||| || |||||||| || ||| || || || || || Sbjct 1188644 TGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCAAGAGTCCTTCCATCTTCAAGTTGC 1188703 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || || || | | ||||||||| || || || ||||| || || ||||| || Sbjct 1188704 TTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGGAATCCCTTCCTTGTCCTGAATCTTA 1188763 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | |||||| || ||||| || || |||||||||||||| || Sbjct 1188764 GCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACCTCAAGGGTAATGGTTTTACCAGTG 1188823 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || ||||| Sbjct 1188824 AGGGTCTTCACGAATATCTGCAT 1188846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505222957262920