Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04]
28,775 sequences; 199,120,032 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq18065 125 1e-23
seq24711 118 2e-21
seq4225 116 7e-21
seq18044 113 8e-20
seq5576 113 8e-20
seq14351 109 1e-18
seq8442 105 1e-17
seq7697 104 4e-17
seq28288 102 1e-16
seq16226 100 5e-16
seq25505 98.7 2e-15
seq14839 96.9 6e-15
seq2313 96.9 6e-15
seq21545 84.2 4e-11
>seq18065
Length=21122
Score = 125 bits (138), Expect = 1e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 171891 TTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGT 171950
|| ||||| | || | ||| | || || | ||||||||| ||||| |||||||||||
Sbjct 15058 TTGTAATCCGCAAAGGTTCGACCATCCTCAAGTTGTTTACCGGCAAAGATTAATCTCTGC 14999
Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010
||||| || || || |||||||||||||| || || ||| ||||| || ||||||
Sbjct 14998 TGGTCCGGAGGGATCCCTTCTTTATCTTGAATCTTCGCTTTAACATTGTCAATGGTATCT 14939
Query 172011 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||| || |||||||| |||||||||||||| || | | || | |||||||||||
Sbjct 14938 GACCTCTCAACTTCTAGGGTAATGGTTTTACCCGTAAGCGGCTTGACAAATATCTGCAT 14880
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || || | || ||||| | || | ||||| ||| ||||||||
Sbjct 12636 ATTCCACCTCTCAGACGAAGCACCAAATGAAGGGTTGATTCTTTTAGAATGTTATAATCC 12577
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| ||||| || | || || | |||||||| ||||| || | |||||| ||||| ||
Sbjct 12576 GCTAAAGTCCGACCATCCTCGAGCTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGA 12517
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| || | || ||||| || || | ||| ||
Sbjct 12516 GGGATCCCTTCTTTATCTTGAATCTCCGCCTTAACATTGTCAATGGTGTATGAGCTCTCA 12457
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|||||||| |||||||||||||| || | || || | |||||||||||
Sbjct 12456 ACTTCTAGGGTAATGGTTTTACCGGTAAGCGTCTTGACAAATATCTGCAT 12407
Score = 87.8 bits (96), Expect = 3e-12
Identities = 139/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 171872 AGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACC 171931
||| | |||||| ||| || || || | ||||| ||| | || || | |||||| ||
Sbjct 12828 AGTTGACTCTTTCTGAATGTTGTAGTCCGCTAAAGTTCGACCATCCTCAAGTTGTTTTCC 12769
Query 171932 AGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 171991
||||| ||||| ||||||||||| || || ||||| || ||||| || ||| |||
Sbjct 12768 GGCAAAGATTAACCTCTGTTGGTCCGGAGGGATTCC----TTGTCTTGAATCTTAGCTTT 12713
Query 171992 TACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 172051
||||| || || | ||| || ||||| | ||| ||||||| || || | ||
Sbjct 12712 AACATTGTCAATTGTGTATGAACTCTCAACTTCCAAAGTTATGGTTTGGCCGGTAAGGGT 12653
Query 172052 TTTAATGAATATCTGCATT 172070
|||| || || ||||||
Sbjct 12652 CTTAACAAAAATTTGCATT 12634
>seq24711
Length=27656
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || || || ||||| | ||||| |||||| || || |||||
Sbjct 4881 ATACCACCACGTAGACGCAACACCAAATGAAGAGTAGACTCTTTCTGGATGTTGTAATCA 4822
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| |||| || |||| || | || ||||||||||| || |||||||| ||||| ||
Sbjct 4821 GCCAAAGTTCTGCCGTCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCCGGA 4762
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||| || || || ||||| ||||| || || |||
Sbjct 4761 GGAATACCCTCTTTGTCTTGAATCTTGGCCTTCACATTGTCAATAGTGTCGGAGCTTTCA 4702
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | |||||| || || || || || || |||| || ||||||||
Sbjct 4701 ACTTCCAAAGTAATAGTCTTGCCCGTCAAGGTCTTAACAAAGATCTGCAT 4652
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| | | || | ||| | ||||| ||| || ||||| |||||
Sbjct 4653 ATACCACCACGAAGCCTGAGCACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCC 4594
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || || | ||| || ||||| ||||| || ||||| || || ||
Sbjct 4593 GCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGATCCGGA 4534
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || || || ||||| || ||||| || ||
Sbjct 4533 GGAATACCTTCCTTATCTTGAATCTTGGCCTTAACATTGTCAATGGTATCAGAACTCTCC 4474
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || |||||||| ||||||||||| || || || | || ||||||||
Sbjct 4473 ACCTCAAGAGTAATAGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 4424
>seq4225
Length=52512
Score = 116 bits (128), Expect = 7e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
|| ||||| | ||||| || ||||| | || | ||||| || || ||||| |
Sbjct 2735 CCTCCTCTTAATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGTTGTAATCAGCG 2794
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
| | || | |||| || ||||||||||| ||||| || || | || ||||| |||||
Sbjct 2795 AGTGTTCTTCCGTCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCCGGTGGA 2854
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
|||||||| || ||||| || || ||| ||||| || || || || ||||| ||
Sbjct 2855 ATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCGATTGTGTCCGAAGATTCAACC 2914
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT 172071
||||| || || || || || |||| ||||| | ||| ||||||||||
Sbjct 2915 TCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTT 2963
>seq18044
Length=6213
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | | | || ||||| | || | || || ||| || ||||||
Sbjct 3075 ATACCACCTCTCAACCTGAGAACCAAATGCAGGGTTGATTCCTTCTGAATGTTGTAATCT 3134
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | | ||| | || || | |||||||| ||||| || | ||||| ||||| ||
Sbjct 3135 GCAAGGGTTCGACCATCCTCGAGCTGTTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGA 3194
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| || ||||| |||||| ||| ||||| || || ||||| ||
Sbjct 3195 GGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCG 3254
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|||||||| ||||| ||||||||||| | || || | |||||||||||
Sbjct 3255 ACTTCTAGGGTAATTGTTTTACCAGTAAGAGTCTTGACAAATATCTGCAT 3304
Score = 93.3 bits (102), Expect = 8e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983
||||||||||||||||| | |||||| ||||| || || |||||||| |||||||| ||
Sbjct 3387 TGTTTACCAGCAAAAATCAGTCTCTGCTGGTCCGGAGGGATTCCTTCCTTATCTTGGATC 3446
Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043
|| || || || || || ||||| ||| || || || || ||||| || |||
Sbjct 3447 TTGGCCTTGACGTTGTCAATGGTGTCTGAACTTTCGACCTCAAGGGTTATGGTCTTGCCA 3506
Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069
|| | || |||| || ||||||||
Sbjct 3507 GTAAGAGTCTTAACAAAGATCTGCAT 3532
>seq5576
Length=16168
Score = 113 bits (124), Expect = 8e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 171878 CTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAA 171937
|||||| |||||| ||||| | ||||| || | || || | || || || |||||
Sbjct 606 CTCTTTCTGAATATTGTAATCAGCTAAAGTCCGACCATCTTCTAGCTGCTTCCCGGCAAA 665
Query 171938 AATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 171997
|||| ||||||||||| ||||| || |||||||| |||||||| || || || ||
Sbjct 666 GATTAGCCTCTGTTGGTCCGGTGGAATCCCTTCTTTGTCTTGTATCTTTGCCTTCACGTT 725
Query 171998 AGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 172057
| || ||||| || ||||| || |||||||||||||| || || || ||||| |
Sbjct 726 ATCAATCGTATCAGAGCTCTCTACCTCAAGAGTAATGGTTTTCCCTGTCAAAGTTTTGAC 785
Query 172058 GAATATCTGCAT 172069
|| || |||||
Sbjct 786 AAAGATTTGCAT 797
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| |||| || | || | |||| ||| || ||||| |||||
Sbjct 796 ATCCCACCACGAAGACGTAGCACAAGGTGAAGTGTAGACTCCTTTTGGATATTGTAATCC 855
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || || | ||||||||||| || || | |||||||||||| ||
Sbjct 856 GCAAGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATCAGTCTCTGTTGGTCCGGA 915
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
| || ||||| || ||||| || || || || || || || ||||| ||
Sbjct 916 GTGATCCCTTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCA 975
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| ||||||||||| |||||||| ||||| | || || |||||
Sbjct 976 ACTTCTAAGGTAATGGTTTTGCCAGTTAAGGTTTTCACAAAGATTTGCAT 1025
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||| ||||| | | || || | || || | |||||||| ||||| || | |||
Sbjct 1072 ATATTGTAATCCGCAAGAGTACGGCCATCCTCTAGCTGTTTACCGGCAAAGATAAGCCTC 1131
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|||||||| || || ||||||||||||||||| || || || || || || ||
Sbjct 1132 TGTTGGTCCGGAGGGATTCCTTCTTTATCTTGAATCTTGGCCTTGACGTTGTCAATGGTG 1191
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
||||| ||| || || || || |||||||| ||||||| ||||| | || || |||
Sbjct 1192 TCTGAGCTTTCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGGTTTTCACAAAGATTTGC 1251
Query 172068 AT 172069
||
Sbjct 1252 AT 1253
>seq14351
Length=15190
Score = 109 bits (120), Expect = 1e-18
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 171872 AGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACC 171931
||| | |||||| ||| || || || | ||| | || | || || | ||||||||
Sbjct 4815 AGTTGACTCTTTCTGAATGTTGTAGTCAGCTAATGTCCGACCATCCTCGAGCTGTTTACC 4756
Query 171932 AGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 171991
||| || |||| |||||||||||| ||||| || ||||| || || || || || ||
Sbjct 4755 AGCGAAGATTAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGAATCTTCGCCTT 4696
Query 171992 TACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 172051
|||||| || ||||| || ||| ||||| ||||| ||||||||||| || || ||
Sbjct 4695 CACATTATCAATCGTATCCGAGCTTTCGACTTCAAGAGTGATGGTTTTACCCGTCAAAGT 4636
Query 172052 TTTAATGAATATCTGCAT 172069
|| | ||||||||||
Sbjct 4635 CTTGACAGATATCTGCAT 4618
Score = 98.7 bits (108), Expect = 2e-15
Identities = 133/183 (73%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| |||||||| | | || ||| | || || | |||||| |||| ||| || | ||
Sbjct 4572 AATGTTATAATCAGCAAGAGTTCGACCATCCTCAAGTTGTTTTCCAG-AAAGATGAGCCT 4514
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||||||||| || || || ||||| || ||||| |||| | ||| ||||| || ||
Sbjct 4513 CTGTTGGTCCGGAGGGATCCCTTCCTTGTCTTGAATTT-AGCTTTAACATTGTCAATGGT 4455
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||||| || |||||||| |||||||||||||| || | ||| || | || ||||
Sbjct 4454 GTCTGAGCTCTCGACTTCTAGGGTAATGGTTTTACCCGTGAGTGTCTTGACAAAGATCTA 4395
Query 172067 CAT 172069
|||
Sbjct 4394 CAT 4392
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| ||||| | | | || ||||| | ||| | ||| || || || |||||
Sbjct 4393 ATACCTCCTCTCAACCTGAGAACCAAATGGAGAGTTGACTCCTTCTGGATGTTGTAATCC 4334
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || || || | || |||| || ||||||||||| || || || || ||||| ||
Sbjct 4333 GCTAGAGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAACCTTTGCTGGTCCGGA 4274
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| |||||||| || || || || ||| || || ||||| |||
Sbjct 4273 GGAATTCCTTCCTTATCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCTGAACTTTCG 4214
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || ||||| |||||||| | || || | || ||||||||
Sbjct 4213 ACCTCAAGGGTTATGGTCTTACCAGTAAGAGTCTTGACAAAGATCTGCAT 4164
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || || | || || || | || | ||| || || || |||||
Sbjct 4165 ATACCACCTCTGAGACGAAGGACCAAGTGGAGTGTTGACTCCTTCTGGATGTTGTAATCA 4106
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || || | |||||||| ||||| || || ||||| ||||| ||
Sbjct 4105 GCAAGAGTACGGCCATCCTCGAGCTGTTTACCGGCAAAGATCAACCTCTGCTGGTCCGGA 4046
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||||||||||||||| || ||| || ||| | || || || || |||
Sbjct 4045 GGGATTCCTTCTTTATCTTGAATCTTAGCCTTGACACTGTCAATTGTGTCGGAGCTTTCG 3986
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||| ||||| || || || | || || | || || |||||
Sbjct 3985 ACCTCAAGAGTTATGGTCTTGCCTGTAAGAGTCTTTACAAAGATTTGCAT 3936
>seq8442
Length=60656
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| | |||| || ||||| | ||| | || || |||||| ||||||
Sbjct 43802 ATTCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCT 43861
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | ||| |||| || | |||||||||||| || || | ||||||| ||| ||
Sbjct 43862 CCAAGGGTTCGACCGTCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCTGGA 43921
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || || || || | || || ||||| ||
Sbjct 43922 GGGATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGGTGTCTGAGCTCTCA 43981
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||||| ||||| ||||||||||| | |||||| | | ||| ||||||
Sbjct 43982 ACTTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAACTATTTGCATT 44032
>seq7697
Length=17472
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | ||| | || || || || || | || || ||||| || |||
Sbjct 11102 ATACCACCTCTCAATCGGAGAACCAAGTGCAAGGTTGATTCCTTCTGGATATTGTAGTCT 11161
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| |||| || | || || | ||||||||||| || || ||||| || || || ||
Sbjct 11162 GCCAAAGTACGGCCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGA 11221
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || || || || ||| || |||||| ||||| || || ||
Sbjct 11222 GGAATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATAGTGTCAGAGCTCTCG 11281
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||| ||||| || ||||| | |||||| | |||||| |||||
Sbjct 11282 ACCTCGAGAGTTATGGTCTTTCCAGTAAGTGTTTTCACGAATATTTGCAT 11331
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || || | || || || | ||||| |||||| || || || |||
Sbjct 10418 ATACCACCTCTGAGACGAAGCACCAAGTGGAGAGTAGACTCTTTTTGGATGTTGTAGTCT 10477
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | | || | || || | || || || ||||| || | |||||| || || |||
Sbjct 10478 GCGAGTGTGCGACCATCCTCTAGCTGCTTCCCGGCAAAGATAAGTCTCTGCTGATCCGGT 10537
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| ||||| ||||| ||||| || |||||| || || ||||| ||
Sbjct 10538 GGGATTCCCTCTTTGTCTTGGATTTTGGCCTTGACATTATCGATTGTGTCTGAGCTCTCC 10597
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || | ||| || ||||| ||||| | || || | || ||||||||
Sbjct 10598 ACCTCCAAAGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 10647
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || || || | || | ||| | |||||| || || |||||
Sbjct 10646 ATACCACCACGAAGACGCAAGACAAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAATCC 10705
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || || | ||| |||||||| || || | ||||| || || ||
Sbjct 10706 GCAAGAGTTCTCCCATCTTCAAGTTGCTTACCAGCGAAGATAAGCCTCTGCTGATCTGGA 10765
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || ||| ||| ||||| ||||| || || ||
Sbjct 10766 GGAATACCTTCCTTGTCTTGGATCTTAGCTTTCACATTGTCAATAGTGTCGGAGCTCTCC 10825
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||||||||| || || || || || || | || ||||||||
Sbjct 10826 ACCTCAAGAGTAATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 10875
Score = 89.7 bits (98), Expect = 9e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
||||| | ||| || | || ||||| | ||| | || || || || ||||| |
Sbjct 9965 CCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCA 10024
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
| || | | | || || | ||| ||||| || || || | |||||| || || || ||
Sbjct 10025 AGAGTCCTTCCATCTTCAAGTTGCTTACCTGCGAAGATAAGTCTCTGCTGATCCGGAGGA 10084
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
|| ||||| || || || || ||| || ||||| ||| || ||||| || ||
Sbjct 10085 ATCCCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACC 10144
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||||||||||||||| | || || | ||||||||||||
Sbjct 10145 TCAAGGGTAATGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 10191
>seq28288
Length=9629
Score = 102 bits (112), Expect = 1e-16
Identities = 174/250 (70%), Gaps = 3/250 (1%)
Strand=Plus/Minus
Query 171822 ATACTTTTTAGTTTCATAA--TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCT 171879
||| ||| ||||| || || | ||||| | || || | || | || | ||| | ||
Sbjct 4867 ATAGTTTCTAGTT-CAGAAGCTTCCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACT 4809
Query 171880 CTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAA 171939
|||| ||| || || || | ||| | || | || || | |||||||||||| || |
Sbjct 4808 CTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCCTCGAGTTGTTTACCAGCGAAGA 4749
Query 171940 TTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 171999
| | |||||| ||||| || || || ||||| || ||||| || || || || ||
Sbjct 4748 TGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGAATCTTCGCCTTGACGTTGT 4689
Query 172000 TTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGA 172059
||||| ||||| || |||||||| ||||| ||||||||||| | ||||| | |
Sbjct 4688 CAATAGTGTCTGAGTTCTCAACTTCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAA 4629
Query 172060 ATATCTGCAT 172069
| ||||||||
Sbjct 4628 AGATCTGCAT 4619
>seq16226
Length=39664
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || || || || || | ||||| ||| || || || || |||
Sbjct 11591 ATACCACCACGAAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCT 11650
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || || | || || || ||||| || || ||||| ||||| ||
Sbjct 11651 GCAAGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCCGGA 11710
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||| || || ||| || || || || ||||| ||
Sbjct 11711 GGAATACCCTCTTTGTCTTGAATCTTGGCTTTCACGTTGTCGATGGTGTCTGAGCTCTCA 11770
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||||||||| |||||||| || || || | ||| ||||||||
Sbjct 11771 ACCTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 11820
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || || || || || | || | ||| || ||| || || ||
Sbjct 11135 ATACCACCACGAAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCG 11194
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| ||| | || | || || | || || ||||||||||| | | ||| ||||| ||
Sbjct 11195 GCTAAGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGA 11254
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| || || || || || || || ||||| ||||| ||
Sbjct 11255 GGGATACCTTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTCA 11314
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || |||||||| |||||||| || || || | ||| || |||||
Sbjct 11315 ACCTCAAGGGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 11364
>seq25505
Length=75187
Score = 98.7 bits (108), Expect = 2e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894
|||| | || || ||||| | || || ||||| | ||| | |||||| |||||| |
Sbjct 56742 TCATGGTTCCTCCCCTAAGCCTCAAGACCAAATGAAGAGTCGACTCTTTCTGAATATTGT 56683
Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954
| || | || | ||| | || || | ||||||||||||||| || ||||||||||| |
Sbjct 56682 AGTCCGCTAGTGTTCGGCCATCTTCAAGTTGTTTACCAGCAAAGATCAATCTCTGTTGAT 56623
Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATT 171983
| ||||||||||| ||||| || ||| ||
Sbjct 56622 CTGGTGGTATTCCCTCTTTGTCCTGTTTT 56594
>seq14839
Length=23228
Score = 96.9 bits (106), Expect = 6e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983
|| |||||||| || || | ||| |||||||| ||||| || |||| ||||| || ||
Sbjct 10173 TGCTTACCAGCGAAGATGAGTCTATGTTGGTCCGGTGGGATCTCTTCCTTATCATGAATC 10232
Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043
||| |||||| ||| || || ||||| ||| || || |||||||||||||||||
Sbjct 10233 TTAGCTTTTACGTTATCGATTGTGTCTGAGCTTTCGACCTCAAGAGTAATGGTTTTACCG 10292
Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069
|| | || || | || ||||||||
Sbjct 10293 GTAAGGGTCTTCACAAAAATCTGCAT 10318
>seq2313
Length=70781
Score = 96.9 bits (106), Expect = 6e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894
|||| | |||||||| || | || || | ||| | ||||| |||||| || || |
Sbjct 4685 TCATGGTTCCACCTCTGAGCCTCAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGT 4744
Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954
|||| | ||| | ||| | || || | ||| |||||||||||||| | |||||||| |
Sbjct 4745 AATCAGCTAAGGTTCGACCATCTTCAAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGAT 4804
Query 171955 CAGGTGGTATTCCTTCTTTATCTTGT 171980
|||||||||| |||||||| || |||
Sbjct 4805 CAGGTGGTATACCTTCTTTGTCCTGT 4830
>seq21545
Length=15879
Score = 84.2 bits (92), Expect = 4e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894
|||| | ||||| ||||| | || || ||||| | ||| |||||| ||||| |
Sbjct 15043 TCATGGTTCCACCCCTAAGCCTCAAGACCAAATGAAGAGTCAACTCTTTCTGGATATTGT 15102
Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954
| || | ||| | || |||| || | | | |||||||||| || ||| ||||||| |
Sbjct 15103 AGTCCGCTAATGTTCCACCGTCTTCTAGCTCTATACCAGCAAAGATCAATATCTGTTGAT 15162
Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATT 171983
||||||||||||| ||||| || ||| ||
Sbjct 15163 CAGGTGGTATTCCCTCTTTGTCATGTTTT 15191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904810433895000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |