Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq3 118 9e-22 seq1 118 9e-22 seq8 113 4e-20 seq7 98.7 9e-16 seq4 95.1 1e-14 >seq6 Length=37079636 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| ||||| ||| | || ||||| || |||||| || Sbjct 13446939 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACAATCACTCTCGAGGTGGAAAGTTCT 13446998 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || ||| || ||||| || || ||||| || || || ||||| Sbjct 13446999 GATACGATCGACAATGTTAAAGCGAAGATTCAGGATAAGGAAGGGATTCCTCCGGATCAG 13447058 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || ||||||||||| | ||| | | |||||||| Sbjct 13447059 CAGAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGGCGTACCTTGGCGGATTACAAT 13447118 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | || ||||| |||||| | || ||||| || Sbjct 13447119 ATCCAGAAGGAATCAACTCTTCACTTGGTGTTGCGTCTTCGTGGTGGTAT 13447168 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || || ||||||| || ||||| || || Sbjct 33565084 ATGCAGATCTTTGTGAAAACCCTCACTGGTAAAACTATTACCCTAGAAGTTGAGAGCTCA 33565143 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||||||||| ||||| || || || || ||| Sbjct 33565144 GACACCATTGACAACGTCAAGGCGAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAA 33565203 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCG-TTTCCGATTACAA 27166 ||| | | || | || || |||||| | || || | |||| || || | ||||| || Sbjct 33565204 CAGAGACTCATCTTTGCTGGAAAACAACTTGAGGA-TGGTCGAACGCTTGCGGATTATAA 33565262 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||| || ||| | |||||||| | ||| || | ||||| || Sbjct 33565263 CATTCAGAAGGAATCAACCCTGCATTTGGTGCTACGTCTGAGAGGTGGGAT 33565313 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| | ||||| || || || || || Sbjct 19969987 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTCGAGAGCTCA 19969928 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||||||||| || || || || || Sbjct 19969927 GACACTATTGACAACGTCAAGGCCAAGATCCAGGACAAAGAAGGGATCCCTCCGGACCAG 19969868 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || | || || || |||| | |||| |||||| Sbjct 19969867 CAGCGTCTCATTTTTGCTGGAAAGCAGCTTGAGGATGGTCGGACCTTAGCCGACTACAAC 19969808 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||||||| | || ||||| |||||| | || ||||| || Sbjct 19969807 ATTCAGAAGGAGTCGACCCTTCACTTGGTCTTGCGTCTTCGTGGTGGTAT 19969758 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| |||||| | |||||| | ||||| ||| ||| Sbjct 13447395 ATGCAGATCTTTGTCAAGACCTTGACGGGCAAGACCATTACTTTGGAAGTTGAAAGCTCC 13447454 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || ||| || ||||||||||| || || || || || || Sbjct 13447455 GATACTATTGATAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 13447514 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || || | |||||| | || | | ||||||||| Sbjct 13447515 CAGAGATTGATCTTCGCCGGTAAGCAGCTTGAAGACGGCAGAACTTTGGCTGATTACAAC 13447574 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||| || | |||||||| |||||| | || ||||| || Sbjct 13447575 ATCCAGAAAGAGAGTACTCTTCATTTGGTGTTGCGTCTACGTGGTGGTAT 13447624 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| ||||| ||| |||| || || || |||||| || Sbjct 19970671 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGTTCT 19970612 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || ||||| || || || || || || ||||| Sbjct 19970611 GACACGATCGACAACGTTAAGGCTAAGATCCAAGATAAGGAGGGAATTCCTCCGGATCAG 19970552 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || || |||||||| | ||| | | |||||||| Sbjct 19970551 CAGAGATTGATCTTCGCTGGAAAGCAGTTGGAAGATGGCCGTACCTTGGCGGATTACAAT 19970492 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || ||||||||||| | || |||||| Sbjct 19970491 ATCCAGAAGGAGTCGACTCTTCACTTGGTT 19970462 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||| || ||| | |||||||| || ||||| || Sbjct 13447687 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACTCTCGAGGTGGAGAGCTCT 13447746 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||| || ||||| || ||||| || ||||| || || Sbjct 13447747 GACACTATTGACAACGTGAAGGCAAAGATCCAAGATAAGGAAGGTATTCCACCGGACCAG 13447806 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||| || || | || || || ||| | | || ||||| Sbjct 13447807 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGTACCTTGGCTGACTACAAT 13447866 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || || || ||||| |||||| | |||||||| || Sbjct 13447867 ATCCAAAAGGAGTCTACATTGCACTTGGTGTTGCGTCTTCGGGGTGGTAT 13447916 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||||||| | || || |||||||| || || Sbjct 13448143 ATGCAGATTTTCGTGAAGACTCTTACCGGCAAGACAATCACACTTGAAGTTGAGAGCTCT 13448202 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || || || || || ||||| || ||||| || || Sbjct 13448203 GATACTATTGATAACGTGAAGGCCAAGATCCAGGATAAGGAAGGTATTCCACCGGACCAG 13448262 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| |||| | ||| || || || | || || || || | | ||||||||| Sbjct 13448263 CAGCGTCTAATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGTACACTGGCGGATTACAAC 13448322 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || ||||||||| | || ||||| | ||| | || ||||| Sbjct 13448323 ATTCAGAAAGAGTCGACCCTCCACTTGGTCCTCCGTCTCCGTGGTGG 13448369 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || ||| |||| || ||| | || |||||||| || ||| || Sbjct 33565312 ATGCAGATATTTGTCAAGACTTTGACGGGAAAGACGATAACTCTTGAGGTCGAAAGCTCG 33565371 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| || |||||||| || ||||| || || || || || Sbjct 33565372 GATACAATTGACAATGTGAAAGCGAAGATTCAAGATAAGGAAGGGATCCCTCCGGACCAG 33565431 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | |||| | || || |||||| | ||||| || ||| | | || |||||| Sbjct 33565432 CAGAGGCTAATCTTTGCGGGAAAACAACTCGAAGATGGTCGGACATTAGCGGACTACAAC 33565491 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || ||||| || | || | ||| | ||| | || ||||| Sbjct 33565492 ATTCAGAAAGAGTCAACTCTTCACCTTGTTCTCCGTCTCCGTGGTGG 33565538 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| |||||||||| || || || || || || | ||||| || ||||| || || Sbjct 33564856 ATGTAGATATTTGTCAAGACACTTACTGGTAAAACGATTACCCTAGAAGTCGAGAGCTCA 33564915 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||||||||||| ||||| || || || || || Sbjct 33564916 GACACCATTGACAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCGGACCAG 33564975 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || | || || || || || | ||||||||| Sbjct 33564976 CAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGAACTCTTGCGGATTACAAC 33565035 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || ||||| || ||| | || ||||| Sbjct 33565036 ATCCAGAAGGAATCAACCCTCCACTTGGT 33565064 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| || ||| || || ||| | || |||||||| || ||| || || | ||| Sbjct 33830262 TTTGTCAAGACTTAAACGGGAAAGACGATAACTCTTGAGGTCGAAAGCTCGGATACAATT 33830203 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | || ||| || |||||||| || ||||| || || || || || ||| | || Sbjct 33830202 GACAATGTGAAAGCGAAGATTCAAGATAAGGAAGGGATCCCTCCGGACCAGCAGAGGCTA 33830143 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || |||||| | ||||| || ||| | | || ||||||||||| || Sbjct 33830142 ATCTTTGCGGGAAAACAACTCGAAGATGGTCGGACATTAGCGGACTACAACATTCAGAAA 33830083 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || | || | ||| | ||| | || ||||| Sbjct 33830082 GAGTCAACTCTTCACCTTGTTCTCCGTCTCCGTGGTGG 33830045 >seq3 Length=27950219 Score = 118 bits (130), Expect = 9e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 || ||||| || || || |||||||| || |||||| | || || ||||| || ||| Sbjct 5227051 GCGATGCAAATCTTCGTGAAAACTCTTACGGGCAAGACCATAACACTTGAGGTCGAAAGC 5226992 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 |||||| | | || | ||||| || || |||||||||||||| || || || || Sbjct 5226991 TCCGACACCGTCGAAAACGTCAATGCCAAGATCCAAGACAAAGAAGGAATCCCTCCGGAC 5226932 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 ||||| | | || | ||||| ||||| | || ||| | ||| | | |||||| Sbjct 5226931 CAACAAAGGCTTATCTTTGCCGGTAAACAGCTCGAGGACGGCCGTACCTTGGCTGATTAC 5226872 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| || | || |||||| |||||||| | || || || Sbjct 5226871 AACATCCAAAAGGAGTCAACTCTCCACTTGGTTCTGCGTTTGAGAGGAGGTAT 5226819 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || || || || || | ||||| || ||||| || || Sbjct 14805975 ATGCAGATATTTGTCAAGACACTTACTGGTAAAACCATTACCCTAGAAGTCGAGAGCTCA 14806034 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| || ||||||||||| ||||| || || || || || Sbjct 14806035 TACACCATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATCCCTCCGGACTAA 14806094 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCG-TTTCCGATTACAA 27166 ||| | | || | || || |||||| | || || | |||| || || | ||||| || Sbjct 14806095 CAGAGACTCATCTTTGCTGGAAAACAACTTGAGGA-TGGTCGAACGCTTGCGGATTATAA 14806153 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||| || ||| | |||||||| | ||| || | ||||| || Sbjct 14806154 CATTCATAAGGAATCAACCCTGCATTTGGTGCTACGTCTGAGAGGTGGGAT 14806204 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27003 AAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATG 27062 ||| || |||| || || | ||||||||||| || || || || ||||||| | Sbjct 5226292 AAATCTTTGACAGGGAAAACCATTACTCTTGAGGTAGAGAGCTCTGATACGATTGATAAC 5226233 Query 27063 GTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATAC 27122 || || ||| || |||||||||||||| || ||||| || |||||| | |||| | Sbjct 5226232 GTGAAGGCAAAGATACAAGACAAAGAAGGGATTCCACCGGACCAACAGAGGCTAATCTTT 5226173 Query 27123 GCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCG 27182 | ||| || || | ||||| || ||| | | |||||||| ||||| || ||||| Sbjct 5226172 GTCGGGAAGCAGCTAGAAGATGGTCGGACTTTAGCTGATTACAATATTCAGAAAGAGTCA 5226113 Query 27183 ACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || | || | ||| | ||| | || ||||| Sbjct 5226112 ACACTTCACCTTGTTCTCCGTCTCCGTGGTGG 5226081 >seq1 Length=25238555 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || ||| | || || || || || ||| | || Sbjct 18011245 ATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTCA 18011304 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || ||||||||||| ||||| || ||||| || ||| Sbjct 18011305 GACACAATTGACAATGTGAAAGCGAAGATTCAAGACAAGGAAGGAATTCCACCGGACCAA 18011364 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | || || |||||||| |||||| | || | | ||||||| | Sbjct 18011365 CAACGTTTGATCTTTGCAGGAAAACAATTAGAAGACGGAAGAACACTCGCTGATTACAGC 18011424 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTT 27205 || || || || || || | ||||||||| | || || Sbjct 18011425 ATCCAGAAAGAATCAACGCTTCATTTGGTTCTACGATT 18011462 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 27078 CAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTG 27137 || |||||||| || |||||||| ||||||||| | || || | || || |||||| | Sbjct 21980308 CAGGACAAAGAGGGAATACCACCAGATCAACAGAGATTGATCTTTGCTGGTAAACAACTT 21980249 Query 27138 GAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||| || || | | || ||||||||||| || |||||||| | ||||||||| Sbjct 21980248 GAAGATGGTCGTACACTAGCGGACTACAACATTCAGAAAGAGTCGACGCTTCATTTGGTT 21980189 Query 27198 TTGCGTTTGCGGGGTGG 27214 ||| | | ||||||| Sbjct 21980188 TTGAGGCTTAGGGGTGG 21980172 >seq8 Length=40886855 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || || || || || | ||||| ||||| ||||| || Sbjct 1188846 ATGCAGATATTCGTGAAGACCCTCACTGGTAAAACCATTACCCTTGAGGTGGAGAGCTCA 1188787 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| ||||| || || || ||||| Sbjct 1188786 GACACAATAGACAATGTGAAGGCTAAGATTCAGGACAAGGAAGGGATTCCTCCGGATCAG 1188727 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| || ||| | ||||| | ||| || | ||||||||| Sbjct 1188726 CAGAGACTTATCTTCGCCGGTAAGCAACTTGAAGATGGAAGGACTCTTGCGGATTACAAC 1188667 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||| ||||| | ||||||||| | ||| | || ||||| Sbjct 1188666 ATCCAGAAGGAATCGACTCTTCATTTGGTTCTTCGTCTTCGTGGTGG 1188620 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| || |||||||| || || ||| | || ||||| || || || || Sbjct 1190283 ATGCAAATATTCGTGAAAACTCTTACTGGAAAGACCATAACTCTCGAGGTCGAGAGCTCT 1190224 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| || || ||||| ||||| || || || ||||| Sbjct 1190223 GACACTATCGATAATGTTAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAG 1190164 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || || ||| | ||||| | ||| || |||| ||||| Sbjct 1190163 CAAAGACTTATCTTCGCTGGTAAGCAACTTGAAGATGGAAGGACTCTTGCCGACTACAAT 1190104 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||||| || |||||| | || ||| | ||||| || Sbjct 1190103 ATCCAGAAGGAGTCGACCTTGCACTTGGTTCTCCGATTGAGAGGTGGTAT 1190054 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||| ||||||| ||| | ||||||||||| || ||| ||| Sbjct 1190055 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTTGAGGTTGAAAGCTCC 1189996 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || || || |||||||| || || || || ||||| Sbjct 1189995 GATACTATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAGGGAATTCCTCCGGATCAG 1189936 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || || || | ||||| | ||| || | ||||||||| Sbjct 1189935 CAAAGACTTATCTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCGGATTACAAC 1189876 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || | || |||||| | || ||||| || Sbjct 1189875 ATCCAGAAAGAGTCCACACTCCACCTTGTCTTGCGTCTTCGTGGTGGTAT 1189826 >seq7 Length=29178675 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || |||||| | || || || || || ||| || Sbjct 2570386 ATGCAAATCTTTGTTAAGACTCTTACAGGCAAGACCATAACCCTCGAGGTCGAAAGCTCA 2570445 Query 27048 GACTCGATTGA-GATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| |||| |||| || || ||||| || ||||| || || || || | Sbjct 2570446 GAAACCATTGACGATG-TCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCGGACGA 2570504 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||| | | || | ||| || |||||| | || || || || || | |||||||| Sbjct 2570505 ACAGAGGCTTATCTTCGCTGGTAAACAACTCGAGGATGGTCGTACACTTGCGGATTACAA 2570564 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || |||| | ||| | ||||| || ||||| || Sbjct 2570565 CATCCAGAAGGAGTCAACTCTACACCTTGTTCTTCGTTTACGCGGTGGAAT 2570615 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| ||||| || || || || ||||||| | ||||| || || Sbjct 2570614 ATGCAAATATTTGTGAAAACACTCACTGGTAAAACTATTACCTTAGAAGTTGAGAGCTCA 2570673 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||| ||||| || || ||||| || ||||| || || || || || Sbjct 2570674 GACAGCATTGACGACGTCAAGGCGAAGATCCAAGATAAGGAAGGGATCCCTCCGGACGAA 2570733 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || |||||| | || || || || || | ||||||||| Sbjct 2570734 CAGAGGCTCATCTTCGCTGGTAAACAACTCGAGGATGGTCGTACTCTTGCGGATTACAAC 2570793 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || |||| | || | ||||| || ||||| || Sbjct 2570794 ATCCAGAAGGAGTCAACTCTACACCTTGTCCTTCGTTTACGCGGTGGAAT 2570843 >seq4 Length=23266485 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || || || || || ||||||| || ||||| || || Sbjct 5738463 ATGCAGATATTTGTCAAGACGCTTACTGGTAAAACTATTACCCTAGAAGTTGAGAGCTCA 5738522 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||| || ||||||||||| ||||| || || | || ||| Sbjct 5738523 GACACTATTGACAACATCAAGGCGAAGATTCAAGACAAGGAAGGAATCCCTCTGGACCAA 5738582 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | |||| | |||| |||||| | || || || ||| | | || |||||| Sbjct 5738583 CAGAGGCTAATCTTTACCGGAAAACAACTAGAGGATGGTCGGACTTTAGCGGACTACAAC 5738642 Query 27168 ATTCAAAAGGAGTCGAC 27184 ||||| || ||||| || Sbjct 5738643 ATTCAGAAAGAGTCAAC 5738659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434767423513920