Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq18044 134 1e-26
seq5576 134 1e-26
seq4225 122 7e-23
seq14351 114 1e-20
seq27144 111 1e-19
seq24711 109 5e-19
seq7697 109 5e-19
seq18065 107 2e-18
seq16226 105 6e-18
seq17640 104 2e-17
seq8442 100 2e-16
seq28288 86.0 5e-12
>seq18044
Length=6213
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || ||||| || ||| | || |||||||| | || || ||||| || | | |
Sbjct 3305 GATGCAGATATTTGTCAAGACTCTTACTGGTAAAACAATTACCCTAGAAGTCGAGAGCTC 3246
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | ||| || | ||| ||||||||||||||||| || || || || || ||
Sbjct 3245 AGACACCATTGACAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCGGACCA 3186
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | || || |||||||| |||||| | |||||| || ||| | | ||||||||
Sbjct 3185 GCAGAGGCTGATCTTTGCCGGTAAACAGCTCGAGGATGGTCGAACCCTTGCAGATTACAA 3126
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||| || ||||| ||| | ||||| ||| | | ||| | || |||
Sbjct 3125 CATTCAGAAGGAATCAACCCTGCATTTGGTTCTCAGGTTGAGAGGTGGT 3077
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| ||| | || || || || | || ||||| || |||| |
Sbjct 3532 ATGCAGATCTTTGTTAAGACTCTTACTGGCAAGACCATAACCCTTGAGGTCGAAAGTTCA 3473
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || ||||| ||||| || || || || || ||
Sbjct 3472 GACACCATTGACAACGTCAAGGCCAAGATCCAAGATAAGGAAGGAATCCCTCCGGACCAG 3413
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || |||||| | |||||| ||| ||| | | |||||||||
Sbjct 3412 CAGAGACTGATTTTTGCTGGTAAACAGCTTGAGGATGGCCGTACCTTGGCTGATTACAAC 3353
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || ||||| ||| | ||| | || || || | || || ||
Sbjct 3352 ATCCAGAAGGAATCAACCCTTCATCTCGTGCTGAGACTCCGTGGTGG 3306
>seq5576
Length=16168
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||| || || |||||| | || || || || | || ||||| || |||| | |
Sbjct 1482 GATGCAAATCTTCGTGAAAACTCTTACGGGCAAGACCATAACACTTGAGGTCGAAAGCTC 1423
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| ||||| || | |||| || || |||||||| || || || || || || ||
Sbjct 1422 CGACACCGTAGAAAACGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCTCCGGACCA 1363
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | ||||| |||||||| |||||| | ||||| ||| ||| | | ||||||||
Sbjct 1362 ACAAAGGCTTATCTTTGCCGGTAAACAGCTCGAGGACGGCCGTACCTTGGCTGATTACAA 1303
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||| ||||| || || || | || || ||| |||| ||| | ||||||
Sbjct 1302 CATCCAAAAGGAGTCAACTCTCCACTTGGTTCTGCGTTTGAGAGGAGGT 1254
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||| ||||| ||||| ||||| || ||||| | || | ||||| || | | |
Sbjct 1026 GATGCAAATCTTTGTGAAAACCTTAACTGGCAAAACCATTACCTTAGAAGTTGAGAGCTC 967
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | ||| | |||| || |||||||||||||| || || | || || ||
Sbjct 966 AGACACCATCGACAACGTCAAGGCCAAGATTCAAGACAAGGAAGGGATCACTCCGGACCA 907
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| | || || || || || |||||| | |||||| ||||| | | ||||||||
Sbjct 906 ACAGAGACTGATCTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTTGCGGATTACAA 847
Query 22398 CATTCAAAAAGAATCCAC 22415
|| ||||| || || ||
Sbjct 846 TATCCAAAAGGAGTCTAC 829
>seq4225
Length=52512
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| |||| || || || | || || || || ||| | |
Sbjct 2961 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTCG 2902
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | ||| || |||||||||||||| || |||||||| || ||
Sbjct 2901 GACACAATCGACAATGTGAAAGCGAAGATTCAAGACAAGGAAGGAATTCCACCGGACCAG 2842
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || |||||||| ||||| ||||| || | || || | |||||||||
Sbjct 2841 CAACGTTTGATCTTTGCCGGTAAACAATTAGAAGACGGAAGAACACTCGCTGATTACAAC 2782
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || |||||||| || | ||||| ||| | ||||| | |||||
Sbjct 2781 ATCCAGAAAGAATCAACGCTTCATTTGGTTCTACGATTAAGAGGAGG 2735
>seq14351
Length=15190
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || | ||| || ||||| || |||||||| ||||||||||||| |||| | |
Sbjct 4617 GATGCAGATATCTGTCAAGACTTTGACGGGTAAAACCATCACTCTTGAAGTCGAAAGCTC 4676
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || | || || ||||| |||||||| || || ||||| || ||
Sbjct 4677 GGATACGATTGATAATGTGAAGGCGAAGATTCAGGACAAGGAAGGGATCCCACCGGACCA 4736
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| | || || || || || |||||| | |||||| || || | | || |||||
Sbjct 4737 ACAGAGACTAATCTTCGCTGGTAAACAGCTCGAGGATGGTCGGACATTAGCTGACTACAA 4796
Query 22398 CATTCAAAAAGAATCCAC 22415
|||||| ||||| || ||
Sbjct 4797 CATTCAGAAAGAGTCAAC 4814
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||| ||||| || ||| | || || || || | |||||||| || |||| | |
Sbjct 3935 GATGCAAATCTTTGTAAAGACTCTTACAGGCAAGACCATAACTCTTGAGGTCGAAAGCTC 3994
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| || | ||| | |||| || |||||||| || || || || || || || ||
Sbjct 3995 CGACACAATTGACAGTGTCAAGGCTAAGATTCAAGATAAAGAAGGAATCCCTCCGGACCA 4054
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || |||||||| |||||| | |||||| ||| || | | ||||||||
Sbjct 4055 GCAGAGGTTGATCTTTGCCGGTAAACAGCTCGAGGATGGCCGTACTCTTGCTGATTACAA 4114
Query 22398 CATTCAAAAAGAATCCAC 22415
||| || || || || ||
Sbjct 4115 CATCCAGAAGGAGTCAAC 4132
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || ||||| || | || ||||| || |||| |
Sbjct 4164 ATGCAGATCTTTGTCAAGACTCTTACTGGTAAGACCATAACCCTTGAGGTCGAAAGTTCA 4223
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| || || ||||| ||||| || ||||| || || ||
Sbjct 4224 GACACCATTGATAACGTCAAGGCCAAGATCCAAGATAAGGAAGGAATTCCTCCGGACCAG 4283
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || ||| | || ||| || || | | |||||||||
Sbjct 4284 CAAAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTCTAGCGGATTACAAC 4343
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||||| ||| | | ||| | ||||||
Sbjct 4344 ATCCAGAAGGAGTCAACTCTCCATTTGGTTCTCAGGTTGAGAGGAGGT 4391
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||| | || ||||| || || | || |||||||| | || || ||||| || | | |
Sbjct 4392 ATGTAGATCTTTGTCAAGACACTCACGGGTAAAACCATTACCCTAGAAGTCGAGAGCTCA 4451
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | ||| ||| ||||||||||||| || || || || || |||
Sbjct 4452 GACACCATTGACAATGTTAAAGCTAAA-TTCAAGACAAGGAAGGGATCCCTCCGGACCAA 4510
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||| | || ||||| | |||||| || || | | ||||| |||
Sbjct 4511 CAGAGGCTCATCTTT-CTGGAAAACAACTTGAGGATGGTCGAACTCTTGCTGATTATAAC 4569
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || ||||| ||
Sbjct 4570 ATTCAGAAGGAATCAAC 4586
>seq27144
Length=112545
Score = 111 bits (122), Expect = 1e-19
Identities = 145/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||||||||| || || || ||||| |||| || || ||| ||||||| || || ||| |
Sbjct 90502 AAAGATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATCACTCTCGAGGTTGAATC 90443
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || ||| | ||| || |||| || || ||||||||||| || || ||||| ||
Sbjct 90442 ATCGGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCGGA 90383
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||||||||| | || || ||||| ||||| | || || || || || | || ||
Sbjct 90382 TCAACAACGATTAATCTTCGCCGGAAAACAACTCGAAGACGGACGTACTCTCGCTGACTA 90323
Query 22395 CAACATTCAAAAAGAATCCAC 22415
|||||| || || ||||| ||
Sbjct 90322 CAACATCCAGAAGGAATCAAC 90302
>seq24711
Length=27656
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| ||||| || || ||||| || || |||||||||| ||||| | | |
Sbjct 5108 ATGCAGATTTTCGTTAAGACCTTGACCGGGAAGACAATCACTCTTGAGGTGGAGAGCTCA 5167
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || || || ||||||||||| || ||||| || ||
Sbjct 5168 GACACAATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAG 5227
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| || || ||| | |||||| || || | | || |||||
Sbjct 5228 CAGCGTCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGTCGGACTTTGGCTGACTACAAT 5287
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||||| |||| || || ||||| | || || |||
Sbjct 5288 ATCCAGAAGGAGTCCACATTACACTTGGTGTTGCGTCTCCGTGGTGGT 5335
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| || || || || || || | ||| | ||||| |||| | ||
Sbjct 4652 ATGCAGATCTTTGTTAAGACCTTGACGGGCAAGACTATTACTTTGGAAGTTGAAAGCTCC 4711
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||||||||| ||||||||||| || || ||
Sbjct 4712 GACACTATTGACAATGTGAAGGCCAAGATTCAAGACAAAGAGGGTATTCCTCCGGACCAG 4771
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || || ||| | || || | | || | | |||||||||
Sbjct 4772 CAGAGATTGATCTTTGCTGGTAAGCAGCTTGAAGACGGCAGAACTTTGGCTGATTACAAC 4831
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||||| || || | ||||| || ||||| | || || |||
Sbjct 4832 ATCCAGAAAGAGTCTACTCTTCATTTGGTGTTGCGTCTACGTGGTGGT 4879
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||| | || || || || |||| |||||||| || | | |
Sbjct 5336 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACAATCACACTTGAAGTTGAGAGCTCT 5395
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | | || || || || || ||||| ||||||||||| || ||
Sbjct 5396 GATACTATTGATAACGTGAAGGCCAAGATCCAGGATAAGGAAGGTATTCCACCGGACCAG 5455
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || || ||| | |||||| || || | | |||||||||
Sbjct 5456 CAGCGTCTAATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGTACACTGGCGGATTACAAC 5515
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448
||||| ||||| || ||| | || || || | || | || || |||||
Sbjct 5516 ATTCAGAAAGAGTCAACCCTCCACTTGGTCCTCCGTCTCCGTGGTGGTTT 5565
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| || || || ||||| || | || || || ||||| | |
Sbjct 4880 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTGGAGAGTTCT 4939
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || ||| || ||||| ||||| ||||||||||| || ||
Sbjct 4940 GACACTATTGACAACGTGAAGGCAAAGATCCAAGATAAGGAAGGTATTCCACCGGACCAG 4999
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || ||| | |||||| || ||| | | || |||||
Sbjct 5000 CAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACCTTGGCTGACTACAAT 5059
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || || | || || || ||||| | || || |||
Sbjct 5060 ATCCAAAAGGAGTCTACATTGCACTTGGTGTTGCGTCTTCGTGGTGGT 5107
>seq7697
Length=17472
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||||| ||||| || || | |||||||| ||||| | | ||
Sbjct 10875 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACCATTACTCTTGAGGTGGAGAGCTCC 10816
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | ||| || || ||||||||||| |||||||| || |||||
Sbjct 10815 GACACTATTGACAATGTGAAAGCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGATCAG 10756
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| || || || || || | || ||| | || | | |||||||||
Sbjct 10755 CAGAGGCTTATCTTCGCTGGTAAGCAACTTGAAGATGGGAGAACTCTTGCGGATTACAAC 10696
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||||| ||||| | || | || ||||| | || || |||
Sbjct 10695 ATCCAGAAAGAGTCCACTCTCCACCTTGTCTTGCGTCTTCGTGGTGGT 10648
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || || | ||||||||||| ||||| | || ||||| | | |
Sbjct 10419 ATGCAGATTTTTGTGAAGACCCTTACCGGTAAAACAATCACTTTGGAGGTGGAGAGCTCT 10360
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | |||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 10359 GACACTATTGATAACGTCAAGGCTAAGATTCAGGACAAAGAGGGAATCCCACCAGACCAG 10300
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| |||||||| || ||| |||| || |||||| | | || || |||
Sbjct 10299 CAGAGACTTATCTTTGCCGGTAAGCAGCTAGAAGACGGACGCACCCTAGCAGACTATAAC 10240
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 10239 ATCCAGAAGGAGTCTAC 10223
>seq18065
Length=21122
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||| ||||| || ||| | || || || || | || ||||| || |||| | |
Sbjct 12178 GATGCAAATCTTTGTAAAGACTCTTACAGGCAAGACCATAACACTTGACGTTGAAAGCTC 12237
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| || | ||| || | || ||| |||||||||||||| || || | || |||||
Sbjct 12238 CGACACAATAGACAATGTAAAGGCAAAGATTCAAGACAAGGAAGGAATCCATCCGGATCA 12297
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| | || || |||||||| ||||| | || ||| ||| || | | || |||||
Sbjct 12298 ACAGAGGCTCATCTTTGCCGGAAAACAACTTGAAGATGGCCGTACTCTTGCAGACTACAA 12357
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||| || || || || || | ||||| ||| | | ||| | || |||
Sbjct 12358 CATCCAGAAGGAGTCAACTCTCCATTTGGTTCTCAGGTTGAGAGGTGGT 12406
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||||||||| | || || ||||| || | | |
Sbjct 12407 ATGCAGATATTTGTCAAGACGCTTACCGGTAAAACCATTACCCTAGAAGTTGAGAGCTCA 12466
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
| ||| | ||| || | || | |||||||| || || || || || || || ||
Sbjct 12467 TACACCATTGACAATGTTAAGGCGGAGATTCAAGATAAAGAAGGGATCCCTCCGGACCAG 12526
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| |||||||| |||||| | |||||| || || | | ||||| |||
Sbjct 12527 CAGAGACTTATCTTTGCCGGTAAACAGCTCGAGGATGGTCGGACTTTAGCGGATTATAAC 12586
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|||| ||||||||| ||| | ||||| ||
Sbjct 12587 ATTCTAAAAGAATCAACCCTTCATTTGGT 12615
Score = 84.2 bits (92), Expect = 2e-11
Identities = 137/197 (70%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||||||||| || | ||||| |||| | ||| | ||||| || | |
Sbjct 12635 ATGCAAATTTTTGTTAAGACCCTTACCGGCCAAACCATAACTTTGGAAGTTGAGAGTTCA 12694
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
| || | ||| || | ||| || |||||||||||||| || || || || |||
Sbjct 12695 TACACAATTGACAATGTTAAAGCTAAGATTCAAGACAAGGA----ATCCCTCCGGACCAA 12750
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| ||||| | |||||| || || | | || ||||||
Sbjct 12751 CAGAGGTTAATCTTTGCCGGAAAACAACTTGAGGATGGTCGAACTTTAGCGGACTACAAC 12810
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| ||||| || ||
Sbjct 12811 ATTCAGAAAGAGTCAAC 12827
>seq16226
Length=39664
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || ||||| ||||| || | || || || ||||| | | |
Sbjct 11592 ATGCAGATCTTTGTCAAGACCTTAACTGGTAAGACTATTACCCTCGAGGTGGAGAGCTCA 11533
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| ||||| |||||||||||||| || ||||| || ||
Sbjct 11532 GACACCATCGACAACGTCAAGGCCAAAATCCAAGACAAGGAGGGAATCCCACCGGACCAG 11473
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || || ||| | || ||| ||||| | | || ||||||
Sbjct 11472 CAAAGGTTGATCTTCGCTGGAAAGCAGCTTGAAGATGGTCGCACTCTTGCTGACTACAAC 11413
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||||| | || || || ||||| | || ||||||
Sbjct 11412 ATCCAGAAGGAGTCCACACTTCACTTGGTGTTGCGTCTACGTGGAGGT 11365
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || || ||||| || | || ||||| || || | | |
Sbjct 11364 ATGCAAATCTTCGTGAAGACCTTGACTGGTAAGACCATTACCCTTGAGGTTGAGAGCTCA 11305
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || || || ||||| || ||||| || || || ||
Sbjct 11304 GACACTATTGACAACGTCAAGGCCAAGATCCAGGACAAAGAAGGTATCCCTCCGGACCAG 11245
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| || || ||| | |||||| || ||| | |||| ||||||
Sbjct 11244 CAGCGTCTCATTTTTGCTGGAAAGCAGCTTGAGGATGGTCGTACCTTAGCCGACTACAAC 11185
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || ||| | || || || ||||| | || || |||
Sbjct 11184 ATTCAGAAGGAGTCGACCCTTCACTTGGTCTTGCGTCTTCGTGGTGGT 11137
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || || ||||| || | ||||| || || || | | |
Sbjct 11820 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATTACTCTCGAGGTTGAGAGCTCA 11761
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | ||| || ||||||||||| ||||||||||| || || ||
Sbjct 11760 GACACCATCGACAACGTGAAAGCCAAGATTCAAGACAAAGAGGGTATTCCTCCGGACCAG 11701
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || ||| | |||||| || || | | || ||||||
Sbjct 11700 CAGAGGTTGATCTTTGCCGGGAAGCAGCTTGAGGATGGTCGTACTCTTGCAGACTACAAC 11641
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | || || || ||||| | || || |||
Sbjct 11640 ATCCAGAAGGAGTCTACTCTCCACTTGGTGTTGCGTCTTCGTGGTGGT 11593
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || || || ||||| || || |||| | ||||| |||| | ||
Sbjct 12048 ATGCAGATTTTTGTCAAGACCTTGACCGGCAAGACCATCACCTTGGAAGTTGAAAGCTCC 11989
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || ||||| ||||||||||| || || ||
Sbjct 11988 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 11929
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || ||||| || || | || || | || | | || |||||
Sbjct 11928 CAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGACGGTAGAACTCTGGCGGACTACAAT 11869
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||||| ||||| | || || || ||||| | || || |||
Sbjct 11868 ATCCAGAAAGAGTCCACTCTCCACTTGGTGTTGCGTCTTCGTGGTGGT 11821
>seq17640
Length=82317
Score = 104 bits (114), Expect = 2e-17
Identities = 144/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273
|| ||||||| || || || ||||| |||| || || || ||||||| || || |||
Sbjct 53141 TAGAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACTCTCGAGGTTGAAT 53200
Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333
| | |||||| | ||| || ||||| || || ||||||||||| || || ||||| |
Sbjct 53201 CATCTGATACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATCCCACCGG 53260
Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393
| || |||||| | || || || || ||||| | || || || || || | || |
Sbjct 53261 ACCAGCAACGTTTAATCTTCGCTGGAAAACAACTCGAAGACGGACGTACTCTCGCTGACT 53320
Query 22394 ACAACATTCAAAAAGAATCCAC 22415
||||||| || || ||||| ||
Sbjct 53321 ACAACATCCAGAAGGAATCAAC 53342
>seq8442
Length=60656
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||| |||||||| ||| | || || || || | || |||||||| |||| | |
Sbjct 44260 GATGCAAATCTTTGTTAAGACTCTTACAGGCAAGACCATAACCCTTGAAGTCGAAAGCTC 44201
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| || | ||| ||||||| || || ||||| || || || ||| | || || |
Sbjct 44200 CGACACAATTGACAATATCAAGACCAAGATCCAAGATAAAGAAGGAATTTCTCCGGACGA 44141
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | || || |||||||| |||||| | ||||| || || | | ||||||||
Sbjct 44140 GCAGAGGCTCATCTTTGCCGGTAAACAGCTCGAGGACGGTCGTACTCTTGCGGATTACAA 44081
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||| || || || || || |||| | || | || || ||||| ||
Sbjct 44080 CATCCAGAAGGAGTCAACTCTACACCTTGTCCTTCGTTTACGCGGTGG 44033
>seq28288
Length=9629
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| ||||| | || |||||||| | || || ||||| || | | |
Sbjct 4619 ATGCAGATCTTTGTGAAAACCCTCACTGGTAAAACTATTACCCTAGAAGTTGAGAACTCA 4678
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || |||||||||||||| || || || || || ||
Sbjct 4679 GACACTATTGACAACGTCAAGGCGAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAG 4738
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || || || || ||||| | |||||| || || | | || ||||||
Sbjct 4739 CAGAGACTCATCTTCGCTGGTAAACAACTCGAGGATGGTCGGACATTAGCGGACTACAAC 4798
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| ||||| || ||
Sbjct 4799 ATTCAGAAAGAGTCAAC 4815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419580803357875
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |