Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_015287.1
Length=232878
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 504 1e-137
>seq11714
Length=14353
Score = 504 bits (558), Expect = 1e-137
Identities = 697/974 (72%), Gaps = 6/974 (1%)
Strand=Plus/Minus
Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCT---C 215371
||||| |||||| | ||| |||| ||||||||||| | ||||| ||| | | | |
Sbjct 1408 ACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 1349
Query 215372 GCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGA 215431
||| || || || | | |||| ||||||| ||||| ||||| || ||||| || ||
Sbjct 1348 GCAACTTCCGTTTTTATTATCG---CATTCATTGCTGCTCCTCCAGTAGATATTGATGGT 1292
Query 215432 ATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTT 215491
|| | || || ||| |||| ||| | | || || ||||| || || || ||||| ||
Sbjct 1291 ATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCAGGTGCCATT 1232
Query 215492 GTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTT 215551
| |||| ||| || || || || || || ||||| ||||||||||| ||| | |||
Sbjct 1231 ATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCAATCTGGGAAGCTGCATCCGTT 1172
Query 215552 GACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGT 215611
|| |||||||| ||||| || || |||| |||| || | | ||||| | |||||
Sbjct 1171 GATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGT 1112
Query 215612 ATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGG 215671
| || || || | ||||||||||| || | | | |||||| | ||||||
Sbjct 1111 GTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGG 1052
Query 215672 ATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCA 215731
|| |||||| || || || ||||| | ||||| ||| || ||| | | || |||
Sbjct 1051 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCAACTGCTGTTTTCTTGATCTACCCA 992
Query 215732 TTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTAC 215791
| ||||| || ||| ||||||| |||||| || ||||||||||| || |||||||
Sbjct 991 ATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTT 932
Query 215792 ATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTG 215851
||| |||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct 931 ATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCGTA 872
Query 215852 GCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCT 215911
|| ||||| ||||| || || | || ||| ||||| ||||| | || || ||| |
Sbjct 871 GCGGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGT 812
Query 215912 CTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAG 215971
| ||||| || || || || | |||||| || | ||||||| |||||||||||
Sbjct 811 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGACAAGAA 752
Query 215972 GAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATAC 216031
|| ||||| || ||||| |||||||| || ||||| ||||| || | ||||| |||||
Sbjct 751 GAAGAAACTTATAACATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTTCAATAT 692
Query 216032 GCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGT 216091
|| ||||||||| || | | | || |||||| | || || | || || | ||
Sbjct 691 GCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGT 632
Query 216092 ATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTC 216151
|| ||| ||||| | ||| | || ||||| |||||||| || |||||||| |||
Sbjct 631 ATTTGGTTTACTGCTTTAGGTATTAGCACCATGGCTTTCAACCTAAATGGTTTCAATTTC 572
Query 216152 AACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAAC 216211
||||| || || || || || |||||| ||||||||| || || |||||
Sbjct 571 AACCAATCAGTAGTTGATAGTCAAGGACGCGTTATTAATACTTGGGCTGATATTATTAAC 512
Query 216212 AGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGAC 216271
| || |||||||||||||| ||||| || ||||| |||||||||||||| |||||
Sbjct 511 CGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGAC 452
Query 216272 TTGGCTGCTGCTGA 216285
| ||||||| |||
Sbjct 451 CTAGCTGCTGTTGA 438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 744813603462000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |