Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq18099 86.0 1e-11 >seq18099 Length=159039 Score = 86.0 bits (94), Expect = 1e-11 Identities = 195/290 (67%), Gaps = 10/290 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||| || | ||| |||||||||||| || | || || Sbjct 20102 ATCTGGGAAATGTACAAGAAAGCCGAAGCATCCTTCTGGACCGCCGAAGAAGTCGATCTC 20161 Query 42360 GCCAAGGACACGGCCGGCTGGGAG----TCACTGTCTGAGAACGAAAAGTTTTTCCTCAA 42415 | | |||| | |||||| ||| | | ||||||| | ||| |||| Sbjct 20162 TCACAAGACAACCGTGACTGGGAAAATCTCAACGACGGAGAACGTCAC----TTCATCAA 20217 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 | || |||| || ||||||||||| |||||||| || || || ||||| || | | Sbjct 20218 ACACGTACTCGCTTTCTTCGCCGCATCTGACGGAATCGTACTCGAAAACCTCGCTTCACG 20277 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGCTTCCAGATAGCCA 42534 |||||| ||| || || || || ||||| ||| |||||||| ||||| || || | Sbjct 20278 ATTCATGTCAGATGTACAAGTCTCCGAAGCGCG-TGCATTCTACGGATTCCAAATCGCTA 20336 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATC 42584 | ||||| | || || ||| |||| | || ||| |||| |||||| Sbjct 20337 TTGAGAATATCCATTCAGAGATGTATTCTCTTCTTCTCGACACATACATC 20386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943999532994000