Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq16226 123 3e-23 seq24711 120 3e-22 seq7697 102 9e-17 seq5576 100 3e-16 seq16372 95.1 1e-14 seq14839 95.1 1e-14 seq8442 93.3 5e-14 seq4225 84.2 2e-11 seq18044 82.4 8e-11 seq14351 82.4 8e-11 >seq16226 Length=39664 Score = 123 bits (136), Expect = 3e-23 Identities = 169/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | || |||||||||||| || | |||| |||||| || || ||||| ||||| Sbjct 11365 ACCTCCACGTAGACGCAACACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGC 11424 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || |||||||| |||||||| || | | |||||||| | ||| Sbjct 11425 AAGAGTGCGACCATCTTCAAGCTGCTTTCCAGCGAAGATCAACCTTTGCTGGTCCGGTGG 11484 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||||||||| |||||| |||| ||| | | | ||||| |||| | Sbjct 11485 GATTCCCTCCTTGTCTTGGATTTTGGCCTTGA-CGTTGTCGATGGTGTCTGAGCTC---T 11540 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||| || || || || || |||| ||||| |||||||| ||||| Sbjct 11541 CCACCTCGAGGGTAATAGTCTTACCAGTTAAGGTCTTGACAAAGATCTGCAT 11592 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | ||| ||| || || |||||||| || |||||||| | | Sbjct 11833 ACGCAACACCAAGTGGAGAGTGGACTCTTTCTGGATATTGTAGTCCGCCAGAGTTCTACC 11892 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || || ||||| || ||||| || | || ||||||||| | || | | ||| || Sbjct 11893 GTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCCTCTTT 11952 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || |||| ||| | | | |||||| ||| || || | |||| Sbjct 11953 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGAGCTTTCAACTTCCAAGGTGA 12011 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| ||||| || | ||||| ||||| || ||||| Sbjct 12012 TGGTCTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 12048 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| ||||| || | || |||||| ||||| ||||| || || | || || | Sbjct 11149 ACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCTAAGGTACGACC 11208 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| ||||| || ||||| ||||||||||| | || | | || || Sbjct 11209 ATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGAGGGATACCTTCTTT 11268 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| || |||| ||| | | | ||||| |||| || || || | | Sbjct 11269 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCTGAGCTC---TCAACCTCAAGGG 11324 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | ||||| || || || | ||||| || ||||||||||| Sbjct 11325 TAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 11364 Score = 82.4 bits (90), Expect = 8e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||||| ||| || | || || |||||||| |||||||| Sbjct 10945 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 11004 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 11005 GATTAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTGGCCTTGACATT 11064 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| || || || | || ||||| || || || || ||||| Sbjct 11065 GTCAATTGTGTCCGAGCTC---TCAACCTCAAGGGTAATGGTCTTTCCGGTGAGAGTCTT 11121 Query 42194 TACAAAGATTTGCAT 42208 || || || ||||| Sbjct 11122 CACGAAAATCTGCAT 11136 >seq24711 Length=27656 Score = 120 bits (132), Expect = 3e-22 Identities = 161/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || |||||| |||||| || |||||||| ||||||| |||||| | Sbjct 5323 ACGCAACACCAAGTGTAATGTGGACTCCTTCTGGATATTGTAGTCAGCCAAAGTCCGACC 5264 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || || || ||||| ||||||||||| | ||| | | |||||| Sbjct 5263 ATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTT 5204 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| || || | ||| | | | ||||| |||| ||||| || | | Sbjct 5203 GTCCTGGATCTTAGCCTTCA-CGTTGTCAATTGTGTCTGAGCTC---TCCACCTCAAGAG 5148 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || || || | ||||| || || || ||||| Sbjct 5147 TGATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 5108 Score = 102 bits (112), Expect = 9e-17 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| |||||||| ||||||||| |||||||| ||||||| || || | Sbjct 5095 ACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTACGACC 5036 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || || || || | | ||||||||| | ||| | | ||||| Sbjct 5035 ATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGAATACCTTCCTT 4976 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 || ||| ||| || | ||| | | | ||||| ||| ||||| |||| | Sbjct 4975 ATCTTGGATCTTTGCCTTCA-CGTTGTCAATAGTGTCAGAACTC---TCCACCTCGAGGG 4920 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | ||||| || || || | ||||| || ||||||||||| Sbjct 4919 TAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 4880 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || | || ||||||||||||||| | || ||| || || || ||||||||||| Sbjct 4879 ACCACCACGTAGACGCAACACCAAATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGC 4820 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| | |||| || |||||||||||||| || || | || ||||||||| | || Sbjct 4819 CAAAGTTCTGCCGTCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCCGGAGG 4760 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | ||| |||| | ||| | || | || | | | | |||||| ||| | Sbjct 4759 AATACCCTCTTTGT-CTTGAATCTTGGCCTTCACATTGTCAATAGTGTCGGAGCTTTCAA 4701 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | || || || |||||||| | ||||| |||||||| ||||| Sbjct 4700 CTTCCAAAGTAATAGTCTTGCCCGTCAAGGTCTTAACAAAGATCTGCAT 4652 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || ||||| || ||||||||||| |||| || || | Sbjct 4411 ACGCAACACCAAGTGAAGCGTAGATTCCTTCTGGATATTGTAATCCGCCAAGGTACGTCC 4352 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || | |||||||||||||| || | || |||||| || | || | | ||||| Sbjct 4351 GTCTTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATACCTTCCTT 4292 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 ||| ||| | || | || | ||| | | | ||| || |||||| |||| |||| Sbjct 4291 ATCC-TGAATCTTCGCTTTAACGTTGTCGATCGTATCAGAACTTTCCACCTCGAGAGTGA 4233 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || || || || || || |||||||| ||||| Sbjct 4232 TTGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 4196 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || ||||| |||||||| ||||| || || | || || ||||||||||||||||| Sbjct 5527 CTCTTTCTGAATGTTGTAATCCGCCAGTGTACGACCATCCTCAAGCTGCTTACCAGCGAA 5468 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 || || ||||||||||| | ||| | | ||||| ||| ||| || Sbjct 5467 GATTAGACGCTGCTGGTCCGGTGGAATACCTTCCTTATCCTGGATCTT 5420 >seq7697 Length=17472 Score = 102 bits (112), Expect = 9e-17 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | |||||| || | || ||| ||||| || ||||| || || Sbjct 10420 ACCACCTCTGAGACGAAGCACCAAGTGGAGAGTAGACTCTTTTTGGATGTTGTAGTCTGC 10479 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || ||||||||||| || || || || |||| |||||| || | ||| Sbjct 10480 GAGTGTGCGACCATCCTCTAGCTGCTTCCCGGCAAAGATAAGTCTCTGCTGATCCGGTGG 10539 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||| ||||| |||||| |||| | | | ||||| |||| || Sbjct 10540 GATTCCCTCTTTGTCTTGGATTTTGGCCTTGACATTATCGATTGTGTCTGAGCTC---TC 10596 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | ||||| |||||||| || || ||||| |||||||| ||||| Sbjct 10597 CACCTCCAAAGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 10647 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| | ||| | ||| |||||| || || || || || || || || || | Sbjct 10204 ACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTATAGTCTGCTAGGGTGCGTCC 10263 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| |||||||||||||| || || || |||| ||||||||| | ||| | | ||| || Sbjct 10264 GTCTTCTAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATTCCCTCTTT 10323 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| | || | |||| | | | ||||| |||| ||||| || | | Sbjct 10324 GTCC-TGAATCTTAGCCTTGACGTTATCAATAGTGTCAGAGCTC---TCCACCTCCAAAG 10379 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| ||||| || || || ||||| ||||| || ||||| Sbjct 10380 TGATTGTTTTACCGGTAAGGGTCTTCACAAAAATCTGCAT 10419 Score = 89.7 bits (98), Expect = 6e-13 Identities = 152/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||||||| | || | ||| ||| || || || ||||| || || ||||||| | Sbjct 10888 ACGCAACACAAGGTGGAGTGTAGACTCTTTCTGGATGTTGTAGTCTGCTAGAGTCCTTCC 10947 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || || |||||||||||||| || |||| ||||| || | || | | ||| || Sbjct 10948 ATCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGAATTCCCTCTTT 11007 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 |||| ||| ||| |||| | | | ||| || |||| || || || | || Sbjct 11008 GTCCTGGATCTTTGCCTTGACGTTATCGATCGTATCAGAGCTC---TCAACCTCAAGAGT 11064 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || || || | ||||| |||||||||||||| Sbjct 11065 GATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 11103 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || || | ||||| ||||| || ||||| || |||||||| || || Sbjct 11104 ACCACCTCTCAATCGGAGAACCAAGTGCAAGGTTGATTCCTTCTGGATATTGTAGTCTGC 11163 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| || | || |||||||| ||||||||||| || | || ||||| || | || Sbjct 11164 CAAAGTACGGCCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGAGG 11223 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||||||||| ||| || |||| | | | ||||| |||| || Sbjct 11224 AATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATAGTGTCAGAGCTC---TC 11280 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| || ||||| || || || || || || || || |||||||| Sbjct 11281 GACCTCGAGAGTTATGGTCTTTCCAGTAAGTGTTTTCACGAATATTTGCAT 11331 >seq5576 Length=16168 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| ||||||| ||||| || | || ||||||||| || ||||||||||| Sbjct 1254 ACCTCCTCTCAAACGCAGAACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCAGC 1313 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || |||| || ||||| ||||| || || || || | || ||||| | || Sbjct 1314 CAAGGTACGGCCGTCCTCGAGCTGTTTACCGGCAAAGATAAGCCTTTGTTGGTCCGGAGG 1373 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || ||||| ||| || |||| | | || |||||| ||| || Sbjct 1374 GATTCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCTACGGTGTCGGAGCTTTCGAC 1433 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || ||||| |||||||| || || || || ||||||||||| Sbjct 1434 CTCAAGTGTTATGGTCTTGCCCGTAAGAGTTTTCACGAAGATTTGCAT 1481 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/197 (73%), Gaps = 10/197 (5%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| ||||||||||| || ||||| || | || || ||||| ||||||||||| Sbjct 834 CTCCTTTTGGATATTGTAATCCGCAAGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAA 893 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || |||| ||| ||||| | | | | ||||||| | ||| | || | |||| || Sbjct 894 GATCAGTCTCTGTTGGTCCGGAGTGATCCCTTCCTTGT-CTTGAATCTTGGCCTTGA-CG 951 Query 42136 TCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 42191 | | | | ||||| |||| || || || | || ||||||||||| |||| || Sbjct 952 TTGTCGATGGTGTCTGAGCTC---TCAACTTCTAAGGTAATGGTTTTGCCAGTTAAGGTT 1008 Query 42192 TTTACAAAGATTTGCAT 42208 || |||||||||||||| Sbjct 1009 TTCACAAAGATTTGCAT 1025 >seq16372 Length=415 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 304 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 245 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 244 TACTACCGAGGA 233 >seq14839 Length=23228 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||| | ||| | ||| | ||| | ||| |||||| || || || || ||||| Sbjct 10319 ACCACCTCCGAGACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTATAGTCAGC 10378 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | || || ||||||||||| ||||||||||||| ||||| ||| | ||| Sbjct 10379 GAGTGTCCTTCCATCTTCAAGCTGCTTACCCGCGAATATGAGTCTCTGCTCGTCCGGTGG 10438 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | ||||||||| ||| || |||| ||| | | | ||| | ||| | Sbjct 10439 GATTCATTCCTTGTCCTGGATCTTAGCCTTGA-CGTTGTCAATAATGTTGAAGCTTTCAA 10497 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||| || ||||| ||||| || | ||||| ||||| || ||||| Sbjct 10498 CTTCGAGGGTAATGGTCTTGCCTGTCAAAGTCTTCACAAAAATCTGCAT 10546 >seq8442 Length=60656 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| ||||| | ||||||||||| || ||||| |||||||||||||| | Sbjct 43805 CCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCTCCA 43864 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || |||| || || || ||||||||||| ||||| | ||| | ||| | || Sbjct 43865 AGGGTTCGACCGTCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCTGGAGGG 43924 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157 | | ||||| || ||| || |||| ||||| | | ||||| |||| || Sbjct 43925 ATCCCTTCCTTATCTTGGATCTTCGCCTTGA-CGTCGTCAATGGTGTCTGAGCTC---TC 43980 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | || || ||||| || || || || || |||| ||||||||| Sbjct 43981 AACTTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAACTATTTGCATT 44032 >seq4225 Length=52512 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||||||| || | |||||||| | || || || || || ||||||||||| Sbjct 2735 CCTCCTCTTAATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGTTGTAATCAGCG 2794 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || | |||| |||| || ||||| || || || | || |||||||| | ||| Sbjct 2795 AGTGTTCTTCCGTCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCCGGTGGA 2854 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||||| | ||| | || | ||| | | | | ||||| ||||| || Sbjct 2855 ATTCCTTCCTTGT-CTTGAATCTTCGCTTTCACATTGTCGATTGTGTCCGAAGATTCAAC 2913 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTT 42210 || | || || || || |||||||| || || || ||||| ||||||| Sbjct 2914 CTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTT 2963 >seq18044 Length=6213 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||||| || || | || || ||||| |||||||| || Sbjct 3342 TCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCATCCTCAAGCTGTTTACCAGCAAAA 3401 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || |||| ||||||||| | || | | ||||| || ||| || |||| ||| Sbjct 3402 ATCAGTCTCTGCTGGTCCGGAGGGATTCCTTCCTTATCTTGGATCTTGGCCTTGA-CGTT 3460 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| ||| || || | || ||||| ||||| || || ||||| || Sbjct 3461 GTCAATGGTGTCTGAACTTTCGACCTCAAGGGTTATGGTCTTGCCAGTAAGAGTCTTAAC 3520 Query 42197 AAAGATTTGCAT 42208 |||||| ||||| Sbjct 3521 AAAGATCTGCAT 3532 >seq14351 Length=15190 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || ||||| ||||| ||||| | ||||| | || || ||||| ||||||||||| Sbjct 4809 CTCTTTCTGAATGTTGTAGTCAGCTAATGTCCGACCATCCTCGAGCTGTTTACCAGCGAA 4750 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || |||| ||| ||||| | ||| | | ||||||||| ||| | || | || | Sbjct 4749 GATTAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCC-TGAATCTTCGCCTTCACAT 4691 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||| || ||| ||| || || | ||||||||||| ||||| | |||| Sbjct 4690 TATCAATCGTATCCGAGCT---TTCGACTTCAAGAGTGATGGTTTTACCCGTCAAAGTCT 4634 Query 42193 TTACAAAGATTTGCAT 42208 | ||| | || ||||| Sbjct 4633 TGACAGATATCTGCAT 4618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543017413146000