Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq18099 116 4e-21
>seq18099
Length=159039
Score = 116 bits (128), Expect = 4e-21
Identities = 343/526 (65%), Gaps = 7/526 (1%)
Strand=Plus/Minus
Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232
||||| || |||||||| || | |||||| ||||| || || || ||||| || |||
Sbjct 20655 AAACAAGCGAAATCACAGTGAAGACCTTCGTCTCTTGAGATTAACTCGTTAGAGAAAGTT 20596
Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292
|| || ||||| | || | ||| |||| ||| || || | || || ||||| |||
Sbjct 20595 AAACCAGGCATGAGTCCACGTTTCTTAAGCCAGAAAATCGAACAGAAGGAACCAGAGAAG 20536
Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA 37352
|| ||||||||||| || || ||||| | |||| | |||| ||| | | ||
Sbjct 20535 AATATACCTTCAACACAAGCGAACGCTACGATACGTTCAGCGAATGTT---TGAGATCCA 20479
Query 37353 GAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCT 37412
||||| | | | ||| | || || ||||||| ||| ||||| |||||
Sbjct 20478 TCGATCCAAGTCATAGCCCATTGAGCTTTCTTGGTAACACAAGGAATCGTTTCGATTGCA 20419
Query 37413 TTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATAC 37472
|| | | | | |||||| ||||| | || || || || | || | | ||||
Sbjct 20418 CGGAATAAATGATCTCTTTCTTTGTTATCTTTGATGTATGTGTCGAGAAGAAGAGAATAC 20359
Query 37473 ATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGAT 37532
|| || || || ||||| |||||||| || || || || || || | ||||| ||
Sbjct 20358 ATCTCTGAATGGATATTCTCAATAGCGATTTGGAATCCGTAGAATGCACGCGCTTCGGAG 20299
Query 37533 AATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592
| ||| ||||| | || | ||| | |||||| || || || ||| ||
Sbjct 20298 ACTTGTACATCTGACATGAATCGTGAAGCGAGGTTTTCGAGTACGATTCCGTCAGATGCG 20239
Query 37593 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAATTTTTTCC 37650
|| |||||||| || || | ||| || || || | ||| | | |||| | |||| ||
Sbjct 20238 GCGAAGAAAGCGAGTACGTGTTTGATGAAGTGACGTTCTCCGTCGTTGAGA--TTTTCCC 20181
Query 37651 AATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696
| ||| | |||| ||| | ||| ||||| || ||||||| ||
Sbjct 20180 AGTCACGGTTGTCTTGTGAGAGATCGACTTCTTCGGCGGTCCAGAA 20135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592103751051000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |