Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2366 87.8 3e-12
seq1742 86.0 9e-12
>seq2366
Length=14026
Score = 87.8 bits (96), Expect = 3e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 70185 TCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGC 70244
|||||| |||||| ||| | |||| |||||| | ||||||||| | ||| |
Sbjct 9771 TCAAGAACAATCCTGATGATCGACGGATTATAATGTCGGCTTGGAATCCTCCTGATCTTA 9712
Query 70245 ACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGA-TGGCAAA 70303
| | ||||| || || || || |||| || | |||||||| | | ||| ||| ||
Sbjct 9711 AACTGATGGCCCTTCCTCCATGCCACTTGTTTTCACAGTTTTA-TGTTGCGAATGGAGAA 9653
Query 70304 TTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATT 70363
| ||||| |||||||||| | ||||| ||||| ||||||||||| |||||||||
Sbjct 9652 CTTTCATGTCAAATGTATCAGCGCTCAGCCGATATGGGTCTCGGTGTACCATTTAACATT 9593
Query 70364 GC 70365
||
Sbjct 9592 GC 9591
>seq1742
Length=31261
Score = 86.0 bits (94), Expect = 9e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 125478 GCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTT 125537
|||||||| ||||| |||||| | || || ||||| || |||| |||||| ||
Sbjct 28038 GCCATCTTCTGGCTTAAGAAGAGAGGTCTTATGCCGGGTTTGACCTTTTCAAACGAGCTT 28097
Query 125538 ATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
|||||| ||||||||||||| ||||||||||||||
Sbjct 28098 ATATCTAGAGACGAGGGCCTCCACTGTGACTTTGC 28132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740792650269000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |