Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 504 1e-137
>seq11714
Length=14353
Score = 504 bits (558), Expect = 1e-137
Identities = 682/945 (72%), Gaps = 4/945 (0%)
Strand=Plus/Minus
Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATC 211668
|||| |||||||||||| | |||||||| | ||| | | | ||||| | |||||
Sbjct 1389 TTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCCGTTTTTATT 1331
Query 211669 GTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGT 211728
| |||||||| || || ||||| || ||||| || || || |||||||| || ||||
Sbjct 1330 ATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 1271
Query 211729 TCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATC 211788
|| | | || || ||||| || || || ||||| || |||| |||| || ||
Sbjct 1270 TCTCTTCTTTACGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATT 1211
Query 211789 GGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGT 211848
||||| || || || || ||||||||||| ||| | ||||||| ||||| ||||| ||
Sbjct 1210 GGTTTGCATTTTTACCCAATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGC 1151
Query 211849 GGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGA 211908
|||||||| | | | | | ||||| | | || | | || ||||| |
Sbjct 1150 GGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGT 1091
Query 211909 CAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCA 211968
||||||||||| | |||| | ||||||||||||||||| |||||| ||||||||
Sbjct 1090 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 1031
Query 211969 CCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCA 212028
||||| |||| || ||||| ||| | | |||||| | ||||| || || ||
Sbjct 1030 CCTGTTGCAGCTGCAACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCT 971
Query 212029 GACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAA 212088
|| ||||||||| |||| || || || || |||||||| ||| | |||||||| || ||
Sbjct 970 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAG 911
Query 212089 CATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCA 212148
|| ||||| |||||||||||||| || ||| ||| || || ||| | ||||| || |
Sbjct 910 CACAACATTCTTATGCACCCATTTCACATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCC 851
Query 212149 TTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGT 212208
|||| ||||||||| ||||| | || || ||| | ||| | |||||||| |
Sbjct 850 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAA 791
Query 212209 TTAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTT 212268
|| || || | ||||||| ||||||||||||||||| || |||||||| ||
Sbjct 790 AATGAATCTGCTAATGAAGGTTACAGATTCGGACAAGAAGAAGAAACTTATAACATTGTA 731
Query 212269 GCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGA 212328
||||| ||||| || || || || | ||||| || ||||| |||||||| |
Sbjct 730 GCTGCTCATGGTTATTTTGGCCGATTGATCTTTCAATATGCTAGTTTCAACAATTCTCGT 671
Query 212329 AGTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGT 212388
|||||| |||||| | || | ||||| || | || | ||||| || || | |||
Sbjct 670 TCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGT 611
Query 212389 ATCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCA 212448
|| |||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||
Sbjct 610 ATTAGCACCATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAG- 552
Query 212449 TCAGGTAAG-GTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGA 212507
||| | | | ||| || |||||||| |||| || ||||| | || ||||||||||||||
Sbjct 551 TCAAGGACGCGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGA 492
Query 212508 AGTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552
||||||||| ||| | ||||| ||||||||||| || ||| ||||
Sbjct 491 AGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807264732489000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |