Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2366 141 2e-28 seq13163 118 2e-21 >seq2366 Length=14026 Score = 141 bits (156), Expect = 2e-28 Identities = 152/198 (77%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 35518 AGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACC 35576 |||| ||||| |||||| || |||| || ||| |||| ||||||||| |||||| | | Sbjct 9768 AGAACAATCCTGATGATCGACGGATTATAATGTCGGCTTGGAATCCTCCTGATCTTAAAC 9709 Query 35577 TTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGT 35636 | ||||| ||||||||||||||| || | | || |||||||| || ||||||||| | | Sbjct 9708 TGATGGCCCTTCCTCCATGCCACTTGTTTTCACAGTTTTATGTTGCGAATGGAGAACTTT 9649 Query 35637 CGTGCCAGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 | || || |||||||||| ||| || ||| || | || || || || || ||||| Sbjct 9648 CATGTCAAATGTATCAGCGCTCAGCCGATATG--GGTCTCGGTGTACCATTTAACATTGC 9591 Query 35695 ATCATACTCTCTTCTGAC 35712 |||||||||||||| || Sbjct 9590 CTCATACTCTCTTCTTAC 9573 >seq13163 Length=108863 Score = 118 bits (130), Expect = 2e-21 Identities = 178/251 (71%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAAT 35524 ||||||||||| | || |||||||| | || || || | | | | | | | ||| Sbjct 36475 GATTATACTGGTCAAGGATTTGATCAACTCGCAGATGTAATCGACAAGATCAAAAACAAT 36534 Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584 || |||||| | | || || | |||| ||||||||| |||||| | | ||||| Sbjct 36535 CCTGATGATCGGCGCATTATATTATCGGCTTGGAATCCTTCTGATCTTAAGTTGATGGCA 36594 Query 35585 CTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAG 35644 |||||||||||||||||| ||| || || ||||| || | || || | || || || Sbjct 36595 CTTCCTCCATGCCACATGTTTGCACAGTTCTATGTTGCAGAAGGGGAGCTCTCATGTCAA 36654 Query 35645 TTGTATCAGCG--AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACT 35702 |||||||||| |||||| ||| || | || ||||| || || ||||| || |||| Sbjct 36655 ATGTATCAGCGTTCAGCGGATATG--GGTCTTGGTGTGCCGTTTAACATTGCTTCCTACT 36712 Query 35703 CTCTTCTGACT 35713 ||||||| ||| Sbjct 36713 CTCTTCTTACT 36723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989219160480125