Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_020875.1
Length=182801
Score E
Sequences producing significant alignments: (Bits) Value
seq11714 560 1e-154
>seq11714
Length=14353
Score = 560 bits (620), Expect = 1e-154
Identities = 700/957 (73%), Gaps = 12/957 (1%)
Strand=Plus/Minus
Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070
|| ||||| |||||| | ||||||||| | | | | || || | || ||| ||
Sbjct 1387 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATC 1328
Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130
|| ||||||||||| ||||| ||||| |||||||||||||||||||| || |||| |||
Sbjct 1327 GCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 1268
Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190
| | || || ||||| || || || ||||| || | |||| ||| || ||||||
Sbjct 1267 CTTCTTTACGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGT 1208
Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250
| || || || || || |||||||| ||| | ||||||| ||| | ||||| || |||
Sbjct 1207 TTGCATTTTTACCCAATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGT 1148
Query 155251 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGT 155307
|||| |||| | || | ||||| | | || | ||| | | | ||||||
Sbjct 1147 CCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGT---AGCTTGTTATATGGGTCGT 1091
Query 155308 CAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 155367
||||||||||| || |||||| || |||||||||||||| ||||||||| || ||
Sbjct 1090 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 1031
Query 155368 CCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCT 155427
|| || | ||||| ||||| ||| | | || || | |||||||| ||| |||
Sbjct 1030 CCTGTTGCAGCTGCAACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCT 971
Query 155428 GATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAA 155487
|||| |||||||| || |||||||||||||| |||| |||| | || ||||| || ||
Sbjct 970 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAG 911
Query 155488 CACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCT 155547
||||| || ||||||||||| || |||||| | || ||||| ||||| ||||| || ||
Sbjct 910 CACAACATTCTTATGCACCCATTTCACATGTTAGGCGTAGCGGGTGTATTCGGCGGCTCC 851
Query 155548 CTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAG 155607
|| || ||||||||| ||||| ||||| || ||| | ||| | ||||| || ||
Sbjct 850 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAA 791
Query 155608 CAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTT 155667
| || ||| || | ||||||| ||||||||||||||||||||||||||||||||
Sbjct 790 AATGAATCTGCTAATGAAGGTTACAGATTCGGACAAGAAGAAGAAACTTATAACATTGTA 731
Query 155668 GCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGA 155727
||||||||||| || || || || | ||||| || ||||| |||||||| || |
Sbjct 730 GCTGCTCATGGTTATTTTGGCCGATTGATCTTTCAATATGCTAGTTTCAACAATTCTCGT 671
Query 155728 AGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGT 155787
| | || |||||| | || || ||||| || || | || ||| |||||| | |||
Sbjct 670 TCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGT 611
Query 155788 GTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCT 155847
| || ||||| |||||||| || |||||||| |||||||| || ||||| || |
Sbjct 610 ATTAGCACCATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGA---T 554
Query 155848 AGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATG 155904
||| || || || ||| ||||| || ||| ||||||| ||| |||||||||
Sbjct 553 AGTCAAGGACGCGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATG 494
Query 155905 GAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 155961
||||| ||||| || ||||| ||||||||||||||||| ||||| ||||||| ||||
Sbjct 493 GAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 584624842089000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |