Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq6 156 3e-33 seq3 147 1e-30 seq7 116 2e-21 seq1 116 2e-21 seq8 111 1e-19 seq4 96.9 2e-15 >seq6 Length=37079636 Score = 156 bits (172), Expect = 3e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | ||||||||| || || ||||| |||||||||||||| | | Sbjct 33565310 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTCTGAATGTTATAATCCGCA 33565251 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | || ||||||||||| || ||||| || | | |||||||||||| || Sbjct 33565250 AGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGG 33565191 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||| || | || ||| | ||| |||||| |||||| || Sbjct 33565190 ATCCCTTCCTTGTCT-TGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAAC 33565132 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || |||||||| || | ||||||||||| |||||||| Sbjct 33565131 TTCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAAAGATCTGCAT 33565084 Score = 136 bits (150), Expect = 2e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||||||||| ||||| ||||| || || ||||| ||||| | | |||| Sbjct 13447612 AGACGCAACACCAAATGAAGAGTACTCTCTTTCTGGATGTTGTAATCAGCCAAAGTTCTG 13447553 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||||||||| || |||||||| || || || | ||| |||||||| || | ||||| Sbjct 13447552 CCGTCTTCAAGCTGCTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCCTCT 13447493 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| |||| || || || ||| || || ||| || ||||||| || Sbjct 13447492 TTGTCTTGGATC-TTTGCCTTCACATTATCAATAGTATCGGAGCTTTCAACTTCCAAAGT 13447434 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || || || ||||| |||||||| Sbjct 13447433 AATGGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 13447395 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| || ||||| || ||||| ||||| | ||| ||||| | || || Sbjct 33565064 ACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATCCGCAAGAGTTCGACCATCCTCG 33565005 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || ||||||||||| || | | ||| |||||||| || | ||| ||||||||| || Sbjct 33565004 AGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCT-TG 33564946 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||| | |||||| | ||| |||||| |||||| ||||| | ||| |||||||| Sbjct 33564945 AATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCGACTTCTAGGGTAATCGTTTT 33564886 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || | || || ||||| |||| ||| Sbjct 33564885 ACCAGTAAGTGTCTTGACAAATATCTACAT 33564856 Score = 122 bits (134), Expect = 5e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||||||||||||||| ||| || || || || || || | || |||| Sbjct 19969998 AGACGCAACACCAAATGGAGAGTAGACTCTTTCTGGATATTGTAGTCGGCCAGAGTTCTG 19970057 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || ||||| || ||||| || || || | || |||||||| || | ||||| Sbjct 19970058 CCGTCCTCGAGTTGCTTTCCGGCGAAAATCAATCTTTGCTGGTCCGGAGGAATACCCTCT 19970117 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | || ||| | ||| ||||| ||| || ||||||| ||| Sbjct 19970118 TTGTCCTGGAT-TTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAACTTCCAAGGT 19970176 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || |||||||| || || || ||||| |||||||| Sbjct 19970177 GATGGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 19970215 Score = 120 bits (132), Expect = 2e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| ||||| |||||| || ||||| || || | ||| || || |||| |||||||| Sbjct 19970240 ATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCCTCAAGTTG 19970299 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || |||||||| || || | ||| || ||||| || | ||||||||||||| |||| | Sbjct 19970300 CTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATTCCCTCCTTGTCTTGGATC-T 19970358 Query 34623 TTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | | |||||| || ||| ||||| ||||| || || | ||| || || ||||| | Sbjct 19970359 TAGCCTTAACGTTATCAATGGTGTCAGAACTCTCAACCTCGAGGGTAATAGTCTTACCAG 19970418 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | || || || || || |||||||| Sbjct 19970419 TCAAGGTCTTAACGAAGATCTGCAT 19970443 Score = 118 bits (130), Expect = 7e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||||| || | ||| |||||| ||||| || || || | | || || Sbjct 13448132 AGACGCAACACCAGGTGTAATGTGGACTCCTTCTGAATATTGTAGTCAGCCAAAGTCCGA 13448073 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || ||||| || | |||||| |||||||| || | ||||||| Sbjct 13448072 CCATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCC 13448013 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || || | |||||||||| ||||||||| || | || Sbjct 13448012 TTGTCCTGGATC-TTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCCACCTCAAGAGT 13447954 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || || ||||||||||| Sbjct 13447953 GATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 13447915 Score = 116 bits (128), Expect = 2e-21 Identities = 161/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG--AAAGTGTTC 34546 ||||| | ||||| |||||||| |||||| || ||||| || || | |||||| | Sbjct 19969542 AGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTG--C 19969599 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | | || ||||| |||||||| || || |||| |||||| |||||||| || | || | Sbjct 19969600 GACCATCCTCAAGCTGTTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGGATACCTT 19969659 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACG 34665 ||||||| |||||| | || || | ||||||||| |||||| ||||| | | Sbjct 19969660 CCTTGTCCTGGATCTTA-GCCTTGACATTGTCAATTGTGTCAGAGCTCTCGACTTCAAGG 19969718 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || | || ||||| ||||||||||| Sbjct 19969719 GTGATGGTCTTTCCAGTAAGAGTCTTCACGAAAATCTGCAT 19969759 Score = 113 bits (124), Expect = 3e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||| || ||| || |||||||| ||||| | ||||| || Sbjct 13448360 AGACGGAGGACCAAGTGGAGGGTCGACTCTTTCTGAATGTTGTAATCCGCCAGTGTACGA 13448301 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || ||||| || || |||| |||||| |||||||| || | || ||| Sbjct 13448300 CCATCCTCAAGCTGCTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGAATACCTTCC 13448241 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || |||||| | || ||| || ||| || || |||||| ||||| | || Sbjct 13448240 TTATCCTGGATCTTG-GCCTTCACGTTATCAATAGTATCAGAGCTCTCAACTTCAAGTGT 13448182 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | || ||||| ||||||||||| Sbjct 13448181 GATTGTCTTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 13448143 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||||||||| || | || ||||||||| || || || || | Sbjct 13447913 CCACCCCGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCC 13447854 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | || ||||| || || |||||||| || || | ||| |||||||| || Sbjct 13447853 AAGGTACGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGA 13447794 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||| ||| |||| |||| || ||| | ||| ||||| ||||||||| Sbjct 13447793 ATACCTTCCTTATCTTGGATC-TTTGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCCAC 13447735 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || ||||| || || || || || || || ||||| Sbjct 13447734 CTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||||||||| || ||||| ||||| || || || ||||| | Sbjct 13447165 CCACCACGAAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATATTGTAATCCGCC 13447106 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || ||| | ||||| | ||| ||||| || || || || | ||| || ||||| || Sbjct 13447105 AAGGTACGCCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGATCCGGAGGA 13447046 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||| || ||| || | |||||| | || || || || ||||| Sbjct 13447045 ATCCCTTCCTTATC-CTGAATCTTCGCTTTAACATTGTCGATCGTATCAGAACTTTCCAC 13446987 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || ||||| | ||||||||||| |||||||| Sbjct 13446986 CTCGAGAGTGATTGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 13446939 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || ||||| |||||| || || || ||||| | | || || | ||||| Sbjct 19970463 ACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAATCCGCCAAGGTACGGCCATCTTCC 19970522 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | || || || || || || || | ||| || ||||| || | ||||||||| ||| | Sbjct 19970523 AACTGCTTTCCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATTCCCTCCTTATCTTGG 19970582 Query 34618 ATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| | |||||| | || ||||| || ||||| || | ||| || || || Sbjct 19970583 ATCTTA-GCCTTAACGTTGTCGATCGTGTCAGAACTTTCCACCTCGAGGGTGATAGTCTT 19970641 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | ||||||||||| |||||||| Sbjct 19970642 TCCGGTGAGAGTTTTCACAAAGATCTGCAT 19970671 >seq3 Length=27950219 Score = 147 bits (162), Expect = 1e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | ||||||||| || || ||||| |||||||||||||| | | Sbjct 14806201 CCACCTCTCAGACGTAGCACCAAATGCAGGGTTGATTCCTTATGAATGTTATAATCCGCA 14806142 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | || ||||||||||| || ||||| || | | ||||| |||||| || Sbjct 14806141 AGCGTTCGACCATCCTCAAGTTGTTTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGAGGG 14806082 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||| ||||||||| ||| || | |||||| | ||| |||| | |||||| || Sbjct 14806081 ATTCCTTCCTTGTCT-TGAATCTTAGCTTTAACATTGTCAATGGTGTATGAGCTCTCGAC 14806023 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || |||||||| || | || || ||||| |||||||| Sbjct 14806022 TTCTAGGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCAT 14805975 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||| | ||| | |||||| || |||||| || |||||||| || | Sbjct 16879381 CCACCTCCGAGACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTATAGTCAGCG 16879322 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | | |||||||| || |||||||| ||||| | | ||| | |||||| || Sbjct 16879321 AGTGTCCTTCCATCTTCAAGCTGCTTACCGGCGAATATGAGTCTCTGCTCGTCCGGTGGG 16879262 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| |||||| | || ||| | ||| ||||| ||| || || Sbjct 16879261 ATTCATTCCTTGTCCTGGATCTTA-GCCTTGACGTTGTCAATAGTGTCGAAGCTTTCAAC 16879203 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || || || || | || || ||||||||||||||||| Sbjct 16879202 TTCGAGGGTAATGGTCTTGCCTATCAAAGTCTTCACAAAAATCTGCAT 16879155 Score = 109 bits (120), Expect = 3e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 |||||||| || || ||||| | ||| || || | || || || |||||||||||||| Sbjct 5226630 TCCTTTTGGATATTGTAATCCGCAAGAGTACGACCATCCTCTAGCTGTTTACCGGCAAAG 5226689 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | |||||||||||| | | ||| || || ||| |||| || | ||| ||| | Sbjct 5226690 ATAAGTCTCTGTTGGTCCGGAGAGATTCCTTCTTTATCTTGGATC-TTGGCTTTGACGTT 5226748 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 ||| |||||| ||| || || || | ||||| ||||| || |||| |||||||| Sbjct 5226749 GTCAATGGTGTCTGAGCTTTCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGGTTTTCAC 5226808 Query 34695 AAAAATCTGCAT 34706 ||| || ||||| Sbjct 5226809 AAAGATTTGCAT 5226820 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||||| ||||| |||||||| ||||||||| ||||| ||||| | Sbjct 5226822 CCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAGCC 5226881 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || |||| || || |||||||||||||| || | | ||||||||||| || Sbjct 5226882 AAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAGGG 5226941 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||| || |||||| |||| || | || ||| | | ||||| ||| || || Sbjct 5226942 ATTCCTTCTTTGTCTTGGATC-TTGGCATTGACGTTTTCGACGGTGTCGGAGCTTTCGAC 5227000 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||||| || || || || | |||||||| || || ||||| Sbjct 5227001 CTCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCAT 5227048 >seq7 Length=29178675 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | ||||||||| ||||| ||||| ||||| || ||||| | Sbjct 2571068 CCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCCCCA 2571009 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | || || || |||||||| ||||| || | | ||||| ||| || || Sbjct 2571008 AGGGTTCGACCATCCTCGAGCTGTTTACCAGCAAAGATGAGCCTCTGTTCGTCTGGAGGG 2570949 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTG-TGTCTTCGCTCTCCAC 34658 | || ||||| ||| |||||| | || ||| | || ||||| |||||| || Sbjct 2570948 ATCCCTTCCTTATCTTGGATCTTC-GCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAAC 2570890 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || |||||||| || | ||||||||||| || ||||| Sbjct 2570889 TTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAAATATTTGCAT 2570842 Score = 104 bits (114), Expect = 1e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || ||||| |||||| || ||||| ||||| | ||| || || | || || |||||| Sbjct 2570816 TGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGAGTACGACCATCCTCGAGTTGT 2570757 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || | | ||||| |||||| || | || ||||| ||| |||| || Sbjct 2570756 TTACCAGCGAAGATGAGCCTCTGTTCGTCCGGAGGGATCCCTTCCTTATCTTGGATC-TT 2570698 Query 34624 TGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| ||| ||||| |||||| ||||| | ||| || |||||||| || Sbjct 2570697 CGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACTTCTAAGGTAATAGTTTTACCAGT 2570638 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | ||||||||||| || ||||| Sbjct 2570637 GAGTGTTTTCACAAATATTTGCAT 2570614 Score = 86.0 bits (94), Expect = 4e-12 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || ||||| |||||| || ||||| ||||| | |||||| || | || || |||||| Sbjct 2570588 TGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGTGTACGACCATCCTCGAGTTGT 2570529 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || | | ||||| |||||| || | || ||||| ||| |||| || Sbjct 2570528 TTACCAGCGAAGATAAGCCTCTGTTCGTCCGGAGGGATCCCTTCCTTATCTTGGATC-TT 2570470 Query 34624 TGTTTTAACGAT--AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | || || || ||| || ||| ||| || || || | |||||| || || || | Sbjct 2570469 CGCCTTGAC-ATCGTCAATGGTTTCTGAGCTTTCGACCTCGAGGGTTATGGTCTTGCCTG 2570411 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | | || || ||||| || ||||| Sbjct 2570410 TAAGAGTCTTAACAAAGATTTGCAT 2570386 >seq1 Length=25238555 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | || | |||||||| || || || || || ||| | ||||| | Sbjct 18011471 CCTCCTCTTAATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGCTGTAATCAGCG 18011412 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||||| ||||||| | |||||| || ||||| || ||||| ||||||||||| || Sbjct 18011411 AGTGTTCTTCCGTCTTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGGTCCGGTGGA 18011352 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||| ||||||||| ||| || | ||| || | |||||||||| || || Sbjct 18011351 ATTCCTTCCTTGTCT-TGAATCTTCGCTTTCACATTGTCAATTGTGTCTGAAGATTCAAC 18011293 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | |||||| || || || |||| ||||||||||| |||||||| Sbjct 18011292 CTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 18011245 Score = 98.7 bits (108), Expect = 6e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || ||||| | ||| |||||||| || || ||| || |||||||| || || | Sbjct 21980172 CCACCCCTAAGCCTCAAAACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAGTCCGCT 21980231 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | ||||||||||||||||| ||||| || || | |||||| || || || Sbjct 21980232 AGTGTACGACCATCTTCAAGTTGTTTACCAGCAAAGATCAATCTCTGTTGATCTGGTGGT 21980291 Query 34600 ACTCCCTCCTTGTC 34613 | |||||| ||||| Sbjct 21980292 ATTCCCTCTTTGTC 21980305 >seq8 Length=40886855 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||||| ||||| ||||| || ||||| ||||| | | Sbjct 1188620 CCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCA 1188679 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || | | ||||||||||| |||||||| || || | | ||| || ||||| || Sbjct 1188680 AGAGTCCTTCCATCTTCAAGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGGA 1188739 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| || | || || | ||||||||| ||||||||| Sbjct 1188740 ATCCCTTCCTTGTC-CTGAATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCAC 1188798 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || |||||||| || | || ||||| || |||||||| Sbjct 1188799 CTCAAGGGTAATGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 1188846 Score = 86.0 bits (94), Expect = 4e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611 || || || || ||||||||||| || | | ||| || ||||| || | ||| |||||| Sbjct 1189673 TCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGGATTCCTTCCTTG 1189732 Query 34612 TCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670 || ||| || | || ||| || ||| |||||| ||||||||| |||| || || Sbjct 1189733 TC-CTGAATCTTAGCCTTGACGTTATCAATAGTGTCTGAGCTCTCCACCTCCAAAGTGAT 1189791 Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| || | || |||||||| |||||||| Sbjct 1189792 AGTCTTACCAGTAAGGGTCTTCACAAAGATCTGCAT 1189827 >seq4 Length=23266485 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| || ||||| || ||||| || || | ||| || | | ||||| Sbjct 5744555 ACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCCGCAAGAGTACAACCATCTTCG 5744496 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || |||||||| ||||| |||| | |||||||| || || | ||| || || ||| Sbjct 5744495 AGCTGTTTACCCGCAAAGATTAGCCTTTGTTGGTCAGGAGGGATTCCTTCTTTATCTTGA 5744436 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| | || ||| | |||||| ||| ||||| ||||| | ||| || |||| Sbjct 5744435 ATCTTC-GCCTTGACGTTGTCAATTGTATCTGAACTCTCAACTTCTAGGGTAATGATTTT 5744377 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || | ||||||||||| || ||||| Sbjct 5744376 ACCAGTGAGTGTTTTCACAAAGATTTGCAT 5744347 Score = 89.7 bits (98), Expect = 3e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 ||| |||||||||||||||| ||||| | || |||||||| || | || || || ||| Sbjct 5748395 TCATGTTGTTTACCGGCAAAGATTAATCTTTGCTGGTCCGGAGGGATCCCTTCTTTATCT 5748336 Query 34615 GTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| || | |||||| | ||| || ||| |||||| ||||| | ||| || || Sbjct 5748335 -TGAATCTTCGCTTTAACATTGTCAATGGTATCTGAGCTCTCAACTTCTAGGGTAATGGT 5748277 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || | || || ||||| |||||||| Sbjct 5748276 TTTACCCGTAAGCGCCTTGACAAATATCTGCAT 5748244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314623076914643