Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq27331 111 4e-19 >seq27331 Length=8356 Score = 111 bits (122), Expect = 4e-19 Identities = 283/417 (68%), Gaps = 18/417 (4%) Strand=Plus/Plus Query 150364 GATTCTTTCTCGTAAAACCAAAAAGAAT--GGTGCGTTAGTTGGTGAACCAGGTGTTGGT 150421 ||||||||| | | ||| || || ||| ||||| ||| | || || ||||| ||||| Sbjct 4371 GATTCTTTCGAGAAGAACGAAGAACAATCCGGTGC-TTA-TCGGAGAGCCAGGAGTTGGG 4428 Query 150422 AAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCT 150481 ||||| | ||||| || ||||||||| | || | || || ||||||||| | | Sbjct 4429 AAAACTGCTGTTGTTGAAGGTTTAGCACAAAGGATTGTGAAAGGAGATGTTCCAAACAGT 4488 Query 150482 ATGAAAGATGTTGAAATTC-TTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTA 150540 | | ||||| || ||| |||||||| | |||||||| || ||||||| ||||||| Sbjct 4489 CTTACTGATGT-GAGATTGATTTCTTTGGACATGGGTGCGTTAGTTGCTGGTGCTAAGTA 4547 Query 150541 TCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTAC--AAGAACTAAAAGAACGCGAT 150598 | || || || |||||| | | || ||| || | ||||| | ||||| || Sbjct 4548 CAGAGGAGAGTTTGAAGAAAGATT-GA-AATCTGTTTTGAAAGAAGTTGAAGAAGCTGAA 4605 Query 150599 G---ATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGC 150655 | | || |||||||| || ||||| || ||| || | ||||||||| |||| Sbjct 4606 GGGAAAGTGATTCTGTTTATTGATGAGATTCATTTGGTTCTTGGTGCTGGTAAAACTGAA 4665 Query 150656 GGCGGTTCTTTGGATATGAGC-AATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCG 150714 || || ||||| ||| ||| |||| || ||| | || | ||| | |||| Sbjct 4666 GGG---TCGATGGATGC-AGCTAATCTGTTCAAGCCTATGTTGGCTAGAGGTCAGCTTCG 4721 Query 150715 TGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGC 150771 ||| ||||| ||||| || || ||| | ||| || |||| ||||||||||| Sbjct 4722 ATGCATTGGTGCTACAACTCTTGAAGAGTATAGGAAATACGTTGAGAAAGATGCAGC 4778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147167306729950