Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq11714 639 2e-178 >seq11714 Length=14353 Score = 639 bits (708), Expect = 2e-178 Identities = 725/972 (75%), Gaps = 0/972 (0%) Strand=Plus/Plus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 |||||||| || || |||||||| ||||| |||||||||||||| ||||| |||| Sbjct 459 GGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGTTAATA 518 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| ||||| ||||| | ||| || ||| ||||| || | || ||||| || Sbjct 519 ATATCAGCCCAAGTATTAATAACGCGTCCTTGACTATCAACTACTGATTGGTTGAAATTG 578 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 || ||||| || || || ||||||||||||| ||| | ||||| ||||||||| || || Sbjct 579 AAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGCAGTAAACCAAATACCTACT 638 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 || |||||||| || ||||| || || | ||||||| ||||||||| |||||| || Sbjct 639 ACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCATATTGA 698 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 ||||| | || || || || || |||||||| ||||| ||||||||||| |||||||| Sbjct 699 AAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATGTTATAAGTTTCTTCTTCTTGT 758 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 ||||| ||||||| | || || |||||||||| ||||| | ||| | | |||| Sbjct 759 CCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAA 818 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404 || || | ||||||||||| ||| ||||| | || ||||||||||| || || || Sbjct 819 GTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACACCCGCTACGCCT 878 Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 ||||||||||| || |||||||| ||||| || || |||||||| |||| ||| ||||| Sbjct 879 AACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACAATCATAAAGTTG 938 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || ||||| || || ||||| |||||||| ||| ||||| || | || || Sbjct 939 AAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCAATTGGGTAG 998 Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584 | | ||| ||||||| ||| |||||||| ||||| || || |||||| ||||| ||| Sbjct 999 ATCAAGAAAACAGCAGTTGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGA 1058 Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644 |||||||| ||||| | ||||||||| ||||||||||| ||| | | |||||| Sbjct 1059 CGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTACACCAAGT 1118 Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704 | ||||| | |||| |||| |||||| || || || ||||||||||| || | | Sbjct 1119 AAAAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAGCCATTCATCAACGGAT 1178 Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764 || |||||||| || || || ||||| | ||||||||| ||| | |||| | |||| Sbjct 1179 GCAGCTTCCCAGATTGGGTAAAAATGCAAACCAATAGCTGCAGAAGTAGGAATAATGGCA 1238 Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824 || ||||| || ||||||||||| | ||||| |||| || || ||||| ||||| ||| Sbjct 1239 CCTGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGAAACAGGTTCACGAATACCATCA 1298 Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAAACAGACAGTGGCAGCAAGTAGA 84884 ||||| ||||| || ||| ||| |||||| || || ||| | ||| || | | || Sbjct 1299 ATATCTACTGGAGGAGCAGCAATGAATGCGATAATAAAAACGGAAGTTGCGGTCAATAAG 1358 Query 84885 GTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGACC 84944 || || ||||| | | |||||||| |||| || | ||| || | |||| ||| | | Sbjct 1359 GTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCAGTGCTGGTTATC 1418 Query 84945 CAATCACAGAAG 84956 || | ||||||| Sbjct 1419 CAGTTACAGAAG 1430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571068120027000