Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq16226 143 3e-29 seq24711 132 5e-26 seq5576 129 6e-25 seq7697 125 7e-24 seq18044 118 1e-21 seq8442 109 5e-19 seq25505 93.3 4e-14 seq14351 86.0 6e-12 >seq16226 Length=39664 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || |||||||| || |||||||| || || Sbjct 11822 CCACCACGAAGACGCAACACCAAGTGGAGAGTGGACTCTTTCTGGATATTGTAGTCCGCC 11881 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | || || || || ||||| ||| ||||||||| |||||| || ||||| Sbjct 11882 AGAGTTCTACCGTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 11941 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| |||||| ||| || ||||| |||| || | |||||| | || || || Sbjct 11942 ATACCCTCTTTGTCCTGGATCTTGGCCTTGACGTTG-TCAATGGTGTCGGAGCTTTCAAC 12000 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | || |||||||||| || || |||||||||||||| Sbjct 12001 TTCCAAGGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAAATCTGCAT 12048 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| ||||||||||| || | || ||||| || || || ||||| || | Sbjct 11366 CCTCCACGTAGACGCAACACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCA 11425 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| ||||||| | ||||| || || || Sbjct 11426 AGAGTGCGACCATCTTCAAGCTGCTTTCCAGCGAAGATCAACCTTTGCTGGTCCGGTGGG 11485 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| |||||| ||||| |||| |||| |||||| | ||||| || Sbjct 11486 ATTCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTG-TCGATGGTGTCTGAGCTCTCCAC 11544 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || || || | || || ||||| |||||||| Sbjct 11545 CTCGAGGGTAATAGTCTTACCAGTTAAGGTCTTGACAAAGATCTGCAT 11592 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| || || || ||||| || || Sbjct 10910 CCACCACGGAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 10969 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | |||||||| || ||||| Sbjct 10970 AAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATTAGACGCTGCTGGTCCGGAGGA 11029 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||||| | || | ||||||| ||||| || Sbjct 11030 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATTGTGTCCGAGCTCTCAACC 11089 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||| ||||| || || ||||||||||| Sbjct 11090 TCAAGGGTAATGGTCTTTCCGGTGAGAGTCTTCACGAAAATCTGCAT 11136 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || ||||| || || ||||||||||| ||| || || ||| || Sbjct 12296 ACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAATCCGCCAAGGTACGTCCATCTTCC 12355 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | || ||||||||| ||||||||| ||||||||| ||||| || || ||||| ||| | Sbjct 12356 AATTGCTTTCCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATTCCTTCCTTATCCTGG 12415 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | |||| || | ||||| | ||| || || |||| ||| | || || Sbjct 12416 ATCTTAGCCTTAACGTTG-TCAATCGTGTCAGAACTTTCCACCTCGAGGGTGATTGTCTT 12474 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| |||||||| ||||| |||||||| Sbjct 12475 TCCGGTGAGAGTTTTCACAAAGATCTGCAT 12504 Score = 105 bits (116), Expect = 6e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | |||||||| || || || ||||| || | Sbjct 11594 CCACCACGAAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCTGCA 11653 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || || || ||||||| | |||||| || ||||| Sbjct 11654 AGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGA 11713 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTT--GAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || ||||| |||| | ||| | | |||| |||| |||| |||||| | ||||| | Sbjct 11714 ATACCCTCTTTGT-CTTGAATCTTGGCTTTCACGTTG-TCGATGGTGTCTGAGCTCTCAA 11771 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| || | || || || |||| || || || || |||||||| Sbjct 11772 CCTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 11820 >seq24711 Length=27656 Score = 132 bits (146), Expect = 5e-26 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | |||||| || || || ||||||||||| || Sbjct 4422 CCACCACGAAGACGCAACACCAAGTGAAGCGTAGATTCCTTCTGGATATTGTAATCCGCC 4363 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || | || || |||||| ||||||||| ||||||||| ||||| Sbjct 4362 AAGGTACGTCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTCTGCTGATCCGGAGGA 4303 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||| ||| ||| | | |||| | |||| |||| || || | ||| || | Sbjct 4302 ATACCTTCCTTATCC-TGAATCTTCGCTTTAACGTTG-TCGATCGTATCAGAACTTTCCA 4245 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| || | || || ||||| |||||||| ||||| |||||||| Sbjct 4244 CCTCGAGAGTGATTGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 4196 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| |||| || ||||| || || |||||||| || || Sbjct 5334 CCACCACGGAGACGCAACACCAAGTGTAATGTGGACTCCTTCTGGATATTGTAGTCAGCC 5275 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| ||||| || |||| | |||||||| || || || Sbjct 5274 AAAGTCCGACCATCCTCAAGCTGCTTTCCTGCAAAGATGAGACGCTGCTGGTCCGGTGGG 5215 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||| | ||||| | | ||||| | ||||| || Sbjct 5214 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTGT-CAATTGTGTCTGAGCTCTCCAC 5156 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||||| || || || ||||||||||| Sbjct 5155 CTCAAGAGTGATTGTCTTCCCGGTCAAGGTCTTAACGAAAATCTGCAT 5108 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| |||||||||||||| | ||||||||||| || || |||||||| || Sbjct 4878 CCACCACGTAGACGCAACACCAAATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCC 4819 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || ||||| || ||||| ||||||||| |||||| || ||||| Sbjct 4818 AAAGTTCTGCCGTCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCCGGAGGA 4759 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| ||||| || || ||| | | || | ||||| | || || ||| Sbjct 4758 ATACCCTCTTTGTCTTGAATCTTGGCCTTCACATTGTCAATAGTGTCGGAGCTTTCAACT 4699 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| |||| || || ||||| |||||||| Sbjct 4698 TCCAAAGTAATAGTCTTGCCCGTCAAGGTCTTAACAAAGATCTGCAT 4652 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | |||||||| ||||| |||||||| || || Sbjct 5106 CCACCACGAAGACGCAACACCAAGTGCAATGTAGACTCCTTTTGGATATTGTAGTCAGCC 5047 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| ||||| || ||||||| | |||||| || || || Sbjct 5046 AAGGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGA 4987 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||| || ||| | |||| || | ||||| | |||||| || Sbjct 4986 ATACCTTCCTTATCTTGGATCTTTGCCTTCACGTTG-TCAATAGTGTCAGAACTCTCCAC 4928 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || || |||| || || || || || ||||| Sbjct 4927 CTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 4880 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || |||||||| ||||| |||||||| || Sbjct 5562 CCACCACGGAGACGGAGGACCAAGTGGAGGGTTGACTCTTTCTGAATGTTGTAATCCGCC 5503 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| || |||||| |||| | |||||||| || || || Sbjct 5502 AGTGTACGACCATCCTCAAGCTGCTTACCAGCGAAGATTAGACGCTGCTGGTCCGGTGGA 5443 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| ||| ||| || ||| | | || | || || | ||||| ||| Sbjct 5442 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTATCAATAGTATCAGAGCTCTCAACT 5383 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || ||||| || || ||||||||||| Sbjct 5382 TCAAGTGTGATTGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 5336 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||| | |||||||| || || ||||||||||| | | || ||| ||| || Sbjct 4633 CACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCCGCAAGAGTACGACCATCCTC 4574 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || || ||||||||| | ||||| | ||||||||| ||||| || || ||||| || Sbjct 4573 AAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGATCCGGAGGAATACCTTCCTTATCTTG 4514 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | | || | ||| || | |||||| || || | || | ||||| Sbjct 4513 AATCTTGGCCTTAACATTGTCAATGGTATCAGAACTCTCCACCTCAAGAGTAATAGTTTT 4454 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || || ||||| |||||||| Sbjct 4453 ACCAGTCAAGGTCTTCACAAAGATCTGCAT 4424 >seq5576 Length=16168 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| ||||| ||||||||||| | | |||||| ||| || |||||||| ||| Sbjct 829 GTAGACTCCTTTTGGATATTGTAATCCGCAAGAGTGCGACCATCCTCGAGCTGTTTACCA 888 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| || ||| || || |||| || || |||||||| || || |||| Sbjct 889 GCGAAGATCAGTCTCTGTTGGTCCGGAGTGATCCCTTCCTTGTCTTGAATCTTGGCCTTG 948 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | ||||| ||||| | ||| | |||||||| || | || Sbjct 949 ACGTTG-TCGATGGTGTCTGAGCTCTCAACTTCTAAGGTAATGGTTTTGCCAGTTAAGGT 1007 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| ||||| || ||||| Sbjct 1008 TTTCACAAAGATTTGCAT 1025 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || ||||| ||||||||||| | | || || ||| ||||||||||| || Sbjct 1057 GTTGATTCCTTTTGGATATTGTAATCCGCAAGAGTACGGCCATCCTCTAGCTGTTTACCG 1116 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | ||| || || ||||| || || || || || || || |||| Sbjct 1117 GCAAAGATAAGCCTCTGTTGGTCCGGAGGGATTCCTTCTTTATCTTGAATCTTGGCCTTG 1176 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | |||||| | || ||||| |||| || | |||||||| || || || Sbjct 1177 ACGTTG-TCAATGGTGTCTGAGCTTTCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGGT 1235 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| ||||| || ||||| Sbjct 1236 TTTCACAAAGATTTGCAT 1253 >seq7697 Length=17472 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | ||||| | ||||| || | || || || || || |||||||| || || Sbjct 11105 CCACCTCTCAATCGGAGAACCAAGTGCAAGGTTGATTCCTTCTGGATATTGTAGTCTGCC 11164 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| ||||||||||| |||||| ||||||||| |||||||| ||||| Sbjct 11165 AAAGTACGGCCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGAGGA 11224 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||||| | |||| ||||| | |||||||| Sbjct 11225 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATAGTGTCAGAGCTCTCGACC 11284 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || || || || ||||| || || || ||||| Sbjct 11285 TCGAGAGTTATGGTCTTTCCAGTAAGTGTTTTCACGAATATTTGCAT 11331 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | |||||||||||||| || ||||| || | | |||||| ||| || Sbjct 10438 CACCAAGTGGAGAGTAGACTCTTTTTGGATGTTGTAGTCTGCGAGTGTGCGACCATCCTC 10497 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||| || || || |||| | || ||||||||| || || || ||||| ||||| Sbjct 10498 TAGCTGCTTCCCGGCAAAGATAAGTCTCTGCTGATCCGGTGGGATTCCCTCTTTGTCTTG 10557 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| ||||| | |||| ||||| | ||||| || || | || | ||||| Sbjct 10558 GATTTTGGCCTTGACATTATCGATTGTGTCTGAGCTCTCCACCTCCAAAGTGATTGTTTT 10617 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || || || || ||||| |||||||| Sbjct 10618 GCCAGTGAGGGTCTTCACAAAGATCTGCAT 10647 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||| | || | ||||||||||| || || ||||| || | Sbjct 10877 CCACCACGAAGACGCAACACAAGGTGGAGTGTAGACTCTTTCTGGATGTTGTAGTCTGCT 10936 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || || || || |||||| |||| | || |||||||| ||||| Sbjct 10937 AGAGTCCTTCCATCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGCTGATCCGGAGGA 10996 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| |||||| ||| || ||||| | |||| || || | ||||| || Sbjct 10997 ATTCCCTCTTTGTCCTGGATCTTTGCCTTGACGTTATCGATCGTATCAGAGCTCTCAACC 11056 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||||| ||| || ||||| || ||||| Sbjct 11057 TCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 11103 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||| | ||| | |||||||| || || || || || || | Sbjct 10193 CCACCACGAAGACGAAGCACAAGATGGAGTGTAGACTCCTTCTGGATGTTATAGTCTGCT 10252 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || |||||||| || || || |||| | || |||||| || || || Sbjct 10253 AGGGTGCGTCCGTCTTCTAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGTGGG 10312 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| |||||| || || ||||| | || | ||||| | ||||| || Sbjct 10313 ATTCCCTCTTTGTCCTGAATCTTAGCCTTGACGTTATCAATAGTGTCAGAGCTCTCCACC 10372 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| ||||| || || || |||||||||||||| Sbjct 10373 TCCAAAGTGATTGTTTTACCGGTAAGGGTCTTCACAAAAATCTGCAT 10419 >seq18044 Length=6213 Score = 118 bits (130), Expect = 1e-21 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || || || || ||||| |||||||| | | || ||| ||| || Sbjct 3096 ACCAAATGCAGGGTTGATTCCTTCTGAATGTTGTAATCTGCAAGGGTTCGACCATCCTCG 3155 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 |||||||| || || |||||| | |||||| || ||||| || || |||||||| || Sbjct 3156 AGCTGTTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCT-TG 3214 Query 127025 ATTTTCTGCTTGAG--TTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 | ||| |||| | |||| | | |||||| | ||||||||||| | ||| | |||| Sbjct 3215 AATTTTAGCTTTAACATTGT-CAATGGTGTCTGAGCTCTCGACTTCTAGGGTAATTGTTT 3273 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || ||||| || ||||| |||||||| Sbjct 3274 TACCAGTAAGAGTCTTGACAAATATCTGCAT 3304 >seq8442 Length=60656 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | || || | ||||||||| | || || || || |||||||||||||| || Sbjct 43804 TCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCTCC 43863 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| || || || ||||| |||||| |||| | | ||| | || ||||| Sbjct 43864 AAGGGTTCGACCGTCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCTGGAGG 43923 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| || ||| ||| ||||| | || | |||||| | ||||| || Sbjct 43924 GATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGGTGTCTGAGCTCTCAAC 43983 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | ||||| || || || ||||| |||| || ||||| Sbjct 43984 TTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAACTATTTGCAT 44031 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||||||||| || | || | |||| || ||||| || || || |||||||| | Sbjct 44032 TCCACCGCGTAAACGAAGGACAAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCCGC 44091 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| || || |||||||| || || |||| | | ||||| || |||| Sbjct 44092 AAGAGTACGACCGTCCTCGAGCTGTTTACCGGCAAAGATGAGCCTCTGCTCGTCCGGAGA 44151 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || || || ||| || ||||| | || | ||||| | || ||||| Sbjct 44152 AATTCCTTCTTTATCTTGGATCTTGGTCTTGATATTGTCAATTGTGTCGGAGCTTTCGAC 44211 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 ||| | ||| | || ||||| || ||||| || ||||| || ||||| || Sbjct 44212 TTCAAGGGTTATGGTCTTGCCTGTAAGAGTCTTAACAAAGATTTGCATCGC 44262 >seq25505 Length=75187 Score = 93.3 bits (102), Expect = 4e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 126901 CAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATC 126960 ||| |||||||| | || |||||||| ||||||||||| || | | || || ||| Sbjct 56720 CAAGACCAAATGAAGAGTCGACTCTTTCTGAATATTGTAGTCCGCTAGTGTTCGGCCATC 56661 Query 126961 GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 127020 || || ||||| ||||| ||||||||| ||| ||||| || ||||| ||||| ||||| Sbjct 56660 TTCAAGTTGTTTACCAGCAAAGATCAATCTCTGTTGATCTGGTGGTATTCCCTCTTTGTC 56601 Query 127021 C 127021 | Sbjct 56600 C 56600 >seq14351 Length=15190 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/229 (70%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || || ||| | || | || || || || ||||| || ||||| | Sbjct 4616 CCACCACGGAGTCTCAGCACAAGGTGAAGAGTTGATTCCTTCTGAATGTTATAATCAGCA 4557 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || || |||||||||| |||| | | ||| || || ||||| Sbjct 4556 AGAGTTCGACCATCCTCAAGTTGTTTTCCAGAA-AGATGAGCCTCTGTTGGTCCGGAGGG 4498 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAG--TTGTTCGACGGTGTCCGTACTCTCGA 127064 || || |||||||| ||| ||| |||| | |||| | | |||||| | ||||||| Sbjct 4497 ATCCCTTCCTTGTCT-TGAATTTA-GCTTTAACATTGT-CAATGGTGTCTGAGCTCTCGA 4441 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | ||| | ||||| || || || || || ||||| |||| ||| Sbjct 4440 CTTCTAGGGTAATGGTTTTACCCGTGAGTGTCTTGACAAAGATCTACAT 4392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475329768306000