Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq3 1056 0.0 seq20831 408 5e-109 seq7 174 2e-38 seq2 127 3e-24 seq6 95.1 2e-14 >seq3 Length=27950219 Score = 1056 bits (1170), Expect = 0.0 Identities = 2226/3295 (68%), Gaps = 150/3295 (5%) Strand=Plus/Minus Query 183587 GATTTCCTCACCTTTAAAGGTGGTTTGAATCCTGTAACTGGCAGTCTTTGGATGACAGAT 183646 || || || || ||| || || || |||| || ||||| |||| ||| | || ||| Sbjct 27475356 GAATTTCTTACTTTTCGTGGCGGATTAGATCCAGTGACTGGGGGTCTATGGTTAACCGAT 27475297 Query 183647 ATAGCACATCATCACCTAGCAATAGCAGTTATGTTTATCATTGCAGGTCATATGTATCGC 183706 |||||||||||||| |||| || ||| || | || | || || |||||||||||| | Sbjct 27475296 ATAGCACATCATCATTTAGCTATCGCAATTCTTTTCCTAATAGCGGGTCATATGTATAGG 27475237 Query 183707 ACAAACTGGGGTATTGGTCAATCAATGAAAGAGATATTAGATGGTCAGAATGGTTTCCCA 183766 || ||||||||||||||||| | ||||| || || || | ||| || || |||| Sbjct 27475236 ACCAACTGGGGTATTGGTCATGGTCTAAAAGATATTTTGGAGGCTCATAAAGG---CCCA 27475180 Query 183767 ----CAGGGTGTCACACACAGAGGATTATATGAATTTCTAGCAGAATCAAGACATGCACA 183822 |||| | || | ||| |||||||| ||||| || |||| | ||||| || Sbjct 27475179 TTTACAGGCCAAGGC-CATAAAGGCCTATATGAAATTCTAACAACATCATGGCATGCTCA 27475121 Query 183823 ACTATCACTGAATCTGGCAATGCTAGGATCTATCAGTATCATAGTTTCACATCATATGTA 183882 | |||| || || ||||| ||| |||| ||| | | || | || | || |||||||| Sbjct 27475120 ATTATCTCTTAACCTGGCTATGTTAGGCTCTTTAACCATTGTTGTAGCTCACCATATGTA 27475061 Query 183883 TGCAATGCCACCTTATCCATATCTTGGTATTGAATATCCAACAGTAGTAGGATTATTCAC 183942 | | ||||| |||||||||||||| | || ||| ||| | || | | ||| ||||| Sbjct 27475060 TTCCATGCCCCCTTATCCATATCTAGCTACTGACTATGCTACCCAACTGTCATTGTTCAC 27475001 Query 183943 CCATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCTTCAATTGC 184002 ||||| |||||||| ||||| ||||| || || ||||| | || ||||| | ||| Sbjct 27475000 ACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTT 27474941 Query 184003 TATGATAAGAGACTATAATCCTGTTCAAC-ATATGGGAA--ATGTATTAGATAGAATACT 184059 |||| ||||||||||| |||| | | | |||| || || |||||||| | | || Sbjct 27474940 TATGGTAAGAGACTATGATCCAACTAATCGATAT---AACGATTTATTAGATCGTGTTCT 27474884 Query 184060 TAAATCTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTAGGTTTTCA 184119 | | | ||||||||||| || | ||||||||||| || ||| |||| || || Sbjct 27474883 GAGGCATCGCGATGCAATCATATCACATCTCAACTGGGTATGTATATTTCTAGGCTTCCA 27474824 Query 184120 TAGTTTTGGTCTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACCTAATGATCT 184179 ||||||||| | |||||||| ||||||| ||||| || || || | || | ||| | Sbjct 27474823 CAGTTTTGGTTTGTATATTCATAATGATACCATGAGTGCTTTAGGGCGTCCACAAGATAT 27474764 Query 184180 ATTCAGTGATACAGCAATACAATTACAACCTGTATTTGCACAGTCTGTTCAGAGATTACA 184239 || ||||| || |||||||||||||| || ||||| || | | || | || Sbjct 27474763 GTTTTCAGATACTGCTATACAATTACAACCAGTCTTTGCTCAATGGATACAAAATACCCA 27474704 Query 184240 TGCTTCATTATATAATGT------CTCTGATGTA--------------TTT--------- 184270 ||||| | | | ||| | ||| || | ||| Sbjct 27474703 TGCTTTAGCACCTGGTGTAACAGCCCCTGGTGAAACAGCGAGCACCAGTTTAACTTGGGG 27474644 Query 184271 ----GGTGGATCAACCACAATGGTTGGTGGTAAGATTGCTAATGCT-CCTTTTGTACTAG 184325 |||| | | || ||| |||| || | ||| || | ||| || | ||| Sbjct 27474643 GGGCGGTGAGTTAGTAGCAGTGG---GTGGCAAAGTAGCTT-TGTTACCTATTCCATTAG 27474588 Query 184326 GTACAGCAGACTTTATGATACATCACATACACGC-TTTCCAGATTCATGTTTGTGTATTA 184384 | |||||||| ||| || ||||||| || || || ||| || |||||||| ||||| Sbjct 27474587 GCACAGCAGATTTTTTGGTACATCATATTCATGCATTTACA-ATTCATGTCACGGTATTG 27474529 Query 184385 ATTCTTCTCAAGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGTAAG 184444 || || | || |||||||||| || | | ||| | |||||||||||||| || || Sbjct 27474528 ATACTGTTGAAAGGTGTTTTATTTGCTCGTAGCTCGCGTTTAATACCAGATAA-AGCAAA 27474470 Query 184445 T-TAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAGG 184503 | | || || | || ||||||||||| ||||| |||||||| || ||||| ||||| | Sbjct 27474469 TCTTGGTTTTCGTTTTCCTTGTGATGGGCCTGGAAGAGGAGGAACATGTCAAGTATCCGC 27474410 Query 184504 ATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCTT 184563 ||||||||||| || | || ||||||||||||| ||| || || ||||||| || Sbjct 27474409 TTGGGATCATGTCTTTTTAGGACTATTCTGGATGTACAATGCTATTTCGGTAGTAATATT 27474350 Query 184564 CCACTTTAGTTGGAGAATGCA---AGATGTATGGGGTCT--------ATCA--------- 184603 ||| || ||||||| |||||| |||||| |||||| |||| Sbjct 27474349 CCATTTCAGTTGGAAAATGCAGTCAGATGTTTGGGGTAGTATAAGTGATCAAGGGGTAGT 27474290 Query 184604 -------------GGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAG 184650 ||||| |||||||| |||||||| ||||| || ||||| ||| | | Sbjct 27474289 AACTCATATTACTGGAGGAAACTTTGCACAGAGTTCGATTACTATTAATGGGTGGCTCCG 27474230 Query 184651 AGACTTCTTATGGTCACAGTCAAGTCAAGTTCTCAATAGTTATGGACAA--GACATCAGC 184708 || ||||||||| |||| || || || | | |||||| | ||| || Sbjct 27474229 CGATTTCTTATGGGCACAAGCATCCCAGGTAATTCAGTCTTATGGTTCTTCGTTATCTGC 27474170 Query 184709 ATGTATGGTTTGCTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTA 184768 || ||||| | | || || || || |||||||||||||| |||||||| ||||| ||| Sbjct 27474169 AT--ATGGTCTTTTTTTCCTAGGTGCTCATTTTGTATGGGCTTTCAGTTTAATGTTTCTA 27474112 Query 184769 TGGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAA 184828 | || || | || || |||||||| | || || || |||| |||||| ||||| ||| Sbjct 27474111 TTCAGCGGGCGCGGTTATTGGCAAGAACTTATTGAATCCATTGTTTGGGCTCATAATAAA 27474052 Query 184829 TTAAAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTT 184888 |||||| |||| ||| | | ||| || ||||| || ||| ||||||||||||||| Sbjct 27474051 TTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTACAAGGACGTGCTGTA 27473992 Query 184889 GGAGTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTCAC 184948 ||||| | || | | | || || || ||||||||||||||||| |||||||| || Sbjct 27473991 GGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGA 27473932 Query 184949 CTTATCCCCTTAAGTTAAATCATGGCTACTA-------AAAC-------------AAAAT 184988 |||| | || | ||| |||||| | ||| || || Sbjct 27473931 ATTATTGCAGTAGGATAA----TGGCTAGGAGGATTTGAAAGGCATTATGGCATTAAGAT 27473876 Query 184989 TTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGAT 185048 |||||| |||| |||| || || || || || ||| | | | |||| ||| Sbjct 27473875 TTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTA 27473816 Query 185049 TAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGT-TATATCAA 185107 | || || ||||||||||| ||||||||||| |||| || ||||| | || | ||||| Sbjct 27473815 TTGCTACCGCACATGACTTCGAGAGTCATGATGATATTACTGAAGA-ACGTCTTTATCAG 27473757 Query 185108 AAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAAT 185167 || | |||||| | || || || || | ||||| || ||||| ||| | | || ||| Sbjct 27473756 AATATTTTTGCTTCTCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAAT 27473697 Query 185168 TTAATTCATATAGCATGGCAAGGTAACTTTGA-ACAGTTTGTAGC--AGACCCACAACAT 185224 ||| ||||| |||| |||||||| || ||||| ||| || | | |||||| |||| Sbjct 27473696 TTATTTCATGTAGCTTGGCAAGGAAATTTTGAGACA---TGGATCCAAGACCCTTTACAT 27473640 Query 185225 GTGATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGCA 185284 || | ||| || || ||| || ||||||||||||||||||||| || || || Sbjct 27473639 GTAAGACCAATTGCTCATGCTATTTGGGATCCTCATTTTGGTCAACCGGCTGTGGAAGCG 27473580 Query 185285 TACACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTGG 185344 | || | | |||| || | || ||||| | | |||||||| | ||||| ||| Sbjct 27473579 TTTACTCGAGGAGGTGCTCTTGGCCCGGTGAATATAGCTTATTCTGGTGTTTATCAGTGG 27473520 Query 185345 TGGTACACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATTTATGATT 185404 ||||| ||| | ||| | | |||||| | || |||||||| | | ||| | | Sbjct 27473519 TGGTATACAATCGGTTTACGTACTAATGAAGATCTTTATACTGGAGCTCTTTTTCTATTA 27473460 Query 185405 CTACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACCT 185464 | || | |||| ||| | || | | ||||| || ||||||| | ||| Sbjct 27473459 TTTCTTTCTGCCCTATCCTTAATAGGGGGTTGGTTACACCTCCAACCAAAATGGAAACCA 27473400 Query 185465 AAGCTTGCTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTATTT 185524 | || | ||||| ||| || ||| | | ||||||||| | |||| ||||| Sbjct 27473399 AGAGTTTCGTGGTTCAAAAATGCTGAATCTCGTCTGAATCATCATTTGTCAGGACTATTC 27473340 Query 185525 GGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCAAGA 185584 || | || || | || ||| | |||||||| | || || || || |||||||| || Sbjct 27473339 GGGGTAAGCTCCTTGGCTTGGACAGGTCATTTAGTCCATGTCGCTATTCCTGCATCCAGG 27473280 Query 185585 GG--AATCACTGTAGATTGGACTAATTATGTGTTTATGAA--ACCTCATCCTGCAGGTTT 185640 || ||| | | ||| ||| ||||| | | | ||| | ||| ||||| ||| || Sbjct 27473279 GGGGAATATGT-TCGAT-GGAATAATT-TCT-TAAATGTATTACCGCATCCCCAAGGGTT 27473224 Query 185641 ACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGATTAAATCA 185700 | ||| | ||||| || | ||| | ||||||| ||||| || ||| | | ||| Sbjct 27473223 AGGCCCACTTTTTACGGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAGCAGTCA 27473164 Query 185701 AATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACA-TTCATGGGTGGTTTCC 185759 |||| ||| | | || || ||||| || || |||| ||| |||| || |||| Sbjct 27473163 TTTATTTGGTACCTCCCAAGGATCAGGAACTGCCATTCTAACCCTTCTTGGG-GGATTCC 27473105 Query 185760 ATCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGAG 185819 |||||||||| | |||||| | || ||||| ||||||||||| || || || | | Sbjct 27473104 ATCCACAAACCCAAAGTTTATGGCTAACCGATATGGCACATCATCATCTAGCTATCGCAA 27473045 Query 185820 TAATATTCATTATTGCAGGTCATATGTATAGAAGTGCTTGGGGTATTGGTCACTCAATGA 185879 | | ||| | ||||| |||||||||||||||| | | || || || ||| || | Sbjct 27473044 TTCTTTTCCTCATTGCGGGTCATATGTATAGAACTAACTTTGGAATCGGACACAGTATAA 27472985 Query 185880 AGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCA-GGTCATAAAGGA 185938 | || | | |||||||||| || || ||||| | || || || || ||||| || Sbjct 27472984 AAGATCTTTTAGAAGCACATATTCCTCCGGGAGGACG-CTTGGGGCGTGGGCATAAGGGT 27472926 Query 185939 TTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCTA 185998 | ||||| ||| | | | || | || | || ||||| ||||| || || || || Sbjct 27472925 CTTTATGATACAATCAATAATTCGATTCATTTTCAATTAGGCCTTGCTCTAGCCTCCTTA 27472866 Query 185999 GGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCATA 186058 || ||| ||||| |||| || ||||| |||||||| | || | ||||| |||||| Sbjct 27472865 GGGGTTATTACTTCCTTGGTAGCTCAACACATGTACTCTTTACCTGCTTATGCGTTCATA 27472806 Query 186059 GCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCA--ACTG 186116 || || | ||| || |||||||| ||||| ||||| |||||||||||| | | Sbjct 27472805 GCGCAAGATTTTACGACTCAAGCTGCGTTATATACCCATCACCAATACATTGCAGGATTC 27472746 Query 186117 CTCTGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTA 186176 || ||| || |||||||| |||||||| ||||||||| ||||||| | | || Sbjct 27472745 ATC--ATGACAGGAGCTTTTGCTCATGGAGCTATATTTTTTATTAGAGATTACAACCCAG 27472688 Query 186177 CTCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTC 186236 | |||| |||| || || | | |||||| || | || |||||||| || ||| | Sbjct 27472687 AACAGAATGAGGATAACGTATTGGCAAGAATGTTAGACCATAAAGAAGCTATCATATCCC 27472628 Query 186237 ACTTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATG 186296 | |||||||||| || || || || ||||||||||| || | ||||| ||||||| Sbjct 27472627 ATTTAAGTTGGGCCAGCCTCTTTCTAGGGTTCCATACTTTGGGCCTTTATGTTCATAATG 27472568 Query 186297 ATGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCAC 186356 | || | | || |||||| ||| || | ||| || || || ||||| |||||||| | Sbjct 27472567 ACGTCATGCTTGCTTTTGGTACTCCCGAAAAACAAATCTTGATCGAACCCATATTTGCCC 27472508 Query 186357 AGTGGATACAGGCAGCATCA-GGTAAGATGATGTATGGATTAAGTTTCTTACTATCTGAT 186415 | |||||||| | || ||| || || | |||||||| | | | ||||| Sbjct 27472507 AATGGATACAATCTGC-TCATGGGAAAACTTCATATGGATTTGATGTACTTTTATCTTCG 27472449 Query 186416 CCAAATAGTGCTGCAAGTCTAGCAG--CAGAGAGTATGCCTGGTAATCATTACTGGATGA 186473 ||||| | | ||| | || | | || |||| ||| | |||| | | Sbjct 27472448 ACAAATGGCCCAGCATTTAATGCGGGTCGAAGCATATGGCTG-----CCCGGCTGGTTAA 27472394 Query 186474 GTGCTATGAATGATCAAACAAACAGTCTGTTTCTACCAATAGGACCTGCTGATTTATTAG 186533 |||||| ||||| | | || | || || ||||||| |||| ||||| || | Sbjct 27472393 ATGCTATTAATGAGAATAGTAATTCATTATTCTTAACAATAGGCCCTGGAGATTTCTTGG 27472334 Query 186534 TTCATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGGTGCAT 186593 |||||||||| ||||| | || |||||||| || || || ||| |||| || ||||| | Sbjct 27472333 TTCATCATGCGATTGCTTTAGGTTTACATACAACTACATTGATCTTAGTAAAAGGTGCTT 27472274 Query 186594 TAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATTCCCTT 186653 ||||||| | ||||| || | || |||||||| || ||||| || ||| || |||| Sbjct 27472273 TAGATGCACGTGGTTCCAAGTTAATGCCAGATAAAAAGGATTTCGGGTATAGTTTTCCTT 27472214 Query 186654 GTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTATCTCT 186713 | |||||||| || |||||||||||||||||| ||| | |||||| || || ||| | Sbjct 27472213 GCGATGGTCCGGGACGAGGTGGTACTTGTGATATTTCGGCTTGGGACGCATTTTATTTGG 27472154 Query 186714 CTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAA 186768 | || || ||| || ||||| || | ||||| |||||||||||| ||||| Sbjct 27472153 CAGTTTTTTGGATGTTAAATACTATTGGATGGGTTACTTTTTATTGGCATTGGAA 27472099 Score = 293 bits (324), Expect = 3e-74 Identities = 687/1039 (66%), Gaps = 22/1039 (2%) Strand=Plus/Minus Query 190796 TTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCTGGT 190855 |||||| | | |||||||||||| | | | ||||| || |||||||||||||| Sbjct 12152902 TTTGATATTATGGATGACTGGTTACGGAGGTACTGCTTTGTTTTTGTAGGTTGGTCTGGT 12152843 Query 190856 CTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACATTT 190915 || | | || || ||||| | | | | || | |||||||||||| | || ||| Sbjct 12152842 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGATTGGTTCACAGGTGCAACCTTT 12152783 Query 190916 GTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTTTTG 190975 || ||| |||||||| |||||| | || ||| || | ||||| || |||| Sbjct 12152782 GTAACTTCATGGTATACTCATGGATTGGCTAGTTCCTATTTAGAAGGTTGCAATTTTTAA 12152723 Query 190976 ACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGGGGT 191035 || || || | || || |||| | || | | | ||| ||| || || | |||||| Sbjct 12152722 ACCGCTGCCATTTCGACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTGTGGGGT 12152663 Query 191036 CCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACTTTGTA 191095 | || |||||| | ||| |||||||| ||| | || || || | | ||||| Sbjct 12152662 CTTGAAGCACAAAGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTCTAGGCTTTTGTT 12152603 Query 191096 GCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCAGGA 191155 || || | || | |||| | ||| | || ||||||||||| |||||| |||| || Sbjct 12152602 GCTCTCTACGGCGCTTTTGCATTAATATGTTTTATGTTACGTCAATTTGAACTTGCTCGA 12152543 Query 191156 TTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTTCACA 191215 | || | | ||||| ||||| | || || |||| | || || ||||| Sbjct 12152542 TCCGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATCGCTGTTTTTGTT 12152483 Query 191216 AGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATTTGGA 191275 ||| || |||| |||||||| ||||| ||||||||||||| ||| ||||| Sbjct 12152482 TTTGTCCTCCTAATTTATCCACTGGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 12152423 Query 191276 GTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACACTCAAC 191335 || || || || ||| ||| || || || | ||||| || || ||| | | | ||| Sbjct 12152422 GTAGCGGCTATATTTCGATTCATCCT-TTTTTCCAAGGGTTTCATAATTGGATATTGAAC 12152364 Query 191336 CCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCAT 191395 || || || ||||||||||| | ||| | || || | || | ||||| || |||||| Sbjct 12152363 CCATTTCATATGATGGGAGTCGTCGGTGTACTCGGCGCCGCTCTGCTATGCGCTATTCAT 12152304 Query 191396 GGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGTCAAGTT 191455 |||||||| ||| | || || || | ||| ||||||| | | | Sbjct 12152303 GGTGCTACTGTAGAAAATACTTTATTTGA------------------AGATGGTGATGGT 12152262 Query 191456 CAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTATGATC 191515 || |||| || | || ||| | ||||| || | ||| ||||||||||| ||| || Sbjct 12152261 GCAAATACA---TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTC 12152205 Query 191516 ACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATTTCTA 191575 || || ||| | || |||||| | | ||||| |||| || || || ||| | | || Sbjct 12152204 ACCGCTAACCGCTTTTGGTCATAATTCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 12152145 Query 191576 CACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTATTGTA 191635 || |||| ||||| ||||| | |||| || | |||| | | || | || Sbjct 12152144 CATTTCTATATGTTATTTGTATCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTC 12152085 Query 191636 GGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAA 191695 || || || | ||| || | || ||||| || || || || || | | ||||| ||| Sbjct 12152084 GGCCTAGCTTTGAACCTATGTGCCTATGACTTCGTTTCCCAGGAAACCCGTGCAGCGGAA 12152025 Query 191696 GACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 191755 || | | ||||| || ||| ||||||| || |||||| | || |||||||| | || Sbjct 12152024 GATTCGAAATTTGAGACTTTCAATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 12151965 Query 191756 TGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCT 191815 |||||| | | |||| | |||||||| ||| || | |||| ||||| |||||||| Sbjct 12151964 TGGATGGCGGCTCTAGATAAGCCTCATGAAAACCTTATATTCCTTGAGGAGGTTCTACCA 12151905 Query 191816 AGAGGAAATGCATTGTAAT 191834 | ||||| || | |||| Sbjct 12151904 CGTGGAAACGCTCTTTAAT 12151886 Score = 253 bits (280), Expect = 3e-62 Identities = 378/534 (71%), Gaps = 2/534 (0%) Strand=Plus/Minus Query 182847 TAGCAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGATT 182906 |||| || |||||| | || ||||| ||||| ||||| |||| || |||||||| |||| Sbjct 27476060 TAGCTAAGGGACCTGATACTACCACTTGGATCTGGAACCTACATGCTGATGCTCACGATT 27476001 Query 182907 TTGATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTTG 182966 |||||| ||| | |||||| || | || | || ||||| ||||| ||| || || | Sbjct 27476000 TTGATAGTCATACCAGTGATTTGGAGGAAATCTCTCGAAAAGTATTTAGTGCTCATTTCG 27475941 Query 182967 CTCATCTAGGTATCATCTTTGTATGGATGAGCAGTTTCTTCTTTCAAGGTGCTAGGTTTT 183026 || || |||||||||| | ||| |||| | | | || || |||||| | |||| Sbjct 27475940 GCCAACTCTCTATCATCTTTCTTTGGCTGAGTGGCATGTATTTCCACGGTGCTCGTTTTT 27475881 Query 183027 CAAACTATACAGGATGGTTGGCAGACCCAACTCATGTAAAACCTGGTGCTCAAGTGGTTT 183086 | || ||| || |||| || || || ||||| | |||| ||||||| ||||||| Sbjct 27475880 CCAATTATGAAGCATGGCTGAGTGATCCTACTCACATTGGACCTAGTGCTCAGGTGGTTT 27475821 Query 183087 GGCCTATACTTGGTCAAGAGATATTGAATGGAGATCAGGGTGCAGGATATCAAGGTATTA 183146 |||| ||| | || ||||| || ||||||||||| ||| | ||| | | ||| || Sbjct 27475820 GGCCAATAGTGGGCCAAGAAATCCTGAATGGAGATGTGGGCGGAGGCTTCCGAGGAATAC 27475761 Query 183147 GAATTACATCTGGTTTATTTCAGATGTGGAGAGCATGGGGTATAACAAATGAAACTCAAC 183206 ||| || ||||| || |||||||| ||| |||||| || ||||| | |||| |||| Sbjct 27475760 AAATAACCTCTGGCTTTTTTCAGATTTGGCGAGCATCTGGAATAACTAGTGAATTACAAC 27475701 Query 183207 -TAATGGCGCTAGCACTAGGTGCTTTAGTTATGGCAGCAGTTATGTTTAATGCTGGTGCA 183265 | || | | ||| | || || || || | ||||| | ||| || ||||||| Sbjct 27475700 TTTATTGTAC-CGCAATTGGCGCATTGGTCTTCGCAGCCTTAATGCTTTTTGCTGGTTGG 27475642 Query 183266 TTTCATTTTCACGTTGCTGCTCCTAAGTTATCATGGTTTCAGAATGTAGAATCTATGATG 183325 || |||| |||| || ||||| || || | ||||| || |||||||||||||| || Sbjct 27475641 TTCCATTATCACAAAGCAGCTCCAAAATTGGCTTGGTTCCAAGATGTAGAATCTATGTTG 27475582 Query 183326 AATCATCACCTTGCAGGTTTGCTTGGTCTTGGTTCTTTAGGATGGGCAGGACAT 183379 ||||| || | ||||| | || || ||||| || | |||||||||||| Sbjct 27475581 AATCACCATTTAGCAGGGCTACTAGGACTTGGGTCCCTTTCTTGGGCAGGACAT 27475528 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 191707 TGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGATGTCTTC 191766 ||| || ||||||||||| || |||||| | || |||||||| | || |||||| | | Sbjct 27467488 TGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGC 27467547 Query 191767 AGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCTAGAGGAAATGC 191826 ||| || |||||||| ||| || | ||||| ||||| |||||||| | ||||| || Sbjct 27467548 TCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 27467607 Query 191827 ATTGTAAT 191834 | |||| Sbjct 27467608 TCTTTAAT 27467615 >seq20831 Length=3535 Score = 408 bits (452), Expect = 5e-109 Identities = 534/739 (72%), Gaps = 0/739 (0%) Strand=Plus/Minus Query 189705 TTGGTTGGTTTGGTGTACTCATGATTCCATGCTTGCTCGCAGCAGCAGCATGCTTCGTTG 189764 |||| ||||||||||| | ||||| || ||| | | ||| | | || || Sbjct 744 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTA 685 Query 189765 TTGCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTT 189824 | ||||| ||||| || || || ||||| |||||||| || | || || ||| | || | Sbjct 684 TCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGAT 625 Query 189825 CACTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTG 189884 | ||||| || || ||||| || ||||| ||||| || | ||| | || ||||||| Sbjct 624 CTCTTCTTTACGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTG 565 Query 189885 GTCTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTG 189944 || | || || ||||| ||||||||||| ||| | || ||||| ||||| ||||| || | Sbjct 564 GTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCG 505 Query 189945 GTCCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGAC 190004 ||||||| | | | | | ||||| | ||||| | | || ||||| | Sbjct 504 GTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTG 445 Query 190005 AGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCAC 190064 |||||||| | | | | || |||||| | |||||||| |||||| |||||||| | Sbjct 444 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTC 385 Query 190065 CAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTG 190124 | || | || ||| ||| || ||| | | |||||| ||||||| || || |||| Sbjct 384 CTGTTGCAGCTGCAACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGTTTTTCTG 325 Query 190125 ATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAAC 190184 ||||||||||| |||| ||||| ||||| |||||||| ||| |||||||||| || || | Sbjct 324 ATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGC 265 Query 190185 ATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCAT 190244 | || || |||||||||||||| || ||| ||||||||| ||| | || || || | | Sbjct 264 ACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCT 205 Query 190245 TATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTT 190304 |||| ||| ||||||||||| | ||||| ||| | | ||||| ||||| || | Sbjct 204 TATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAA 145 Query 190305 TAGAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAG 190364 || || || | ||||||| || ||||||||||||||||| |||||||| |||| Sbjct 144 ATGAATCTGCTAATGAAGGTTACAGATTCGGACAAGAAGAAGAAACTTACAACATTGTAG 85 Query 190365 CTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAA 190424 ||||||||||||| ||||| || | |||||||| |||||| |||||||| || | Sbjct 84 CTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTT 25 Query 190425 GTTTACACTTCTTCTTAGC 190443 |||||| ||||||||||| Sbjct 24 CTTTACATTTCTTCTTAGC 6 >seq7 Length=29178675 Score = 174 bits (192), Expect = 2e-38 Identities = 187/245 (76%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 182486 ATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCT 182545 ||||| || |||| |||| |||||||| || || ||||| || |||||||| || Sbjct 11065322 ATGTCACATTCCGTAAAAAATTATGATACATGTATAGGATGTACTCAATGTGTCCGAGCA 11065263 Query 182546 TGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCT 182605 || || ||| |||||||||||| | ||||||||||| || ||||| ||| |||| ||| Sbjct 11065262 TGCCCTACGGACGTATTAGAAATGATACCTTGGGATGGATGTAAAGCTAAGAAAATAGCT 11065203 Query 182606 TCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACA 182665 || | || ||||| ||||| ||||| || ||||||||||| ||| | || ||||| || Sbjct 11065202 TCTGCTCCAAGAACCGAGGACTGTGTTGGTTGTAAGAGATGCGAATCCGCCTGTCCAACG 11065143 Query 182666 GACTTTTTAAGTATTCGTGTTTACTTGGGTGCA-GAAACCACAAGAAGCATGGGTCTAGC 182724 || ||||| || | || ||||| || | ||| ||||| || |||| ||||||||||| Sbjct 11065142 GATTTTTTTAGCGTCCGAGTTTATTTATG-GCATGAAACAACTCGAAGTATGGGTCTAGC 11065084 Query 182725 ATATT 182729 |||| Sbjct 11065083 TTATT 11065079 Score = 114 bits (126), Expect = 2e-20 Identities = 197/290 (68%), Gaps = 21/290 (7%) Strand=Plus/Minus Query 191309 CAAGGTTTCCACAATATTACACTCAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTA 191368 ||||| || || ||| ||| ||||| || || ||||||||||| || ||| | || Sbjct 25949506 CAAGGGTTTCATAATTGGACATAGAACCCATTTCATATGATGGGAGTCGCCGGTGTACTG 25949447 Query 191369 GGTGGAGCATTACTATGTGCCATTCATGGTGCTACAGTACAGAACACCTTGTATGAGGAC 191428 || | || | ||||| || |||||||||||||| ||| | || || || | ||| Sbjct 25949446 GGCGCCGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGA---- 25949391 Query 191429 TCAAGCATCTATACAGATGGTCAAGTTCAAAGTACAACCTTTAGAGCATTTGATCCAACA 191488 ||||||| | | | || |||| || | || ||| | ||||| Sbjct 25949390 --------------AGATGGTGATGGTGCAAATACA---TTCCGTGCTTTTAACCCAACT 25949348 Query 191489 CAGGATGAGGAAACTTATTCTATGATCACTGCAAACAGATTCTGGTCACAGATATTTGGT 191548 || | ||| ||||||||||| ||| |||| || ||| | || |||||||| || ||||| Sbjct 25949347 CAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGG 25949288 Query 191549 ATTGCATTCTCTAACAAAAGATTTCTACACTTCTTGATGTTGTTTGTTCC 191598 |||| || || || ||| | | |||| ||||| ||||| ||||| || Sbjct 25949287 GTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACC 25949238 >seq2 Length=28351830 Score = 127 bits (140), Expect = 3e-24 Identities = 226/336 (67%), Gaps = 34/336 (10%) Strand=Plus/Minus Query 182847 TAGCAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGATT 182906 |||| || |||||| | || ||||| ||||||||||| |||| || |||||||| |||| Sbjct 7161261 TAGCTAAGGGACCTGATACTACCACTTGGATATGGAACCTACATGCTGATGCTCACGATT 7161202 Query 182907 TTGATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTTG 182966 |||||| ||| | |||||| |||| ||| || | Sbjct 7161201 TTGATAGTCATACCAGTGAT------------------------TTTGATGCCAAC---G 7161169 Query 182967 CTCATCTAGGTATCATCTTTGTATGGATGAGCAGTTTCTTCTTTCAAGGTGCTAGGTTTT 183026 ||| ||| |||||| | ||| |||| | | | || || |||||| | |||| Sbjct 7161168 CTC-------TATAATCTTTCTTTGGCTGAGTGGCATGTATTTCCACGGTGCTCGTTTTT 7161116 Query 183027 CAAACTATACAGGATGGTTGGCAGACCCAACTCATGTAAAACCTGGTGCTCAAGTGGTTT 183086 | || ||| || |||| || || || ||||| | |||| ||||||| ||||||| Sbjct 7161115 CCAATTATGAAGCATGGCTGAGTGATCCTACTCACATTGGACCTAGTGCTCAGGTGGTTT 7161056 Query 183087 GGCCTATACTTGGTCAAGAGATATTGAATGGAGATCAGGGTGCAGGATATCAAGGTATTA 183146 |||| ||| | || ||||| || ||||| ||||| ||||| ||| | | ||| || Sbjct 7161055 GGCCAATAGTGGGCCAAGAAATCCTGAATAGAGATGTGGGTGGAGGCTTCCGAGGAATAC 7160996 Query 183147 GAATTACATCTGGTTTATTTCAGATGTGGAGAGCAT 183182 ||| || ||||| || |||||||| ||| |||||| Sbjct 7160995 AAATAACCTCTGGCTTTTTTCAGATTTGGCGAGCAT 7160960 >seq6 Length=37079636 Score = 95.1 bits (104), Expect = 2e-14 Identities = 147/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 189705 TTGGTTGGTTTGGTGTACTCATGATTCCATGCTTGCTCGCAGCAGCAGCATGCTTCGTTG 189764 |||| ||||||||||| | |||||||| ||| | | ||| | | || | Sbjct 27053882 TTGGATGGTTTGGTGTTTTGATGATTCCTACCTTATTGACCGCAACTTCCGTTTTTAATA 27053823 Query 189765 TTGCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTT 189824 | ||||| ||||| | || || ||||| |||||||| || | || | ||| | || | Sbjct 27053822 TCGCATTCATTGCTACTCCTCCAGTAGATATTGATGGTATTCGTGAATCTGTTTCTGGAT 27053763 Query 189825 CACTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTG 189884 | ||||| ||||| ||||| || ||||| ||||| || | ||| | ||| |||||| Sbjct 27053762 CTCTTCTTTATGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCAGCAGCTATT- 27053704 Query 189885 GTCTACACTTCTACCCAATCTGGGAAGCA 189913 || | || || ||||| |||||||||||| Sbjct 27053703 GTTTGCATTTTTACCCGATCTGGGAAGCA 27053675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631208007940360