Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_015283.1
Length=176428
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 558 4e-154
>seq11714
Length=14353
Score = 558 bits (618), Expect = 4e-154
Identities = 723/999 (72%), Gaps = 0/999 (0%)
Strand=Plus/Minus
Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550
||||| | ||| |||| |||||| | || | ||||| |||| ||||| ||||| ||
Sbjct 1429 TTCTGTAACTGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 1370
Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610
|||||||| ||||| || ||| | | ||| ||| | ||||| |||||||| ||
Sbjct 1369 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCT 1310
Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670
|| || ||||| || || || | |||||||| | || |||| | || ||||||||
Sbjct 1309 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAAT 1250
Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730
|| || |||||||| || |||| |||| || || ||| | || || ||||||||
Sbjct 1249 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCAATC 1190
Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790
|||||||| || | | ||||| ||| |||| || || |||||||| | | | |
Sbjct 1189 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGTT 1130
Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGA 168850
| ||||| || | || | || || |||||| | |||||||| | | | |
Sbjct 1129 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1070
Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910
|| |||||| | |||||||| |||||| |||||||| || || | || ||| |||
Sbjct 1069 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCAACTGCT 1010
Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970
|| ||| | | |||||| ||||||| || ||| |||||||||||||||||||||||
Sbjct 1009 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 950
Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030
||||| || |||||||| ||| | |||||||| || |||||||||||||||||||| ||
Sbjct 949 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 890
Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090
|| || ||| ||| ||||| ||| | ||||| || || ||||| || |||||||||
Sbjct 889 TTTCACATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 830
Query 169091 TCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGT 169150
|| | ||||| ||| | | ||||| || || || || | |||||| || | |||
Sbjct 829 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 770
Query 169151 TACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGT 169210
|||| ||||| |||||||||||||| ||||| ||||| || || ||||| || || ||
Sbjct 769 TACAGATTCGGACAAGAAGAAGAAACTTATAACATTGTAGCTGCTCATGGTTATTTTGGC 710
Query 169211 AGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 169270
|||| ||||| || ||||| ||||||||||| || | | | || |||||| ||||
Sbjct 709 CGATTGATCTTTCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 650
Query 169271 GTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 169330
| | || || ||| || | ||||| || || | ||||| | || ||||| ||||||
Sbjct 649 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACCATGGCTTTCAAC 590
Query 169331 TTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACA 169390
| || || || || || ||||||||||| || ||| | | || | ||| |||
Sbjct 589 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGCGTTATTAATACT 530
Query 169391 TGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 169450
|||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| |||
Sbjct 529 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 470
Query 169451 CACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489
||||||||||| |||||| |||| ||| |||| || ||
Sbjct 469 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564238577412000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |