Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq25817 98.7 2e-15 seq22893 98.7 2e-15 seq22516 98.7 2e-15 seq22508 98.7 2e-15 seq21172 98.7 2e-15 seq20845 98.7 2e-15 seq20757 98.7 2e-15 seq19684 98.7 2e-15 seq15593 98.7 2e-15 seq14405 98.7 2e-15 seq13829 98.7 2e-15 seq10684 98.7 2e-15 seq6944 98.7 2e-15 seq18099 86.0 1e-11 seq6448 86.0 1e-11 seq18539 84.2 5e-11 seq2826 84.2 5e-11 >seq25817 Length=36442 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 10378 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 10319 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 10318 CCCACGGTGGGC 10307 >seq22893 Length=62586 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 57667 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 57726 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 57727 CCCACGGTGGGC 57738 >seq22516 Length=82561 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 63107 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 63048 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 63047 CCCACGGTGGGC 63036 >seq22508 Length=16261 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 8467 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8408 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 8407 CCCACGGTGGGC 8396 >seq21172 Length=21299 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 19764 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 19705 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 19704 CCCACGGTGGGC 19693 >seq20845 Length=109154 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 98851 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 98792 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 98791 CCCACGGTGGGC 98780 >seq20757 Length=7935 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 1334 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1393 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1394 CCCACGGTGGGC 1405 >seq19684 Length=100171 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 49688 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 49747 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 49748 CCCACGGTGGGC 49759 >seq15593 Length=70921 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 33754 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 33695 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 33694 CCCACGGTGGGC 33683 >seq14405 Length=20136 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 2769 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2828 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2829 CCCACGGTGGGC 2840 >seq13829 Length=14302 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 2092 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2033 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2032 CCCACGGTGGGC 2021 >seq10684 Length=16725 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 11137 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 11078 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 11077 CCCACGGTGGGC 11066 >seq6944 Length=61004 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 57214 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 57273 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 57274 CCCACGGTGGGC 57285 >seq18099 Length=159039 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/204 (70%), Gaps = 11/204 (5%) Strand=Plus/Plus Query 229750 TTCTCTGCGTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCA 229809 |||| | ||| || || || || || | || ||||| ||||||||||| || | ||| Sbjct 20072 TTCTGTATGTTTCCGATTCACTACCCACAGATCTGGGAAATGTACAAGAAAGCCGAAGCA 20131 Query 229810 ACTTTCTGGACCACTGAGGAAGT---TC-CTCTGAACGCAGACGTCGTCGACTGGCGTGA 229865 | ||||||||| | || ||||| || ||| || || ||| |||||| || Sbjct 20132 TCCTTCTGGACCGCCGAAGAAGTCGATCTCTCACAAGACAACCGT----GACTGG---GA 20184 Query 229866 GAAACTCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTC 229925 || ||||| |||| |||||||| |||||||||||| | || | ||| ||||| | || Sbjct 20185 AAATCTCAACGACGGAGAACGTCACTTCATCAAACACGTACTCGCTTTCTTCGCCGCATC 20244 Query 229926 CGATGGTATTGTGATGGAAAATCT 229949 || || || || | ||||| || Sbjct 20245 TGACGGAATCGTACTCGAAAACCT 20268 >seq6448 Length=76080 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACGA 165776 ||||||||| |||||||||| || || |||| || |||||||||||||||||||||||| Sbjct 65123 TAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGG 65182 Query 165777 TGGGC 165781 ||||| Sbjct 65183 TGGGC 65187 >seq18539 Length=48280 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/65 (89%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 165258 CCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCACCGGTTCGAACCCG 165317 |||||||||||| | |||||| |||||||| |||||||||||||||||||||||||| Sbjct 21546 CCATAGCTCAGTGG--TAGAGCATTCGACTGCAGATCGAGAGGTCACCGGTTCGAACCCG 21489 Query 165318 GTTGG 165322 ||||| Sbjct 21488 GTTGG 21484 >seq2826 Length=7991 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/65 (89%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 165258 CCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCACCGGTTCGAACCCG 165317 |||||||||||| | |||||| |||||||| |||||||||||||||||||||||||| Sbjct 4236 CCATAGCTCAGTGG--TAGAGCATTCGACTGCAGATCGAGAGGTCACCGGTTCGAACCCG 4293 Query 165318 GTTGG 165322 ||||| Sbjct 4294 GTTGG 4298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057434001778250