Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_016659.1
Length=47536
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 562 9e-156
>seq11714
Length=14353
Score = 562 bits (622), Expect = 9e-156
Identities = 724/999 (72%), Gaps = 0/999 (0%)
Strand=Plus/Plus
Query 25437 TGTAGACTCAGCAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAAC 25496
|| || |||| ||| |||| ||| |||||||||||||| || ||||| |||||||||||
Sbjct 431 TGGAGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAAC 490
Query 25497 TTCCATGCCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTT 25556
|||||| || | || |||||||||| ||| ||||||||||| | || | ||| |
Sbjct 491 TTCCATACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACGCGTCCTTG 550
Query 25557 GGAATCAACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGAC 25616
|||||| ||||| || ||||| || || || || || || |||||||| ||| |
Sbjct 551 ACTATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAAT 610
Query 25617 TCCCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACT 25676
|| | ||| |||| ||| || | || |||||||| || | |||||||||||||
Sbjct 611 ACCTAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGA 670
Query 25677 ACGGCTATTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGC 25736
||| ||| || || |||||||| || ||||| | || ||||| || |||||||| ||
Sbjct 671 ACGAGAATTGTTGAAACTAGCATATTGAAAGATCAATCGGCCAAAATAACCATGAGCAGC 730
Query 25737 AACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAG 25796
||||||||||| || ||||||||||| |||||| | || || | || |||||||
Sbjct 731 TACAATGTTATAAGTTTCTTCTTCTTGTCCGAATCTGTAACCTTCATTAGCAGATTCATT 790
Query 25797 CCCAGTTGTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAA 25856
| || ||||| | || | ||||| || | || ||||||||| ||||
Sbjct 791 TTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAG 850
Query 25857 AGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTG 25916
| || |||||||| || || || || | ||| || || || |||||||| || |||||
Sbjct 851 GGAGCCGCCGAATACACCCGCTACGCCTAACATGTGAAATGGGTGCATAAGAATGTTGTG 910
Query 25917 TTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATC 25976
|| ||||| || |||| |||||| |||||||| || || || || ||||||||||||||
Sbjct 911 CTCAGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATC 970
Query 25977 AGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGG 26036
||| ||||| ||||| |||| ||||||| ||||| |||||| ||| |||||||||||
Sbjct 971 AGAAAAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTTGCAGCTGCAACAGG 1030
Query 26037 GGCTGAATAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTG 26096
|||||||| || ||| ||||| || | ||| || || | ||||||||||||| |
Sbjct 1031 AGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTC 1090
Query 26097 TCGTCCCAAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCC 26156
|| |||| ||| | | || | | |||||| | ||||| |||| ||| || ||
Sbjct 1091 ACGACCCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACC 1150
Query 26157 ACCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACC 26216
||||| || | ||| || || | || ||||||||||||||||||||| || || | |||
Sbjct 1151 GCCGTTGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATTGGGTAAAAATGCAAACC 1210
Query 26217 GATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGC 26276
|| || ||| | || | || || ||||| || || |||||||| || || | |
Sbjct 1211 AATAGCTGCAGAAGTAGGAATAATGGCACCTGAAATAATATTGTTTCCGTAAAGAAGAGA 1270
Query 26277 TCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAAT 26336
||| || ||||| |||||||||||||| ||||| || ||||| ||||||| ||||| ||
Sbjct 1271 TCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGAT 1330
Query 26337 TAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCAC 26396
| ||| | | ||| || || | | ||||||||| | || |||||||| || |
Sbjct 1331 AATAAAAACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAAT 1390
Query 26397 ATAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 26435
|| || || || | || || || | ||||| ||| ||
Sbjct 1391 GTAAAGACGATTTTCAGTGCTGGTTATCCAGTTACAGAA 1429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151941663311900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |