Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq11714 590 7e-164 >seq11714 Length=14353 Score = 590 bits (654), Expect = 7e-164 Identities = 732/999 (73%), Gaps = 12/999 (1%) Strand=Plus/Plus Query 67349 AGACTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTC 67408 || |||| ||||||| ||||| ||||||||||||||||| ||||| || ||||||||||| Sbjct 434 AGCCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTC 493 Query 67409 CATTCCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGC 67468 ||| ||||| || | ||||| || || ||||||||| ||| || || Sbjct 494 CATACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACGCGTCCTTGACT 553 Query 67469 GTCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACC 67528 ||||| || ||||||||||| |||||||| || |||||||| ||||| || | ||| Sbjct 554 ATCAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTAATACC 613 Query 67529 CATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCT 67588 | ||||| ||||| || | || || || | || || | |||||| || | | | Sbjct 614 TAAAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACG 673 Query 67589 TGAGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAAC 67648 || ||||||||| ||||| || |||||||| || || || || ||||||||||| || Sbjct 674 AGAATTGTTGAAACTAGCATATTGAAAGATCAATCGGCCAAAATAACCATGAGCAGCTAC 733 Query 67649 AATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTC 67708 |||||| ||||| ||||||||||||||||| ||||||| | || || || | || Sbjct 734 AATGTTATAAGTTTCTTCTTCTTGTCCGAATCTGTAACCTTCATTAGCAGATTCATTTTC 793 Query 67709 AGTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGA 67768 || ||||| ||||| | | |||||| || | ||||| |||||||||||||| || || Sbjct 794 TGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGA 853 Query 67769 ACCACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTC 67828 || ||||||||||| ||||| || | ||| || |||||||||||||| ||||||||||| Sbjct 854 GCCGCCGAATACACCCGCTACGCCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTC 913 Query 67829 TGCTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGA 67888 || ||||| || | ||| |||| ||||||||||| || || |||||||| | ||||| Sbjct 914 AGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGA 973 Query 67889 GAAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGC 67948 ||| |||||||| | || |||| |||||| ||||| ||| || | || ||||| Sbjct 974 AAAACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTTGCAGCTGCAACAGGAGC 1033 Query 67949 AGAGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACG 68008 || ||||| ||| ||||||||||||||||| |||||| || ||||||||||| ||| Sbjct 1034 TGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACG 1093 Query 68009 ACC---ACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCC 68065 ||| | | | ||| | || | | ||||| | || | |||| |||| || Sbjct 1094 ACCCATATAACAAGCT---ACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACC 1150 Query 68066 ACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACC 68125 || || || | ||| ||||| | | ||| ||||||||||| || || || || | ||| Sbjct 1151 GCCGTTGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATTGGGTAAAAATGCAAACC 1210 Query 68126 GATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGA 68185 || || ||| |||||| || ||||| ||||| || ||||| ||||| | || || Sbjct 1211 AATAGCTGCAGAAGTAGGAATAATGGCACCTGAAATAATATTGTTTCCGTAAAGAAGAGA 1270 Query 68186 ACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAAT 68245 || | ||||||||| | |||||||| ||||| |||||||| || ||||||||||| || Sbjct 1271 TCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGAT 1330 Query 68246 GATGAA---GCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACC 68302 || || | |||| ||| | | ||| ||| |||||||| ||||| ||||| || Sbjct 1331 AATAAAAACGGAAGT---TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCC 1387 Query 68303 AACATAGATGCGATTGTCAACTGAGGTGACCCAGTTACA 68341 || || | ||||| ||| ||| | ||||||||| Sbjct 1388 AATGTAAAGACGATTTTCAGTGCTGGTTATCCAGTTACA 1426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566743276179000