Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_020874.1
Length=46198
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 488 2e-133
>seq11714
Length=14353
Score = 488 bits (540), Expect = 2e-133
Identities = 698/983 (71%), Gaps = 0/983 (0%)
Strand=Plus/Plus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
|||| ||| || || ||||| ||||||||||| || ||||||||||| | || ||||||
Sbjct 447 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 506
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996
|| ||||| | | ||||||||| ||| || | ||| | | ||| ||||||||
Sbjct 507 GCACGGTTAATAATATCAGCCCAAGTATTAATAACGCGTCCTTGACTATCAACTACTGAT 566
Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056
||||| || || |||||||||||||| || ||||| |||| ||||| | || || | |
Sbjct 567 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACCTAAAGCAGTAAAC 626
Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116
|| || || || |||||||||| || | |||||||| | |||||| || || |||
Sbjct 627 CAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGAATTGTTGAAA 686
Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176
|| ||||| ||||| || |||| ||||| || || || ||||| ||||| ||||| ||
Sbjct 687 CTAGCATATTGAAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATGTTATAAGTT 746
Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236
||||| ||||| || || | || || | ||| || | | ||||| |||||
Sbjct 747 TCTTCTTCTTGTCCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 806
Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296
|| | ||||| ||||| || ||||||||| || || | || ||||| ||
Sbjct 807 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACA 866
Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356
|| || || || ||| || ||||||||||| || || || || || || ||||||||
Sbjct 867 CCCGCTACGCCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACA 926
Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416
| ||||||||| |||||||||||||| || |||||||| |||||| |||||| |||||
Sbjct 927 ATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 986
Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476
|| | || || | ||||| || || || || | | || |||| ||||||||||
Sbjct 987 CCAATTGGGTAGATCAAGAAAACAGCAGTTGCAGCTGCAACAGGAGCTGAATATGCAACA 1046
Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCT 26536
||||| || | ||| || || | | || |||||||||| | || |||
Sbjct 1047 GCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 1106
Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596
||||| || | ||| ||||| | | ||| |||| ||| || ||||| |||||||||||
Sbjct 1107 GCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAGCCAT 1166
Query 26597 TCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAG 26656
|| || | | ||||||||||||| ||||||||||| | || || || ||| |
Sbjct 1167 TCATCAACGGATGCAGCTTCCCAGATTGGGTAAAAATGCAAACCAATAGCTGCAGAAGTA 1226
Query 26657 GGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCA 26716
|| | | || ||||| || |||||||||||||| | | || || ||||| || |||
Sbjct 1227 GGAATAATGGCACCTGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGAAACAGGTTCA 1286
Query 26717 CGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAAACATGTAGTG 26776
|| || ||||| |||||||| || || || || ||||| || | |||||| | |||
Sbjct 1287 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGATAATAAAAACGGAAGTT 1346
Query 26777 GCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCTCA 26836
|| | | |||| || ||||| | || || |||||||| | || ||||| || |||
Sbjct 1347 GCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCA 1406
Query 26837 GTACTTGTAACCCACTCACAAAA 26859
|| || || | ||| | ||| ||
Sbjct 1407 GTGCTGGTTATCCAGTTACAGAA 1429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147661526348000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |