Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq16226 95.1 1e-14
seq24711 89.7 4e-13
>seq16226
Length=39664
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| ||||||||||| || |||||||||| ||||| ||| ||||| ||| | |
Sbjct 12048 ATGCAGATTTTTGTCAAGACCTTGACCGGCAAGACCATCACCTTGGAAGTTGAAAGCTCC 11989
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | ||| | | || || || || |||||||| || |||| || ||
Sbjct 11988 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 11929
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| || | || | || || || ||| | ||||| || |||| |||| || || |||
Sbjct 11928 CAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGACGGTAGAACTCTGGCGGACTACAAT 11869
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| || ||||| || || || || || ||||||||||| || |||||
Sbjct 11868 ATCCAGAAAGAGTCCACTCTCCACTTGGTGTTGCGTCTTCGTGGTGG 11822
>seq24711
Length=27656
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| || ||||| || || |||| ||||| || ||||| ||||| ||| | |
Sbjct 4652 ATGCAGATCTTTGTTAAGACCTTGACGGGCAAGACTATTACTTTGGAAGTTGAAAGCTCC 4711
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| || ||| | | || || || ||| |||||||| || |||| || ||
Sbjct 4712 GACACTATTGACAATGTGAAGGCCAAGATTCAAGACAAAGAGGGTATTCCTCCGGACCAG 4771
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| || | || | ||| || || || | ||||| | |||| |||| ||||| ||
Sbjct 4772 CAGAGATTGATCTTTGCTGGTAAGCAGCTTGAAGACGGCAGAACTTTGGCTGATTACAAC 4831
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| || ||||| ||||| || ||||| ||||||||||| || |||||
Sbjct 4832 ATCCAGAAAGAGTCTACTCTTCATTTGGTGTTGCGTCTACGTGGTGG 4878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422891641855000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |