Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_007458.1
Length=37253
Score E
Sequences producing significant alignments: (Bits) Value
seq7810 452 9e-123
>seq7810
Length=38048
Score = 452 bits (500), Expect = 9e-123
Identities = 361/433 (83%), Gaps = 4/433 (1%)
Strand=Plus/Plus
Query 31992 CTAGCTTTCTTATTATATGTAAAAAGTCATATGTTTTTTATCTTCTTTATAGTACTCTAA 32051
|||||||| |||| | ||||||||||||||| ||||||||||||||||| || | |||
Sbjct 365 CTAGCTTTTTTATCA---GTAAAAAGTCATATGCTTTTTATCTTCTTTATAATATTGTAA 421
Query 32052 CCGGTTTTGCAAAGTGCCAGTGTGGAACTCAAACTTATGGCCATCTGGATCTGTAAAGTA 32111
|| | ||| ||||| ||||| || ||||||||||| || ||||| ||||||||||| ||
Sbjct 422 ACGATCTTGTAAAGTACCAGTATGAAACTCAAACTTGTGCCCATCGGGATCTGTAAAATA 481
Query 32112 AAGAGATCTTTGGTCTCTCTCATCTCTTTCTCGGCCAGGTAAAATATTAACATCATTTTG 32171
|| ||| | || |||| |||||||||||||| |||||||| |||||||||| ||||||
Sbjct 482 AATAGACCGTTTATCTCGGTCATCTCTTTCTCGTCCAGGTAAGATATTAACATGATTTTG 541
Query 32172 AATTAATACTTCTTTTAAATGGTCTAATGCTTCATTAGTTACAGTGAAAGCCATATGTGT 32231
|||||||| |||||||||| || || | | ||| |||||||||||||| ||||||||
Sbjct 542 AATTAATATTTCTTTTAAAGAATCAAACTCATTATTTGTTACAGTGAAAGCTATATGTGT 601
Query 32232 ATAAGATTGCTTAATTTCATTTCTTGGTATATCTTCTTCAACATTTAAAGCAATCCATAA 32291
||||| | || ||||||||||||||||||| |||||| ||||||| ||||||||||||
Sbjct 602 GTAAGAGTACTGAATTTCATTTCTTGGTATACTTTCTTCCACATTTAGAGCAATCCATAA 661
Query 32292 TCCATTTAAATCAAAATACGCTAATTTTCTACCTTTTACTAATAATTTTGCTTGAAGTAt 32351
||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct 662 ACCATTTAAATCAAAATAAGCTAACTTTCTACCTTTTACTAATAATTTCGCTTGAAGTA- 720
Query 32352 ttttttGATAGAATTCAATAGATTTTTCCAAGTTTGATACAGAAAAACAAATATGGTTAA 32411
| |||||||| || ||||||| || || | ||| || ||||||||||| |||||||
Sbjct 721 TATTTTGATAAAACTCAATAGCCTTCTCTAGATTTATAACTGAAAAACAAATGTGGTTAA 780
Query 32412 TGCCCTGTAGCAT 32424
| | |||| |||
Sbjct 781 TACTTTGTATCAT 793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119047307258250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |