Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq18099 91.5 3e-13 >seq18099 Length=159039 Score = 91.5 bits (100), Expect = 3e-13 Identities = 185/272 (68%), Gaps = 2/272 (1%) Strand=Plus/Minus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 |||||||| || || | |||||| |||||||| ||||| |||||||| || | || || Sbjct 20361 TACATCTCTGAATGGATATTCTCAATAGCGATTTGGAATCCGTAGAATGCACGCGCTTCG 20302 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGA 48543 | || || || |||| ||||| | ||| || || || || || || || || Sbjct 20301 GAGACTTGTACATCTGACATGAATCG-TGAAGCGAGGTTTTCGAGTACGATTCCGTCAGA 20243 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 || || ||||| || || || ||||| | ||| || || || || | ||||| | Sbjct 20242 TGCGGCGAAGAAAGCGAGTACGTGTTTGATGAAGTGACGTTCTCCGTCGTTGAGATTTTC 20183 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663 |||| | | ||||| || || |||||||| | ||||||||||| || || Sbjct 20182 CCAGTCACGGTTGTCTTGTGAGAGATCGACTTCTTCGGCGGTCCAGAAGGATGCTTCGGC 20123 Query 48664 TTTTTTGTACATGCCCCATATGTCCGGATAGT 48695 ||| |||||||| |||| || | || |||| Sbjct 20122 TTTCTTGTACATTTCCCAGATCTGTGGGTAGT 20091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931197739296000