Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2366 141 2e-28
seq13163 118 2e-21
>seq2366
Length=14026
Score = 141 bits (156), Expect = 2e-28
Identities = 152/198 (77%), Gaps = 5/198 (3%)
Strand=Plus/Minus
Query 35518 AGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACC 35576
|||| ||||| |||||| || |||| || ||| |||| ||||||||| |||||| | |
Sbjct 9768 AGAACAATCCTGATGATCGACGGATTATAATGTCGGCTTGGAATCCTCCTGATCTTAAAC 9709
Query 35577 TTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGT 35636
| ||||| ||||||||||||||| || | | || |||||||| || ||||||||| | |
Sbjct 9708 TGATGGCCCTTCCTCCATGCCACTTGTTTTCACAGTTTTATGTTGCGAATGGAGAACTTT 9649
Query 35637 CGTGCCAGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694
| || || |||||||||| ||| || ||| || | || || || || || |||||
Sbjct 9648 CATGTCAAATGTATCAGCGCTCAGCCGATATG--GGTCTCGGTGTACCATTTAACATTGC 9591
Query 35695 ATCATACTCTCTTCTGAC 35712
|||||||||||||| ||
Sbjct 9590 CTCATACTCTCTTCTTAC 9573
>seq13163
Length=108863
Score = 118 bits (130), Expect = 2e-21
Identities = 178/251 (71%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAAT 35524
||||||||||| | || |||||||| | || || || | | | | | | | |||
Sbjct 36475 GATTATACTGGTCAAGGATTTGATCAACTCGCAGATGTAATCGACAAGATCAAAAACAAT 36534
Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584
|| |||||| | | || || | |||| ||||||||| |||||| | | |||||
Sbjct 36535 CCTGATGATCGGCGCATTATATTATCGGCTTGGAATCCTTCTGATCTTAAGTTGATGGCA 36594
Query 35585 CTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAG 35644
|||||||||||||||||| ||| || || ||||| || | || || | || || ||
Sbjct 36595 CTTCCTCCATGCCACATGTTTGCACAGTTCTATGTTGCAGAAGGGGAGCTCTCATGTCAA 36654
Query 35645 TTGTATCAGCG--AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACT 35702
|||||||||| |||||| ||| || | || ||||| || || ||||| || ||||
Sbjct 36655 ATGTATCAGCGTTCAGCGGATATG--GGTCTTGGTGTGCCGTTTAACATTGCTTCCTACT 36712
Query 35703 CTCTTCTGACT 35713
||||||| |||
Sbjct 36713 CTCTTCTTACT 36723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989219160480125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |