Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_020867.1
Length=44892
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 563 2e-156
>seq11714
Length=14353
Score = 563 bits (624), Expect = 2e-156
Identities = 731/1005 (73%), Gaps = 4/1005 (0%)
Strand=Plus/Minus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || ||||||||| | || ||| | || |||||||| |||| ||||||
Sbjct 1438 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTT 1379
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGTTTTATTGTCGCTTTCAT 42398
||||| ||||||| |||| || | | | || || || ||||||| |||| |||||
Sbjct 1378 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCAT 1320
Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458
|||||| ||||| ||||| |||||||| |||||||||||||| ||||| |||||||| ||
Sbjct 1319 TGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTA 1260
Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518
|| ||||| || || || |||||| | | |||| | || ||||| | |||||
Sbjct 1259 CGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTT 1200
Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578
|| | ||||||||||| || |||| |||||||| ||||| ||||| |||||| |
Sbjct 1199 TTACCCAATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGA 1140
Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638
|| | || | ||||| | | ||| | | ||| |||| || || ||||||||
Sbjct 1139 ACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACT 1080
Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698
| | ||| || || ||| | || ||||| |||||| || || || ||||| || ||
Sbjct 1079 TAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGC 1020
Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758
|| ||||| || ||| | |||| ||| |||| ||||| |||||| ||||| |||||
Sbjct 1019 TGCAACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCC 960
Query 42759 TCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCT 42818
||| || || || ||||| |||||||| ||| | || ||||||||||| || ||||||||
Sbjct 959 TCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCT 900
Query 42819 TATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGC 42878
|||||| || || || ||| | || || || || ||||| || || || | || ||
Sbjct 899 TATGCACCCATTTCACATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCCCTATTTAGTGC 840
Query 42879 TATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCA 42938
|||||||||| | || || ||| | | | | ||||| || ||||| |||
Sbjct 839 TATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGC 780
Query 42939 AAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGG 42998
||| | || |||| ||||| ||||| || || |||||||||||||| || || |||||
Sbjct 779 TAATGAAGGTTACAGATTCGGACAAGAAGAAGAAACTTATAACATTGTAGCTGCTCATGG 720
Query 42999 TTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACT 43057
||| ||||| || | ||||| |||||||| | |||| || ||| ||| ||||| || |
Sbjct 719 TTATTTTGGCCGATTGATCTTTCAATATGC-TAGTTTCAACAATTCTCGTTCTTTACATT 661
Query 43058 TCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTA 43117
|||| | || |||||||| || || || |||||||| ||| || | || | || || |
Sbjct 660 TCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACCA 601
Query 43118 TGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATG 43177
|||| || ||| | |||||||| || || ||||||||| | ||||||| ||| | |
Sbjct 600 TGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGCG 541
Query 43178 TCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACG 43237
| || |||||||||||||||| | || ||||| |||||||| | || || ||||| |
Sbjct 540 TTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATG 481
Query 43238 AGCGGAATGCACATAACTTCCCGCTTGATCTTGCATCCGTGGAGG 43282
| || ||||| || |||||||| || || || || | || ||||
Sbjct 480 AACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGG 436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143483754393700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |