Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq18065 134 3e-26
seq24711 127 4e-24
seq14351 125 1e-23
seq7697 118 2e-21
seq5576 118 2e-21
seq4225 116 7e-21
seq25505 114 3e-20
seq2313 114 3e-20
seq28288 113 9e-20
seq18044 113 9e-20
seq21545 102 2e-16
seq8442 102 2e-16
seq16226 100 6e-16
seq14839 98.7 2e-15
seq25811 86.0 1e-11
>seq18065
Length=21122
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417
|| ||||| | || ||||| |||| || | ||||||||| |||||||||||||||||
Sbjct 15058 TTGTAATCCGCAAAGGTTCGACCATCCTCAAGTTGTTTACCGGCAAAGATTAATCTCTGC 14999
Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477
|| || || || || |||||||||||||| || || ||| ||||| || | ||||
Sbjct 14998 TGGTCCGGAGGGATCCCTTCTTTATCTTGAATCTTCGCTTTAACATTGTCAATGGTATCT 14939
Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||| || |||||||| |||||||||||||| || | | || | ||||||||||||
Sbjct 14938 GACCTCTCAACTTCTAGGGTAATGGTTTTACCCGTAAGCGGCTTGACAAATATCTGCAT 14880
Score = 125 bits (138), Expect = 1e-23
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTT-AGAGATATTATAATC 192365
|| |||||||| ||||| | || ||||| | || | ||||| ||| || ||||||||
Sbjct 12636 ATTCCACCTCTCAGACGAAGCACCAAATGAAGGGTTGATTCTTTTAGA-ATGTTATAATC 12578
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
| ||| || || |||| || | |||||||| |||||||| | |||||| || || ||
Sbjct 12577 CGCTAAAGTCCGACCATCCTCGAGCTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGG 12518
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || |||||||||||||| || | || ||||| || | | ||| ||
Sbjct 12517 AGGGATCCCTTCTTTATCTTGAATCTCCGCCTTAACATTGTCAATGGTGTATGAGCTCTC 12458
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|||||||| |||||||||||||| || | || || | ||||||||||||
Sbjct 12457 AACTTCTAGGGTAATGGTTTTACCGGTAAGCGTCTTGACAAATATCTGCAT 12407
Score = 91.5 bits (100), Expect = 3e-13
Identities = 157/228 (69%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | ||||| | || | || | ||| | |||||| || || || || | |
Sbjct 12857 CCACCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCT 12798
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| ||||| |||| || | |||||| || ||||||||||| |||||||| || || ||
Sbjct 12797 AAAGTTCGACCATCCTCAAGTTGTTTTCCGGCAAAGATTAACCTCTGTTGGTCCGGAGGG 12738
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
||||| || ||||| || ||| ||| ||||| || | | ||| || |||
Sbjct 12737 ATTCC----TTGTCTTGAATCTTAGCTTTAACATTGTCAATTGTGTATGAACTCTCAACT 12682
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| | ||| ||||||| || || | || |||| ||| || ||||||
Sbjct 12681 TCCAAAGTTATGGTTTGGCCGGTAAGGGTCTTAACAAAAATTTGCATT 12634
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | | || ||||| | ||| | ||| || ||| || || ||
Sbjct 12408 ATACCACCTCTCAACCTGAGAACCAAATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCT 12349
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || |||| || | |||||| || |||||||| | ||||||||||| ||
Sbjct 12348 GCAAGAGTACGGCCATCTTCAAGTTGTTTTCCGGCAAAGATGAGCCTCTGTTGATCCGGA 12289
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
| |||||||| || ||||| || || |||||||| ||| | || || |||
Sbjct 12288 TGGATTCCTTCCTTGTCTTGAATCTTTGCCTTTACATTGTCTATTGTGTCGGAGCTTTCA 12229
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || || || | || || | ||| || |||||
Sbjct 12228 ACGTCAAGTGTTATGGTCTTGCCTGTAAGAGTCTTTACAAAGATTTGCAT 12179
>seq24711
Length=27656
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | ||||| || || ||||| | ||||| |||||| ||| || ||||||
Sbjct 4881 ATACCACCACGTAGACGCAACACCAAATGAAGAGTAGACTCTTTCTGGATGTTGTAATCA 4822
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || |||| | || || | || |||||||||||||| |||||||| || || ||
Sbjct 4821 GCCAAAGTTCTGCCGTCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCCGGA 4762
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| || || || ||||| |||| || || |||
Sbjct 4761 GGAATACCCTCTTTGTCTTGAATCTTGGCCTTCACATTGTCAATAGTGTCGGAGCTTTCA 4702
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | |||||| || || || || || || |||| ||| ||||||||
Sbjct 4701 ACTTCCAAAGTAATAGTCTTGCCCGTCAAGGTCTTAACAAAGATCTGCAT 4652
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | ||| | | || | ||| | ||||| ||| || |||||| |||||
Sbjct 4653 ATACCACCACGAAGCCTGAGCACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCC 4594
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || |||| || | ||| || ||||| || || || ||||| ||||| ||
Sbjct 4593 GCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGATCCGGA 4534
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| || || || ||||| || | ||| || ||
Sbjct 4533 GGAATACCTTCCTTATCTTGAATCTTGGCCTTAACATTGTCAATGGTATCAGAACTCTCC 4474
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || |||||||| ||||||||||| || || || | ||| ||||||||
Sbjct 4473 ACCTCAAGAGTAATAGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 4424
>seq14351
Length=15190
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | ||||| | || | || | ||| | |||||| || || || |||| |
Sbjct 4844 CCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCAGCT 4785
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
||||| || |||| || | ||||||||||| ||||||| ||||||||| || |||||
Sbjct 4784 AATGTCCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGGTCCGGTGGG 4725
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| ||||| || || || || || || |||||| || | ||| || ||| |||
Sbjct 4724 ATCCCTTCCTTGTCCTGAATCTTCGCCTTCACATTATCAATCGTATCCGAGCTTTCGACT 4665
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| ||||| ||||||||||| || || || || | | ||||||||||
Sbjct 4664 TCAAGAGTGATGGTTTTACCCGTCAAAGTCTTGACAGATATCTGCAT 4618
Score = 105 bits (116), Expect = 1e-17
Identities = 134/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414
|| |||||||||| | ||||| |||| || | |||||| |||| |||||| | |||
Sbjct 4571 ATGTTATAATCAGCAAGAGTTCGACCATCCTCAAGTTGTTTTCCAG-AAAGATGAGCCTC 4513
Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474
||||| || || || || ||||| || ||||| |||| | ||| ||||| || |
Sbjct 4512 TGTTGGTCCGGAGGGATCCCTTCCTTGTCTTGAATTT-AGCTTTAACATTGTCAATGGTG 4454
Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
||||| || |||||||| |||||||||||||| || | ||| || | ||| |||| |
Sbjct 4453 TCTGAGCTCTCGACTTCTAGGGTAATGGTTTTACCCGTGAGTGTCTTGACAAAGATCTAC 4394
Query 192535 AT 192536
||
Sbjct 4393 AT 4392
Score = 104 bits (114), Expect = 5e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || || || | || | ||| || ||| || ||||||
Sbjct 4165 ATACCACCTCTGAGACGAAGGACCAAGTGGAGTGTTGACTCCTTCTGGATGTTGTAATCA 4106
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || |||| || | |||||||| |||||||| || ||||| || || ||
Sbjct 4105 GCAAGAGTACGGCCATCCTCGAGCTGTTTACCGGCAAAGATCAACCTCTGCTGGTCCGGA 4046
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||||||||||||||| || ||| || ||| | || | || || |||
Sbjct 4045 GGGATTCCTTCTTTATCTTGAATCTTAGCCTTGACACTGTCAATTGTGTCGGAGCTTTCG 3986
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| ||||| || || || | || || | ||| || |||||
Sbjct 3985 ACCTCAAGAGTTATGGTCTTGCCTGTAAGAGTCTTTACAAAGATTTGCAT 3936
Score = 104 bits (114), Expect = 5e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| ||||| | | | || ||||| | ||| | ||| || ||| || |||||
Sbjct 4393 ATACCTCCTCTCAACCTGAGAACCAAATGGAGAGTTGACTCCTTCTGGATGTTGTAATCC 4334
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || || || |||| |||| || |||||||||||||| || || || || || ||
Sbjct 4333 GCTAGAGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAACCTTTGCTGGTCCGGA 4274
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| |||||||| |||||||| || || || || ||| || | ||||| |||
Sbjct 4273 GGAATTCCTTCCTTATCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCTGAACTTTCG 4214
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| |||||||| | || || | ||| ||||||||
Sbjct 4213 ACCTCAAGGGTTATGGTCTTACCAGTAAGAGTCTTGACAAAGATCTGCAT 4164
>seq7697
Length=17472
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || || || | ||||| |||||| ||| || || ||
Sbjct 10418 ATACCACCTCTGAGACGAAGCACCAAGTGGAGAGTAGACTCTTTTTGGATGTTGTAGTCT 10477
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | ||| || |||| || | || || || |||||||| | |||||| ||||| |||
Sbjct 10478 GCGAGTGTGCGACCATCCTCTAGCTGCTTCCCGGCAAAGATAAGTCTCTGCTGATCCGGT 10537
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| ||||| ||||| ||||| || |||||| || | ||||| ||
Sbjct 10538 GGGATTCCCTCTTTGTCTTGGATTTTGGCCTTGACATTATCGATTGTGTCTGAGCTCTCC 10597
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | ||| || ||||| ||||| | || || | ||| ||||||||
Sbjct 10598 ACCTCCAAAGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 10647
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| || || | || | ||| | |||||| ||| || |||||
Sbjct 10646 ATACCACCACGAAGACGCAAGACAAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAATCC 10705
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | |||| |||| || | ||| |||||||| ||||| | ||||| ||||| ||
Sbjct 10706 GCAAGAGTTCTCCCATCTTCAAGTTGCTTACCAGCGAAGATAAGCCTCTGCTGATCTGGA 10765
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || ||| ||| ||||| |||| || || ||
Sbjct 10766 GGAATACCTTCCTTGTCTTGGATCTTAGCTTTCACATTGTCAATAGTGTCGGAGCTCTCC 10825
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||||||||| || || || || || || | ||| ||||||||
Sbjct 10826 ACCTCAAGAGTAATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 10875
Score = 104 bits (114), Expect = 5e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | |||||| | || ||||| | ||| | || || ||| || ||||| |
Sbjct 9965 CCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCA 10024
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
| || | | |||| || | ||| ||||| || ||||| | |||||| ||||| || ||
Sbjct 10025 AGAGTCCTTCCATCTTCAAGTTGCTTACCTGCGAAGATAAGTCTCTGCTGATCCGGAGGA 10084
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| ||||| || || || || ||| || ||||| ||| | ||||| || ||
Sbjct 10085 ATCCCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACC 10144
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||||||||||||||| | || || | |||||||||||
Sbjct 10145 TCAAGGGTAATGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 10191
Score = 104 bits (114), Expect = 5e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | || | || || || || || | || || |||||| || ||
Sbjct 11102 ATACCACCTCTCAATCGGAGAACCAAGTGCAAGGTTGATTCCTTCTGGATATTGTAGTCT 11161
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || || || |||| || | ||||||||||| ||||| ||||| || ||||| ||
Sbjct 11162 GCCAAAGTACGGCCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGA 11221
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || || || || ||| || |||||| |||| || || ||
Sbjct 11222 GGAATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATAGTGTCAGAGCTCTCG 11281
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| ||||| || ||||| | |||||| | ||||| |||||
Sbjct 11282 ACCTCGAGAGTTATGGTCTTTCCAGTAAGTGTTTTCACGAATATTTGCAT 11331
>seq5576
Length=16168
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||||| | || | || | || | |||||| ||||| |||||||
Sbjct 570 ACCACCACGGAGACGGAGAACAAGGTGAAGTGTTGACTCTTTCTGAATATTGTAATCAGC 629
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| || || |||| || | || || || |||||||||| |||||||| || |||||
Sbjct 630 TAAAGTCCGACCATCTTCTAGCTGCTTCCCGGCAAAGATTAGCCTCTGTTGGTCCGGTGG 689
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| |||||||| |||||||| || || || ||| || | ||| || |||||
Sbjct 690 AATCCCTTCTTTGTCTTGTATCTTTGCCTTCACGTTATCAATCGTATCAGAGCTCTCTAC 749
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| |||||||||||||| || || || ||||| | ||| || |||||
Sbjct 750 CTCAAGAGTAATGGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCAT 797
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | |||||||| || | || | |||| ||| || |||||| |||||
Sbjct 796 ATCCCACCACGAAGACGTAGCACAAGGTGAAGTGTAGACTCCTTTTGGATATTGTAATCC 855
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || |||| || | ||||||||||| ||||| | ||||||||| || ||
Sbjct 856 GCAAGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATCAGTCTCTGTTGGTCCGGA 915
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
| || ||||| || ||||| || || || || || || | ||||| ||
Sbjct 916 GTGATCCCTTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCA 975
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| ||||||||||| |||||||| ||||| | ||| || |||||
Sbjct 976 ACTTCTAAGGTAATGGTTTTGCCAGTTAAGGTTTTCACAAAGATTTGCAT 1025
Score = 100 bits (110), Expect = 6e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
|||||| ||||| | | || || |||| || | |||||||| |||||||| | ||
Sbjct 1071 GATATTGTAATCCGCAAGAGTACGGCCATCCTCTAGCTGTTTACCGGCAAAGATAAGCCT 1130
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|||||| || || || ||||||||||||||||| || || || || || || |
Sbjct 1131 CTGTTGGTCCGGAGGGATTCCTTCTTTATCTTGAATCTTGGCCTTGACGTTGTCAATGGT 1190
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
||||| ||| || || || || |||||||| ||||||| ||||| | ||| || ||
Sbjct 1191 GTCTGAGCTTTCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGGTTTTCACAAAGATTTG 1250
Query 192534 CAT 192536
|||
Sbjct 1251 CAT 1253
>seq4225
Length=52512
Score = 116 bits (128), Expect = 7e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
|| ||||| | |||| || ||||| | || | ||||| ||| || |||||||
Sbjct 2735 CCTCCTCTTAATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGTTGTAATCAGCG 2794
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
| ||||| | | || || ||||||||||| |||||||| || | || || || |||||
Sbjct 2795 AGTGTTCTTCCGTCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCCGGTGGA 2854
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|||||||| || ||||| || || ||| ||||| || | || || ||||| ||
Sbjct 2855 ATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCGATTGTGTCCGAAGATTCAACC 2914
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
||||| || || || || || |||| ||||| | || ||||||||||
Sbjct 2915 TCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTT 2963
>seq25505
Length=75187
Score = 114 bits (126), Expect = 3e-20
Identities = 110/141 (78%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
|| || ||||| | || || ||||| | ||| | |||||| ||||| || || | |
Sbjct 56734 CCTCCCCTAAGCCTCAAGACCAAATGAAGAGTCGACTCTTTCTGAATATTGTAGTCCGCT 56675
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
| |||||| |||| || | |||||||||||||||||| |||||||||||||| ||||||
Sbjct 56674 AGTGTTCGGCCATCTTCAAGTTGTTTACCAGCAAAGATCAATCTCTGTTGATCTGGTGGT 56615
Query 192430 ATTCCTTCTTTATCTTGTATT 192450
||||| ||||| || ||| ||
Sbjct 56614 ATTCCCTCTTTGTCCTGTTTT 56594
>seq2313
Length=70781
Score = 114 bits (126), Expect = 3e-20
Identities = 108/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
|||||||| || | || || | ||| | ||||| |||||| ||| || ||||||| |
Sbjct 4693 CCACCTCTGAGCCTCAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCT 4752
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| ||||| |||| || | ||| ||||||||||| || | ||||||||||||||||||
Sbjct 4753 AAGGTTCGACCATCTTCAAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGATCAGGTGGT 4812
Query 192430 ATTCCTTCTTTATCTTGT 192447
|| |||||||| || |||
Sbjct 4813 ATACCTTCTTTGTCCTGT 4830
>seq28288
Length=9629
Score = 113 bits (124), Expect = 9e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | ||||| | || | || | ||| | |||||| || || || || | |
Sbjct 4845 CCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTGTAGTCCGCT 4786
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
||||| || |||| || | |||||||||||| ||||| | |||||| || || || ||
Sbjct 4785 AATGTCCGACCATCCTCGAGTTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGG 4726
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| ||||| || ||||| || || || || || |||| ||||| || |||
Sbjct 4725 ATCCCTTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCAATAGTGTCTGAGTTCTCAACT 4666
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| ||||| ||||||||||| | ||||| | ||| ||||||||
Sbjct 4665 TCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAAAGATCTGCAT 4619
>seq18044
Length=6213
Score = 113 bits (124), Expect = 9e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | | || ||||| | || | || || || || |||||
Sbjct 3075 ATACCACCTCTCAACCTGAGAACCAAATGCAGGGTTGATTCCTTCTGAATGTTGTAATCT 3134
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | ||||| |||| || | |||||||| |||||||| | ||||| || || ||
Sbjct 3135 GCAAGGGTTCGACCATCCTCGAGCTGTTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGA 3194
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| |||||||| || ||||| |||||| ||| ||||| || | ||||| ||
Sbjct 3195 GGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCG 3254
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|||||||| ||||| ||||||||||| | || || | ||||||||||||
Sbjct 3255 ACTTCTAGGGTAATTGTTTTACCAGTAAGAGTCTTGACAAATATCTGCAT 3304
Score = 96.9 bits (106), Expect = 7e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || ||||||| || || || |||| || | |||||||||||||| || | |||
Sbjct 3350 GATGTTGTAATCAGCCAAGGTACGGCCATCCTCAAGCTGTTTACCAGCAAAAATCAGTCT 3409
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
||| || || || || |||||||| |||||||| || || || || || || |
Sbjct 3410 CTGCTGGTCCGGAGGGATTCCTTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGT 3469
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
||||| ||| || || || || ||||| || ||||| | || |||| ||| |||||
Sbjct 3470 GTCTGAACTTTCGACCTCAAGGGTTATGGTCTTGCCAGTAAGAGTCTTAACAAAGATCTG 3529
Query 192534 CAT 192536
|||
Sbjct 3530 CAT 3532
>seq21545
Length=15879
Score = 102 bits (112), Expect = 2e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| ||||| | || || ||||| | ||| |||||| |||||| || || | |
Sbjct 15051 CCACCCCTAAGCCTCAAGACCAAATGAAGAGTCAACTCTTTCTGGATATTGTAGTCCGCT 15110
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
||||||| | || || | | | ||||||||||||| ||| |||||||||||||||||
Sbjct 15111 AATGTTCCACCGTCTTCTAGCTCTATACCAGCAAAGATCAATATCTGTTGATCAGGTGGT 15170
Query 192430 ATTCCTTCTTTATCTTGTATT 192450
||||| ||||| || ||| ||
Sbjct 15171 ATTCCCTCTTTGTCATGTTTT 15191
>seq8442
Length=60656
Score = 102 bits (112), Expect = 2e-16
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| | ||||| || ||||| | ||| | || || ||||| |||||
Sbjct 43802 ATTCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCT 43861
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| ||||| | || || | |||||||||||| ||||| | ||||||| || ||
Sbjct 43862 CCAAGGGTTCGACCGTCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCTGGA 43921
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| || || || || | || | ||||| ||
Sbjct 43922 GGGATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGGTGTCTGAGCTCTCA 43981
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||||| ||||| ||||||||||| | |||||| | || ||| ||||||
Sbjct 43982 ACTTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAACTATTTGCATT 44032
>seq16226
Length=39664
Score = 100 bits (110), Expect = 6e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| || || || || | ||||| ||| || ||| || || ||
Sbjct 11591 ATACCACCACGAAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCT 11650
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || |||| || | || || || |||||||| || ||||| || || ||
Sbjct 11651 GCAAGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCCGGA 11710
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| || || ||| || || || | ||||| ||
Sbjct 11711 GGAATACCCTCTTTGTCTTGAATCTTGGCTTTCACGTTGTCGATGGTGTCTGAGCTCTCA 11770
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||||||||| |||||||| || || || | || ||||||||
Sbjct 11771 ACCTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 11820
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| || | ||||| || || || || | || | ||| || ||| || || |||
Sbjct 11363 ATACCTCCACGTAGACGCAACACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCA 11422
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || |||| || | || || ||||| ||||| || || || || || |||
Sbjct 11423 GCAAGAGTGCGACCATCTTCAAGCTGCTTTCCAGCGAAGATCAACCTTTGCTGGTCCGGT 11482
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| ||||| || || || || | ||||| ||
Sbjct 11483 GGGATTCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCC 11542
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || ||||| || ||||||||||| || || | ||| ||||||||
Sbjct 11543 ACCTCGAGGGTAATAGTCTTACCAGTTAAGGTCTTGACAAAGATCTGCAT 11592
>seq14839
Length=23228
Score = 98.7 bits (108), Expect = 2e-15
Identities = 116/157 (74%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| || | || |||||||| ||||| | ||| ||||| || ||||| || |||| |
Sbjct 10162 CATCTTCGAGCTGCTTACCAGCGAAGATGAGTCTATGTTGGTCCGGTGGGATCTCTTCCT 10221
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
|||| || || ||| |||||| ||| || | ||||| ||| || || |||||||
Sbjct 10222 TATCATGAATCTTAGCTTTTACGTTATCGATTGTGTCTGAGCTTTCGACCTCAAGAGTAA 10281
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|||||||||| || | || || | ||| ||||||||
Sbjct 10282 TGGTTTTACCGGTAAGGGTCTTCACAAAAATCTGCAT 10318
>seq25811
Length=7539
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| |||||||||||||| |||||||| | ||||| || || || || |||||||| |
Sbjct 407 CATCCTCCAATTGTTTACCCGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATTCCTTCCT 348
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
||||||| || || || ||||| |||| ||||| ||| || | || || |
Sbjct 347 TATCTTGGATCTTTGCCTTGACATTGTCAATAGTGTCTGAACTTTCGACCTTAAGGGTTA 288
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
|||| || || || | || || ||||| || |||
Sbjct 287 TGGTCTTGCCTGTAAGAGTCTTTATAAAGATTTGC 253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984117042221250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |