Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_009760.1 Length=218948 Score E Sequences producing significant alignments: (Bits) Value seq7810 104 3e-17 >seq7810 Length=38048 Score = 104 bits (114), Expect = 3e-17 Identities = 191/278 (69%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 164078 TTATTTTACTGCTGTTTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAGC 164137 |||||| || || ||| || |||| |||||||| ||| | ||||||||| | | | Sbjct 28397 TTATTTAACAGCCTCTTTTAAAGCTTTTCCAGCTTTAAATCCAGGTACTTTTCCTCCTGG 28338 Query 164138 AATTTCAATTTCTTCACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAGT 164197 || | |||||||| || ||||| || || || || |||| || | ||| | ||| Sbjct 28337 GATATGCATTTCTTCGCCCGTTTGGGGATTGCGCCCAGTACGTGCAGAACGCTTACGTAC 28278 Query 164198 TTCGAATGTACCAAAGCCGATTAACTGTACTTTGTTACCTTCTGCTAAAGCGTTTGTG-- 164255 ||| ||||||||||| || ||||||||||| | | ||| | | ||| | ||||| Sbjct 28277 TTCAAATGTACCAAATCCAATTAACTGTAC--GGATTCCTCTTTTTGAAGAGATTGTGTA 28220 Query 164256 ATACCGCCAAATACTGCGTCTACAGCTTTTGTAGCATCCTTTTTAGAGATTTCTGCTGTT 164315 || | | | || | ||||| | ||||| || ||||||| | | || | | Sbjct 28219 ATTTGATCTAGGATAGCTTGTACAGATGCAGTAGCCTCTTTTTTAGTAAGTGATGTTTTC 28160 Query 164316 TCAGCTACGTGGTTGATTAATTCAGTTTTGTTCATGAT 164353 |||| ||| ||||| |||| ||| ||||| ||||| || Sbjct 28159 TCAGATACTTGGTTAATTAGTTCGGTTTTATTCATTAT 28122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700253636892000