Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq18099 91.5 3e-13
>seq18099
Length=159039
Score = 91.5 bits (100), Expect = 3e-13
Identities = 185/272 (68%), Gaps = 2/272 (1%)
Strand=Plus/Minus
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
|||||||| || || | |||||| |||||||| ||||| |||||||| || | || ||
Sbjct 20361 TACATCTCTGAATGGATATTCTCAATAGCGATTTGGAATCCGTAGAATGCACGCGCTTCG 20302
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGA 48543
| || || || |||| ||||| | ||| || || || || || || || ||
Sbjct 20301 GAGACTTGTACATCTGACATGAATCG-TGAAGCGAGGTTTTCGAGTACGATTCCGTCAGA 20243
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
|| || ||||| || || || ||||| | ||| || || || || | ||||| |
Sbjct 20242 TGCGGCGAAGAAAGCGAGTACGTGTTTGATGAAGTGACGTTCTCCGTCGTTGAGATTTTC 20183
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663
|||| | | ||||| || || |||||||| | ||||||||||| || ||
Sbjct 20182 CCAGTCACGGTTGTCTTGTGAGAGATCGACTTCTTCGGCGGTCCAGAAGGATGCTTCGGC 20123
Query 48664 TTTTTTGTACATGCCCCATATGTCCGGATAGT 48695
||| |||||||| |||| || | || ||||
Sbjct 20122 TTTCTTGTACATTTCCCAGATCTGTGGGTAGT 20091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931197739296000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |