Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq25817 98.7 2e-15
seq22893 98.7 2e-15
seq22516 98.7 2e-15
seq22508 98.7 2e-15
seq21172 98.7 2e-15
seq20845 98.7 2e-15
seq20757 98.7 2e-15
seq19684 98.7 2e-15
seq15593 98.7 2e-15
seq14405 98.7 2e-15
seq13829 98.7 2e-15
seq10684 98.7 2e-15
seq6944 98.7 2e-15
seq18099 86.0 1e-11
seq6448 86.0 1e-11
seq18539 84.2 5e-11
seq2826 84.2 5e-11
>seq25817
Length=36442
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 10378 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 10319
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 10318 CCCACGGTGGGC 10307
>seq22893
Length=62586
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 57667 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 57726
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 57727 CCCACGGTGGGC 57738
>seq22516
Length=82561
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 63107 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 63048
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 63047 CCCACGGTGGGC 63036
>seq22508
Length=16261
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 8467 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8408
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 8407 CCCACGGTGGGC 8396
>seq21172
Length=21299
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 19764 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 19705
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 19704 CCCACGGTGGGC 19693
>seq20845
Length=109154
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 98851 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 98792
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 98791 CCCACGGTGGGC 98780
>seq20757
Length=7935
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 1334 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1393
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1394 CCCACGGTGGGC 1405
>seq19684
Length=100171
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 49688 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 49747
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 49748 CCCACGGTGGGC 49759
>seq15593
Length=70921
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 33754 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 33695
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 33694 CCCACGGTGGGC 33683
>seq14405
Length=20136
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 2769 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2828
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 2829 CCCACGGTGGGC 2840
>seq13829
Length=14302
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 2092 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2033
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 2032 CCCACGGTGGGC 2021
>seq10684
Length=16725
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 11137 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 11078
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 11077 CCCACGGTGGGC 11066
>seq6944
Length=61004
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 57214 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 57273
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 57274 CCCACGGTGGGC 57285
>seq18099
Length=159039
Score = 86.0 bits (94), Expect = 1e-11
Identities = 143/204 (70%), Gaps = 11/204 (5%)
Strand=Plus/Plus
Query 229750 TTCTCTGCGTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCA 229809
|||| | ||| || || || || || | || ||||| ||||||||||| || | |||
Sbjct 20072 TTCTGTATGTTTCCGATTCACTACCCACAGATCTGGGAAATGTACAAGAAAGCCGAAGCA 20131
Query 229810 ACTTTCTGGACCACTGAGGAAGT---TC-CTCTGAACGCAGACGTCGTCGACTGGCGTGA 229865
| ||||||||| | || ||||| || ||| || || ||| |||||| ||
Sbjct 20132 TCCTTCTGGACCGCCGAAGAAGTCGATCTCTCACAAGACAACCGT----GACTGG---GA 20184
Query 229866 GAAACTCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTC 229925
|| ||||| |||| |||||||| |||||||||||| | || | ||| ||||| | ||
Sbjct 20185 AAATCTCAACGACGGAGAACGTCACTTCATCAAACACGTACTCGCTTTCTTCGCCGCATC 20244
Query 229926 CGATGGTATTGTGATGGAAAATCT 229949
|| || || || | ||||| ||
Sbjct 20245 TGACGGAATCGTACTCGAAAACCT 20268
>seq6448
Length=76080
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACGA 165776
||||||||| |||||||||| || || |||| || ||||||||||||||||||||||||
Sbjct 65123 TAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGG 65182
Query 165777 TGGGC 165781
|||||
Sbjct 65183 TGGGC 65187
>seq18539
Length=48280
Score = 84.2 bits (92), Expect = 5e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand=Plus/Minus
Query 165258 CCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCACCGGTTCGAACCCG 165317
|||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||
Sbjct 21546 CCATAGCTCAGTGG--TAGAGCATTCGACTGCAGATCGAGAGGTCACCGGTTCGAACCCG 21489
Query 165318 GTTGG 165322
|||||
Sbjct 21488 GTTGG 21484
>seq2826
Length=7991
Score = 84.2 bits (92), Expect = 5e-11
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand=Plus/Plus
Query 165258 CCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCACCGGTTCGAACCCG 165317
|||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||
Sbjct 4236 CCATAGCTCAGTGG--TAGAGCATTCGACTGCAGATCGAGAGGTCACCGGTTCGAACCCG 4293
Query 165318 GTTGG 165322
|||||
Sbjct 4294 GTTGG 4298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057434001778250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |