Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_006565.1 Length=131522 Score E Sequences producing significant alignments: (Bits) Value seq7810 89.7 4e-13 >seq7810 Length=38048 Score = 89.7 bits (98), Expect = 4e-13 Identities = 192/283 (68%), Gaps = 22/283 (8%) Strand=Plus/Plus Query 34970 GCATTAACATCCCTATCATGATGGGTACCACATTTATAACATGTCCATTCACGAATTTCT 35029 || |||| |||||||||||| || |||| ||| | ||| ||||||||| | | | Sbjct 14093 GCGTTAATATCCCTATCATGGTGTGTACGACAAGAAGGACAGTCCCATTCACGTAGGTTT 14152 Query 35030 AGAGGCTTCTTACC------ACTGTGATAGCCACAACTAGAGCATATTTGT---GAAGTA 35080 ||| || ||| | | | ||||| ||||||| ||| |||| ||| |||| | Sbjct 14153 AGA---TTTTTAACGTCTTTATTTTGATATCCACAACAAGAACATAATTGGCTGGAAGCA 14209 Query 35081 TAG---TTCGGTTTAACAACAATTAATTGTTTACCATACCACTTACATTTATACTCCAAT 35137 | |||| | || ||||| | |||||| |||||||| || |||||| ||||| Sbjct 14210 AATGTTTTCGAT---ACGACAATGACTTGTTTGCCATACCATTTTGCTTTATATTCCAAC 14266 Query 35138 ATAGTCCTGAACTCTCTCCATGATTGATTACTAATAGACTTAGCTAAATGATGATTCTTT 35197 || || | |||| | ||| ||| | |||||| | || ||||| | |||||||||| Sbjct 14267 ATGGTTCGAAACTGTGACCAAGATACTTCACTAATTGCTTTTGCTAACTTATGATTCTTT 14326 Query 35198 AGAAGATTCTTGGTTCT--CAAATCTTCCATTGCAATCACATC 35238 | | |||| | | || |||||| || || | || ||||| Sbjct 14327 AACATATTC--GATACTTGCAAATCCTCTATACCGATAACATC 14367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420598046490325