Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq8 170 5e-37 seq6 156 1e-32 seq3 154 4e-32 seq5 149 1e-30 seq7 140 8e-28 seq4 140 8e-28 seq1 131 4e-25 >seq8 Length=40886855 Score = 170 bits (188), Expect = 5e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||||||| ||||| ||||| |||| |||||||| || | ||| Sbjct 1189834 ACGAAGACGCAAGACAAGGTGGAGTGTGGACTCTTTCTGGATGTTGTAATCCGCAAGAGT 1189893 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| |||||||| |||||||||||||||| ||| || || || ||||| || Sbjct 1189894 CCTTCCATCTTCAAGCTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGAATTCC 1189953 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||| |||||||| ||| ||| || || || || ||| |||| || || | Sbjct 1189954 CTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATAGTATCGGAGCTTTCAACCTCAAG 1190013 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || |||||||| || | || | |||||| Sbjct 1190014 AGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 1190055 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || || |||| |||||| ||||| | ||| || |||||||| || ||||| ||| Sbjct 1190087 GTCGACTCCTTCTGGATATTGTAGTCGGCAAGAGTCCTTCCATCTTCAAGTTGCTTACCA 1190146 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 ||||||||||||| ||| || || || ||||||||||||||||| ||||||||| ||| Sbjct 1190147 GCGAAGATAAGTCTTTGCTGATCCGGAGGAATACCTTCCTTGTCCTGGATCTTTGCCTTA 1190206 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| ||||| ||||| ||| | || || || | || || ||||| || || | |||| Sbjct 1190207 ACATTATCGATAGTGTCAGAGCTCTCGACCTCGAGAGTTATGGTCTTTCCAGTAAGAGTT 1190266 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 1190267 TTCACGAATATTTGCAT 1190283 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || ||||| ||||| || |||| |||||||| || | ||| Sbjct 1188625 ACGAAGACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCAAGAGT 1188684 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| || ||||| || ||||||||||||| || || || || ||||| || Sbjct 1188685 CCTTCCATCTTCAAGTTGCTTACCGGCGAAGATAAGTCTCTGCTGATCCGGAGGAATCCC 1188744 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| || ||||| ||||||| || || ||||||||| | ||||| || | Sbjct 1188745 TTCCTTGTCCTGAATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACCTCAAG 1188804 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || || | || || | ||| | ||||| Sbjct 1188805 GGTAATGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 1188846 Score = 93.3 bits (102), Expect = 1e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| ||||||||||| || || |||||||| | || || || || || || |||||| Sbjct 1189670 CCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGGATTCCTTCC 1189729 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| || ||||| ||| || || || ||||||||| | ||||| || || ||| Sbjct 1189730 TTGTCCTGAATCTTAGCCTTGACGTTATCAATAGTGTCTGAGCTCTCCACCTCCAAAGTG 1189789 Query 225676 ATCGTCTTGCCCGT 225689 || ||||| || || Sbjct 1189790 ATAGTCTTACCAGT 1189803 >seq6 Length=37079636 Score = 156 bits (172), Expect = 1e-32 Identities = 140/176 (80%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 ||||| |||| |||||||| ||||||||||| || ||||| |||||||| || |||||| Sbjct 13447585 TCTTTCTGGATGTTGTAATCAGCCAAAGTTCTGCCGTCTTCAAGCTGCTTACCGGCGAAG 13447526 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 || | || || ||||| || |||||||| || ||||||||||||||| ||||||| Sbjct 13447525 ATCAATCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTA 13447466 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || || || ||| |||| || || || || || |||||||||||||| || || Sbjct 13447465 TCAATAGTATCGGAGCTTTCAACTTCCAAAGTAATGGTCTTGCCCGTCAAGGTCTT 13447410 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||||||||| || || || |||| ||||| || |||||||| | ||||| Sbjct 19969548 AGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCC 19969607 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| || || || ||||| || || |||||||||||||| Sbjct 19969608 TCAAGCTGTTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGGATACCTTCCTTGTCC 19969667 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || || ||||| ||| | || || || | ||||| ||| Sbjct 19969668 TGGATCTTAGCCTTGACATTGTCAATTGTGTCAGAGCTCTCGACTTCAAGGGTGATGGTC 19969727 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | ||| | ||||| Sbjct 19969728 TTTCCAGTAAGAGTCTTCACGAAAATCTGCAT 19969759 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| || || || | ||| ||||| || || || |||| ||||||||| ||||| || Sbjct 19970450 ACGAAGCCTGAGAACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAATCCGCCAAGGT 19970509 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| ||||||||||| | || || || || || ||||| || Sbjct 19970510 ACGGCCATCTTCCAACTGCTTTCCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATTCC 19970569 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||||||||| ||| || ||||| ||||| || ||||||| || | Sbjct 19970570 CTCCTTATCTTGGATCTTAGCCTTAACGTTGTCGATCGTGTCAGAACTTTCCACCTCGAG 19970629 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || | |||||| Sbjct 19970630 GGTGATAGTCTTTCCGGTGAGAGTTTT 19970656 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | |||||| || || ||||| || | |||||||| |||| || | ||||| Sbjct 13448354 AGGACCAAGTGGAGGGTCGACTCTTTCTGAATGTTGTAATCCGCCAGTGTACGACCATCC 13448295 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || |||||||||||||| || Sbjct 13448294 TCAAGCTGCTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGAATACCTTCCTTATCC 13448235 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| || || || || ||| | || || || | ||||| ||| Sbjct 13448234 TGGATCTTGGCCTTCACGTTATCAATAGTATCAGAGCTCTCAACTTCAAGTGTGATTGTC 13448175 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 13448174 TTGCCGGTAAGAGTCTTCACGAAAATCTGCAT 13448143 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | ||| | || || || ||||||| |||||| || ||||| || Sbjct 13447907 CGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTA 13447848 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||| || || ||||| | | || ||||| || ||||||||| Sbjct 13447847 CGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGAATACCT 13447788 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||| |||||||||||| |||||| || || ||||| ||| | ||||| || | Sbjct 13447787 TCCTTATCTTGGATCTTTGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCCACCTCGAGA 13447728 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || ||||| || || | ||| | |||||| Sbjct 13447727 GTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 13447687 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| ||||| ||||| || |||| ||||||||| ||||| || Sbjct 13447160 ACGAAGACGCAACACCAAGTGAAGAGTTGATTCCTTCTGGATATTGTAATCCGCCAAGGT 13447101 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||| | ||||| ||||||||||| | || || || || || ||||| || Sbjct 13447100 ACGCCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATCCC 13447041 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || ||||| || ||| ||||| || || || ||||||| || | Sbjct 13447040 TTCCTTATCCTGAATCTTCGCTTTAACATTGTCGATCGTATCAGAACTTTCCACCTCGAG 13446981 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || | |||||| Sbjct 13446980 AGTGATTGTCTTTCCGGTGAGAGTTTT 13446954 Score = 127 bits (140), Expect = 5e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 || ||||| | |||||| || ||||| || |||| |||||||| || | ||||| ||| Sbjct 33565070 CTGAGGACCAAGTGGAGGGTTGATTCCTTCTGGATGTTGTAATCCGCAAGAGTTCGACCA 33565011 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 || || |||||||| || || ||||| || | || ||||| || || || ||||||||| Sbjct 33565010 TCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTG 33564951 Query 225619 TCTTGGATCTTTTGCTTCA-CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| || ||| |||| | || || |||||||||||| | || || |||| || || Sbjct 33564950 TCTTGAAT-TTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCGACTTCTAGGGTAAT 33564892 Query 225678 CGTCTTGCCCGT 225689 ||| || || || Sbjct 33564891 CGTTTTACCAGT 33564880 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| || || ||||| || ||||| || || || |||| ||||||||| || | ||| Sbjct 13447388 ACGAAGCCTGAGCACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGT 13447329 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| | | || || || || |||||||| Sbjct 13447328 ACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGAGGAATACC 13447269 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||| ||||| ||||| ||||||||||| || | || || || | Sbjct 13447268 TTCCTTATCTTGAATCTTAGCTTTCACGTTATCGATGGTGTCAGAACTCTCAACCTCGAG 13447209 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || || || || ||||| || || Sbjct 13447208 AGTAATAGTTTTACCAGTCAAGGTCTT 13447182 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| ||||| || ||||| || | ||||| || || || || | |||||| Sbjct 33565523 AGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCT 33565464 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || || || ||||| || | || ||||| || || || |||||||| ||| Sbjct 33565463 TCGAGTTGTTTTCCCGCAAAGATTAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCT 33565404 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| || || || || ||| |||| || || | || |||||| Sbjct 33565403 TGAATCTTCGCTTTCACATTGTCAATTGTATCCGAGCTTTCGACCTCAAGAGTTATCGTC 33565344 Query 225682 TTGCCCGTCAAAGTTTT 225698 || ||||||||||| || Sbjct 33565343 TTTCCCGTCAAAGTCTT 33565327 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| || |||||||| || ||||| || || || |||| ||||| || || | ||| Sbjct 19970222 ACGAAGCCTGAGGACAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGAGT 19970281 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || || ||||| || || ||||| | | || || || || ||||| || Sbjct 19970282 ACGACCGTCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGAATTCC 19970341 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||| || || |||||||| || | || || || | Sbjct 19970342 CTCCTTGTCTTGGATCTTAGCCTTAACGTTATCAATGGTGTCAGAACTCTCAACCTCGAG 19970401 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || ||||| || || | ||| | ||||| Sbjct 19970402 GGTAATAGTCTTACCAGTCAAGGTCTTAACGAAGATCTGCAT 19970443 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || ||||| || || | || ||||| || | |||| ||||| || || || Sbjct 33565286 TGCAGGGTTGATTCCTTCTGAATGTTATAATCCGCAAGCGTTCGACCATCCTCAAGTTGT 33565227 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| ||||| |||| |||||||| || || || |||||||||||||| ||||| Sbjct 33565226 TTTCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCTTGAATCTTC 33565167 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| || || |||||||||||| | || || |||| || || || || || || Sbjct 33565166 GCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATAGTTTTACCAGTG 33565107 Query 225691 AAAGTTTT 225698 | ||||| Sbjct 33565106 AGGGTTTT 33565099 >seq3 Length=27950219 Score = 154 bits (170), Expect = 4e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || | ||||||||| || || ||||||| |||||||| ||||| || | || || Sbjct 5226836 CAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAGCCAAGGTACGGCCGTC 5226895 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || ||||| || || || |||||||| | ||||||||| || || || ||||| ||||| Sbjct 5226896 CTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAGGGATTCCTTCTTTGTC 5226955 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| || || ||||| |||||| ||| |||| || || | || || || Sbjct 5226956 TTGGATCTTGGCATTGACGTTTTCGACGGTGTCGGAGCTTTCGACCTCAAGTGTTATGGT 5227015 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||| | |||||| | ||| | |||||| Sbjct 5227016 CTTGCCCGTAAGAGTTTTCACGAAGATTTGCAT 5227048 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| || || ||||| ||||||| ||||||||| || | ||| Sbjct 5226599 ACGAAGACGAAGAACAAGGTGAAGTGTTGATTCCTTTTGGATATTGTAATCCGCAAGAGT 5226658 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| |||||||| || || || |||||||||| |||||||| || | || || Sbjct 5226659 ACGACCATCCTCTAGCTGTTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGAGATTCC 5226718 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||||||||| || || || |||||||||||| |||| || || | Sbjct 5226719 TTCTTTATCTTGGATCTTGGCTTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCGAG 5226778 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| || | ||||| | || | |||||| Sbjct 5226779 TGTTATGGTTTTGCCAGTTAGGGTTTTCACAAAGATTTGCAT 5226820 Score = 141 bits (156), Expect = 2e-28 Identities = 141/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| || || || || ||||||| ||||||||| || | ||| Sbjct 5226303 ACGAAGACGTAGCACAAGGTGAAGTGTAGACTCCTTTTGGATATTGTAATCCGCAAGAGT 5226362 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || ||||| || |||||||| ||||||| |||||||| || | || || Sbjct 5226363 GCGACCATCCTCGAGCTGTTTACCAGCGAATATAAGTCTCTGTTGGTCCGGAGTGATCCC 5226422 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||| ||||| ||| || ||||||||||||||| | || || ||||| Sbjct 5226423 TTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCAACTTCTAA 5226482 Query 225672 CGT 225674 || Sbjct 5226483 GGT 5226485 Score = 140 bits (154), Expect = 8e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || || ||||| || | ||||||||| || ||||| | |||||| Sbjct 5226096 AGAACAAGGTGAAGTGTTGACTCTTTCTGAATATTGTAATCAGCTAAAGTCCGACCATCT 5226155 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||||||||||||| | ||||| || | |||||||| || ||||| ||||| |||||| Sbjct 5226156 TCTAGCTGCTTCCCGACAAAGATTAGCCTCTGTTGGTCCGGTGGAATCCCTTCTTTGTCT 5226215 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| |||||| || || || || ||| | || || || | || || || Sbjct 5226216 TGTATCTTTGCCTTCACGTTATCAATCGTATCAGAGCTCTCTACCTCAAGAGTAATGGTT 5226275 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||||| ||| Sbjct 5226276 TTCCCTGTCAAAGATTT 5226292 Score = 132 bits (146), Expect = 1e-25 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 225520 GATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCG 225579 ||||| || |||| ||||| ||||||||||| | ||||||||||||| || | ||| Sbjct 16876862 GATTCCTTCTGGATTTTGTAGTCGGCCAAAGTACGGCCATCTTCTAGCTTTTTATCGGCG 16876803 Query 225580 AAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACA 225639 ||||| |||| || |||||| || ||||| || |||||||||||||||||| ||| ||| Sbjct 16876802 AAGATTAGTCTTTCTTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTTGCCTTAACA 16876743 Query 225640 GCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTT 225699 ||||| |||| || | || || || | | || |||||||| | | ||||| Sbjct 16876742 ATGTCGATCATGTCATAGCTCTCGACCTCGAGAATTATGGTCTTGCCAATGAGTGTTTTC 16876683 Query 225700 ATGAACACTTGCATTT 225715 | ||| | |||||||| Sbjct 16876682 ACGAATATTTGCATTT 16876667 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || ||||| || || | || ||||| || | |||| ||||| || || || Sbjct 14806177 TGCAGGGTTGATTCCTTATGAATGTTATAATCCGCAAGCGTTCGACCATCCTCAAGTTGT 14806118 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| ||||| |||| |||| ||| || || || |||||||||||||| ||||| Sbjct 14806117 TTTCCAGCAAAGATGAGTCTCTGTTAGTCCGGAGGGATTCCTTCCTTGTCTTGAATCTTA 14806058 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||| || ||||||| |||| | || || |||| || || || || || || Sbjct 14806057 GCTTTAACATTGTCAATGGTGTATGAGCTCTCGACTTCTAGGGTAATGGTTTTACCAGT 14805999 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/209 (69%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 |||||||| ||| || ||||| | ||||||||||| || ||||| | ||||||| | Sbjct 5216923 ACAAGGTGAAGAACTGACTCTTTCTCAACATTGTAATCAGCTAAAGTCCAACCATCTTTT 5216982 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 |||| |||||| || | || ||||||| || | || |||||||| || || Sbjct 5216983 AGCTCACGCCCAGCACAGGTTAGCTTCTGTTGGTACGGTAGGATCCCTTCCTTATCCTGA 5217042 Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684 ||||| ||||||| || || || || ||| | || || || | || || | | Sbjct 5217043 ATCTTCGTCTTCACACTGTCAATCGTATCAGAGCTCTCGACCTCGAGAGTTATGG---TT 5217099 Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || | |||||||| ||| | |||||| Sbjct 5217100 CCTGTAAGAGTTTTTACGAAGATTTGCAT 5217128 >seq5 Length=22804910 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||| || || || |||||||| |||| ||||| || || | ||| Sbjct 22133799 ACGAAGACGAAGGACAAGATGAAGCGTTGATTCTTTCTGGATGTTGTAGTCAGCGAGAGT 22133740 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || || || ||||||||||| | ||||| ||||| || || || || Sbjct 22133739 ACGTCCGTCTTCGAGTTGTTTTCCAGCGAAGATTAAACGTTGCTGGTCCGGTGGGATTCC 22133680 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| || ||| |||||||| ||||| | ||| || || | Sbjct 22133679 TTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTATCTGATGATTCAACCTCGAG 22133620 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| ||||| | ||||| | ||| | ||||| Sbjct 22133619 AGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 22133578 >seq7 Length=29178675 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| ||||| || || || |||| |||||||| || | || | ||||| Sbjct 2570597 AGAACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGTGTACGACCATCC 2570538 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || |||||||||||||| | |||| ||| || || || |||||||| ||| Sbjct 2570537 TCGAGTTGTTTACCAGCGAAGATAAGCCTCTGTTCGTCCGGAGGGATCCCTTCCTTATCT 2570478 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| | || ||||| |||||| |||| || || | || || ||| Sbjct 2570477 TGGATCTTCGCCTTGACATCGTCAATGGTTTCTGAGCTTTCGACCTCGAGGGTTATGGTC 2570418 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | || | |||||| Sbjct 2570417 TTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 2570386 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| ||||| || || || |||| |||||||| || | ||| | ||||| Sbjct 2570825 AGGACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGAGTACGACCATCC 2570766 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || ||||||||||| || | |||| ||| || || || |||||||| ||| Sbjct 2570765 TCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCCGGAGGGATCCCTTCCTTATCT 2570706 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || | || ||| |||||||| | || || ||||| || || || Sbjct 2570705 TGGATCTTCGCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACTTCTAAGGTAATAGTT 2570646 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || | ||||| | || | ||||||| Sbjct 2570645 TTACCAGTGAGTGTTTTCACAAATATTTGCATT 2570613 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| ||||| || || | ||||||||| | | |||| ||||| || ||||| Sbjct 2571044 TGCAGAGTTGATTCCTTCTGAATATTGTAATCCCCAAGGGTTCGACCATCCTCGAGCTGT 2570985 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| ||||| || | |||| ||| || || || |||||||| ||||||||||| Sbjct 2570984 TTACCAGCAAAGATGAGCCTCTGTTCGTCTGGAGGGATCCCTTCCTTATCTTGGATCTTC 2570925 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| || | || ||| |||||||| | || || ||||| || || || || || || Sbjct 2570924 GCCTTGACGTCGTCAATGCTGTCTGAGCTCTCAACTTCTAAGGTAATAGTTTTACCAGTG 2570865 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 | ||||| | || | ||||||| Sbjct 2570864 AGTGTTTTCACAAATATTTGCATT 2570841 >seq4 Length=23266485 Score = 140 bits (154), Expect = 8e-28 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| || || || || ||||| || |||| ||||| || |||| ||| Sbjct 22703207 ACGAAGACGAAGGACGAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCAGCCAGAGT 22703266 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || || || || |||||||| | ||||||||| || || || || || Sbjct 22703267 ACGTCCGTCTTCGAGTTGTTTTCCGGCGAAGATTAATCGTTGTTGATCCGGTGGGATTCC 22703326 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| ||| ||| ||||| || || || | ||| || || | Sbjct 22703327 TTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATTGTATCGGATGATTCAACCTCGAG 22703386 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||||||||| || || | ||||| | ||| | ||||| || Sbjct 22703387 AGTGATCGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCATCTT 22703431 Score = 116 bits (128), Expect = 9e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| ||||| || || ||||||| ||||| || || | ||| | ||||| Sbjct 5744954 AGGACAAGGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCCGCAAGAGTACGGCCATCC 5744895 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || |||||||||| | || || || || || |||||||||||| Sbjct 5744894 TCGAGCTGTTTACCCGCAAAGATAAGTCTCTTCTGTTCCGGAGGGATCCCTTCCTTGTCT 5744835 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| || ||| || |||||||||||| | || || |||| || || || Sbjct 5744834 TGAATCTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATGGTT 5744775 Query 225682 TT 225683 || Sbjct 5744774 TT 5744773 Score = 107 bits (118), Expect = 5e-18 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 225481 AAAATATTCTA--ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGT 225538 ||||| ||| | ||| || | ||||||||||| ||||| || ||||| || | |||| Sbjct 5738697 AAAATCTTCCACCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGT 5738638 Query 225539 AATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGT 225598 | || || ||||| | ||||| ||||| || || || | ||||| || | ||||||| Sbjct 5738637 AGTCCGCTAAAGTCCGACCATCCTCTAGTTGTTTTCCGGTAAAGATTAGCCTCTGTTGGT 5738578 Query 225599 CGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGG 225658 | | || || |||||||||||||| ||||| ||| | || || ||||||||| Sbjct 5738577 CCAGAGGGATTCCTTCCTTGTCTTGAATCTTCGCCTTGATGTTGTCAATAGTGTCTGAGC 5738518 Query 225659 TTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | || || |||| || || || || || || Sbjct 5738517 TCTCAACTTCTAGGGTAATAGTTTTACCAGT 5738487 >seq1 Length=25238555 Score = 131 bits (144), Expect = 4e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || |||||||| |||| ||||||| || | ||||| || ||||||| || Sbjct 18011447 TGAAGCGTTGATTCTTTCTGGATGCTGTAATCAGCGAGTGTTCTTCCGTCTTCTAATTGT 18011388 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || ||||| | ||||||||||| || ||||| |||||||||||||| ||||| Sbjct 18011387 TTTCCTGCAAAGATCAAACGTTGTTGGTCCGGTGGAATTCCTTCCTTGTCTTGAATCTTC 18011328 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 |||||| || || |||||||| | ||| || |||| || || ||||| ||||| Sbjct 18011327 GCTTTCACATTGTCAATTGTGTCTGAAGATTCAACCTCTAGGGTTATTGTCTTCCCCGTT 18011268 Query 225691 AAAGTTTTTATGAACACTTGCATTT 225715 | ||||| | || | ||||||| Sbjct 18011267 AGGGTTTTCACAAAGATCTGCATTT 18011243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192106878393074