Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq18065 125 1e-23 seq24711 118 2e-21 seq4225 116 7e-21 seq18044 113 8e-20 seq5576 113 8e-20 seq14351 109 1e-18 seq8442 105 1e-17 seq7697 104 4e-17 seq28288 102 1e-16 seq16226 100 5e-16 seq25505 98.7 2e-15 seq14839 96.9 6e-15 seq2313 96.9 6e-15 seq21545 84.2 4e-11 >seq18065 Length=21122 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 171891 TTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGT 171950 || ||||| | || | ||| | || || | ||||||||| ||||| ||||||||||| Sbjct 15058 TTGTAATCCGCAAAGGTTCGACCATCCTCAAGTTGTTTACCGGCAAAGATTAATCTCTGC 14999 Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010 ||||| || || || |||||||||||||| || || ||| ||||| || |||||| Sbjct 14998 TGGTCCGGAGGGATCCCTTCTTTATCTTGAATCTTCGCTTTAACATTGTCAATGGTATCT 14939 Query 172011 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| || |||||||| |||||||||||||| || | | || | ||||||||||| Sbjct 14938 GACCTCTCAACTTCTAGGGTAATGGTTTTACCCGTAAGCGGCTTGACAAATATCTGCAT 14880 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || || | || ||||| | || | ||||| ||| |||||||| Sbjct 12636 ATTCCACCTCTCAGACGAAGCACCAAATGAAGGGTTGATTCTTTTAGAATGTTATAATCC 12577 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | ||||| || | || || | |||||||| ||||| || | |||||| ||||| || Sbjct 12576 GCTAAAGTCCGACCATCCTCGAGCTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGA 12517 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| || | || ||||| || || | ||| || Sbjct 12516 GGGATCCCTTCTTTATCTTGAATCTCCGCCTTAACATTGTCAATGGTGTATGAGCTCTCA 12457 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| |||||||||||||| || | || || | ||||||||||| Sbjct 12456 ACTTCTAGGGTAATGGTTTTACCGGTAAGCGTCTTGACAAATATCTGCAT 12407 Score = 87.8 bits (96), Expect = 3e-12 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 171872 AGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACC 171931 ||| | |||||| ||| || || || | ||||| ||| | || || | |||||| || Sbjct 12828 AGTTGACTCTTTCTGAATGTTGTAGTCCGCTAAAGTTCGACCATCCTCAAGTTGTTTTCC 12769 Query 171932 AGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 171991 ||||| ||||| ||||||||||| || || ||||| || ||||| || ||| ||| Sbjct 12768 GGCAAAGATTAACCTCTGTTGGTCCGGAGGGATTCC----TTGTCTTGAATCTTAGCTTT 12713 Query 171992 TACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 172051 ||||| || || | ||| || ||||| | ||| ||||||| || || | || Sbjct 12712 AACATTGTCAATTGTGTATGAACTCTCAACTTCCAAAGTTATGGTTTGGCCGGTAAGGGT 12653 Query 172052 TTTAATGAATATCTGCATT 172070 |||| || || |||||| Sbjct 12652 CTTAACAAAAATTTGCATT 12634 >seq24711 Length=27656 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || || || ||||| | ||||| |||||| || || ||||| Sbjct 4881 ATACCACCACGTAGACGCAACACCAAATGAAGAGTAGACTCTTTCTGGATGTTGTAATCA 4822 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| || |||| || | || ||||||||||| || |||||||| ||||| || Sbjct 4821 GCCAAAGTTCTGCCGTCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCCGGA 4762 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| || || || ||||| ||||| || || ||| Sbjct 4761 GGAATACCCTCTTTGTCTTGAATCTTGGCCTTCACATTGTCAATAGTGTCGGAGCTTTCA 4702 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||| || || || || || || |||| || |||||||| Sbjct 4701 ACTTCCAAAGTAATAGTCTTGCCCGTCAAGGTCTTAACAAAGATCTGCAT 4652 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| | | || | ||| | ||||| ||| || ||||| ||||| Sbjct 4653 ATACCACCACGAAGCCTGAGCACAAGATGAAGAGTAGACTCCTTCTGGATATTGTAATCC 4594 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || || | ||| || ||||| ||||| || ||||| || || || Sbjct 4593 GCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAAATCAACCTCTGCTGATCCGGA 4534 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || || ||||| || ||||| || || Sbjct 4533 GGAATACCTTCCTTATCTTGAATCTTGGCCTTAACATTGTCAATGGTATCAGAACTCTCC 4474 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || |||||||| ||||||||||| || || || | || |||||||| Sbjct 4473 ACCTCAAGAGTAATAGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 4424 >seq4225 Length=52512 Score = 116 bits (128), Expect = 7e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 || ||||| | ||||| || ||||| | || | ||||| || || ||||| | Sbjct 2735 CCTCCTCTTAATCGTAGAACCAAATGAAGCGTTGATTCTTTCTGGATGTTGTAATCAGCG 2794 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | |||| || ||||||||||| ||||| || || | || ||||| ||||| Sbjct 2795 AGTGTTCTTCCGTCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCCGGTGGA 2854 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 |||||||| || ||||| || || ||| ||||| || || || || ||||| || Sbjct 2855 ATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCGATTGTGTCCGAAGATTCAACC 2914 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT 172071 ||||| || || || || || |||| ||||| | ||| |||||||||| Sbjct 2915 TCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTT 2963 >seq18044 Length=6213 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | | | || ||||| | || | || || ||| || |||||| Sbjct 3075 ATACCACCTCTCAACCTGAGAACCAAATGCAGGGTTGATTCCTTCTGAATGTTGTAATCT 3134 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | ||| | || || | |||||||| ||||| || | ||||| ||||| || Sbjct 3135 GCAAGGGTTCGACCATCCTCGAGCTGTTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGA 3194 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || ||||| |||||| ||| ||||| || || ||||| || Sbjct 3195 GGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTGTCAATGGTGTCTGAGCTCTCG 3254 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| ||||| ||||||||||| | || || | ||||||||||| Sbjct 3255 ACTTCTAGGGTAATTGTTTTACCAGTAAGAGTCTTGACAAATATCTGCAT 3304 Score = 93.3 bits (102), Expect = 8e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||||||||||||||| | |||||| ||||| || || |||||||| |||||||| || Sbjct 3387 TGTTTACCAGCAAAAATCAGTCTCTGCTGGTCCGGAGGGATTCCTTCCTTATCTTGGATC 3446 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || || || || || || ||||| ||| || || || || ||||| || ||| Sbjct 3447 TTGGCCTTGACGTTGTCAATGGTGTCTGAACTTTCGACCTCAAGGGTTATGGTCTTGCCA 3506 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || | || |||| || |||||||| Sbjct 3507 GTAAGAGTCTTAACAAAGATCTGCAT 3532 >seq5576 Length=16168 Score = 113 bits (124), Expect = 8e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 171878 CTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAA 171937 |||||| |||||| ||||| | ||||| || | || || | || || || ||||| Sbjct 606 CTCTTTCTGAATATTGTAATCAGCTAAAGTCCGACCATCTTCTAGCTGCTTCCCGGCAAA 665 Query 171938 AATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 171997 |||| ||||||||||| ||||| || |||||||| |||||||| || || || || Sbjct 666 GATTAGCCTCTGTTGGTCCGGTGGAATCCCTTCTTTGTCTTGTATCTTTGCCTTCACGTT 725 Query 171998 AGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 172057 | || ||||| || ||||| || |||||||||||||| || || || ||||| | Sbjct 726 ATCAATCGTATCAGAGCTCTCTACCTCAAGAGTAATGGTTTTCCCTGTCAAAGTTTTGAC 785 Query 172058 GAATATCTGCAT 172069 || || ||||| Sbjct 786 AAAGATTTGCAT 797 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| |||| || | || | |||| ||| || ||||| ||||| Sbjct 796 ATCCCACCACGAAGACGTAGCACAAGGTGAAGTGTAGACTCCTTTTGGATATTGTAATCC 855 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || || | ||||||||||| || || | |||||||||||| || Sbjct 856 GCAAGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAGATCAGTCTCTGTTGGTCCGGA 915 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 | || ||||| || ||||| || || || || || || || ||||| || Sbjct 916 GTGATCCCTTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCA 975 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||||||||||| |||||||| ||||| | || || ||||| Sbjct 976 ACTTCTAAGGTAATGGTTTTGCCAGTTAAGGTTTTCACAAAGATTTGCAT 1025 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| ||||| | | || || | || || | |||||||| ||||| || | ||| Sbjct 1072 ATATTGTAATCCGCAAGAGTACGGCCATCCTCTAGCTGTTTACCGGCAAAGATAAGCCTC 1131 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 |||||||| || || ||||||||||||||||| || || || || || || || Sbjct 1132 TGTTGGTCCGGAGGGATTCCTTCTTTATCTTGAATCTTGGCCTTGACGTTGTCAATGGTG 1191 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| ||| || || || || |||||||| ||||||| ||||| | || || ||| Sbjct 1192 TCTGAGCTTTCGACCTCGAGTGTTATGGTTTTGCCAGTTAGGGTTTTCACAAAGATTTGC 1251 Query 172068 AT 172069 || Sbjct 1252 AT 1253 >seq14351 Length=15190 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 171872 AGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACC 171931 ||| | |||||| ||| || || || | ||| | || | || || | |||||||| Sbjct 4815 AGTTGACTCTTTCTGAATGTTGTAGTCAGCTAATGTCCGACCATCCTCGAGCTGTTTACC 4756 Query 171932 AGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 171991 ||| || |||| |||||||||||| ||||| || ||||| || || || || || || Sbjct 4755 AGCGAAGATTAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGAATCTTCGCCTT 4696 Query 171992 TACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 172051 |||||| || ||||| || ||| ||||| ||||| ||||||||||| || || || Sbjct 4695 CACATTATCAATCGTATCCGAGCTTTCGACTTCAAGAGTGATGGTTTTACCCGTCAAAGT 4636 Query 172052 TTTAATGAATATCTGCAT 172069 || | |||||||||| Sbjct 4635 CTTGACAGATATCTGCAT 4618 Score = 98.7 bits (108), Expect = 2e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| |||||||| | | || ||| | || || | |||||| |||| ||| || | || Sbjct 4572 AATGTTATAATCAGCAAGAGTTCGACCATCCTCAAGTTGTTTTCCAG-AAAGATGAGCCT 4514 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||| || || || ||||| || ||||| |||| | ||| ||||| || || Sbjct 4513 CTGTTGGTCCGGAGGGATCCCTTCCTTGTCTTGAATTT-AGCTTTAACATTGTCAATGGT 4455 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||||| || |||||||| |||||||||||||| || | ||| || | || |||| Sbjct 4454 GTCTGAGCTCTCGACTTCTAGGGTAATGGTTTTACCCGTGAGTGTCTTGACAAAGATCTA 4395 Query 172067 CAT 172069 ||| Sbjct 4394 CAT 4392 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||| | | | || ||||| | ||| | ||| || || || ||||| Sbjct 4393 ATACCTCCTCTCAACCTGAGAACCAAATGGAGAGTTGACTCCTTCTGGATGTTGTAATCC 4334 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || || || | || |||| || ||||||||||| || || || || ||||| || Sbjct 4333 GCTAGAGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAACCTTTGCTGGTCCGGA 4274 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| |||||||| || || || || ||| || || ||||| ||| Sbjct 4273 GGAATTCCTTCCTTATCTTGGATCTTGGCCTTGACGTTATCAATGGTGTCTGAACTTTCG 4214 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || ||||| |||||||| | || || | || |||||||| Sbjct 4213 ACCTCAAGGGTTATGGTCTTACCAGTAAGAGTCTTGACAAAGATCTGCAT 4164 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || || || | || | ||| || || || ||||| Sbjct 4165 ATACCACCTCTGAGACGAAGGACCAAGTGGAGTGTTGACTCCTTCTGGATGTTGTAATCA 4106 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || || | |||||||| ||||| || || ||||| ||||| || Sbjct 4105 GCAAGAGTACGGCCATCCTCGAGCTGTTTACCGGCAAAGATCAACCTCTGCTGGTCCGGA 4046 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| || ||| || ||| | || || || || ||| Sbjct 4045 GGGATTCCTTCTTTATCTTGAATCTTAGCCTTGACACTGTCAATTGTGTCGGAGCTTTCG 3986 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| ||||| || || || | || || | || || ||||| Sbjct 3985 ACCTCAAGAGTTATGGTCTTGCCTGTAAGAGTCTTTACAAAGATTTGCAT 3936 >seq8442 Length=60656 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | |||| || ||||| | ||| | || || |||||| |||||| Sbjct 43802 ATTCCACCTCTCAAACGTAGCACCAAATGCAGAGTTGATTCCTTCTGAATATTGTAATCT 43861 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | ||| |||| || | |||||||||||| || || | ||||||| ||| || Sbjct 43862 CCAAGGGTTCGACCGTCCTCGAGTTGTTTACCAGCGAAGATGAGCCTCTGTTCGTCTGGA 43921 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || || || | || || ||||| || Sbjct 43922 GGGATCCCTTCCTTATCTTGGATCTTCGCCTTGACGTCGTCAATGGTGTCTGAGCTCTCA 43981 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||||| ||||| ||||||||||| | |||||| | | ||| |||||| Sbjct 43982 ACTTCTAAGGTAATAGTTTTACCAGTGAGTGTTTTCACAACTATTTGCATT 44032 >seq7697 Length=17472 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | ||| | || || || || || | || || ||||| || ||| Sbjct 11102 ATACCACCTCTCAATCGGAGAACCAAGTGCAAGGTTGATTCCTTCTGGATATTGTAGTCT 11161 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| || | || || | ||||||||||| || || ||||| || || || || Sbjct 11162 GCCAAAGTACGGCCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGA 11221 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || ||| || |||||| ||||| || || || Sbjct 11222 GGAATACCTTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATAGTGTCAGAGCTCTCG 11281 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| ||||| || ||||| | |||||| | |||||| ||||| Sbjct 11282 ACCTCGAGAGTTATGGTCTTTCCAGTAAGTGTTTTCACGAATATTTGCAT 11331 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || || || | ||||| |||||| || || || ||| Sbjct 10418 ATACCACCTCTGAGACGAAGCACCAAGTGGAGAGTAGACTCTTTTTGGATGTTGTAGTCT 10477 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | || | || || | || || || ||||| || | |||||| || || ||| Sbjct 10478 GCGAGTGTGCGACCATCCTCTAGCTGCTTCCCGGCAAAGATAAGTCTCTGCTGATCCGGT 10537 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| ||||| ||||| || |||||| || || ||||| || Sbjct 10538 GGGATTCCCTCTTTGTCTTGGATTTTGGCCTTGACATTATCGATTGTGTCTGAGCTCTCC 10597 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| || ||||| ||||| | || || | || |||||||| Sbjct 10598 ACCTCCAAAGTGATTGTTTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 10647 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || | || | ||| | |||||| || || ||||| Sbjct 10646 ATACCACCACGAAGACGCAAGACAAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAATCC 10705 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || || | ||| |||||||| || || | ||||| || || || Sbjct 10706 GCAAGAGTTCTCCCATCTTCAAGTTGCTTACCAGCGAAGATAAGCCTCTGCTGATCTGGA 10765 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || ||| ||| ||||| ||||| || || || Sbjct 10766 GGAATACCTTCCTTGTCTTGGATCTTAGCTTTCACATTGTCAATAGTGTCGGAGCTCTCC 10825 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| || || || || || || | || |||||||| Sbjct 10826 ACCTCAAGAGTAATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 10875 Score = 89.7 bits (98), Expect = 9e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | ||| || | || ||||| | ||| | || || || || ||||| | Sbjct 9965 CCACCACGAAGACGAAGAACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCCGCA 10024 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | || | | | || || | ||| ||||| || || || | |||||| || || || || Sbjct 10025 AGAGTCCTTCCATCTTCAAGTTGCTTACCTGCGAAGATAAGTCTCTGCTGATCCGGAGGA 10084 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||| || || || || ||| || ||||| ||| || ||||| || || Sbjct 10085 ATCCCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCTATTGTGTCTGAGCTCTCCACC 10144 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||||||||| | || || | |||||||||||| Sbjct 10145 TCAAGGGTAATGGTTTTACCAGTGAGGGTCTTCACGAATATCTGCAT 10191 >seq28288 Length=9629 Score = 102 bits (112), Expect = 1e-16 Identities = 174/250 (70%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 171822 ATACTTTTTAGTTTCATAA--TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCT 171879 ||| ||| ||||| || || | ||||| | || || | || | || | ||| | || Sbjct 4867 ATAGTTTCTAGTT-CAGAAGCTTCCACCACGGAGACGGAGAACAAGGTGAAGAGTTGACT 4809 Query 171880 CTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAA 171939 |||| ||| || || || | ||| | || | || || | |||||||||||| || | Sbjct 4808 CTTTCTGAATGTTGTAGTCCGCTAATGTCCGACCATCCTCGAGTTGTTTACCAGCGAAGA 4749 Query 171940 TTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 171999 | | |||||| ||||| || || || ||||| || ||||| || || || || || Sbjct 4748 TGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGAATCTTCGCCTTGACGTTGT 4689 Query 172000 TTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGA 172059 ||||| ||||| || |||||||| ||||| ||||||||||| | ||||| | | Sbjct 4688 CAATAGTGTCTGAGTTCTCAACTTCTAGGGTAATAGTTTTACCAGTGAGGGTTTTCACAA 4629 Query 172060 ATATCTGCAT 172069 | |||||||| Sbjct 4628 AGATCTGCAT 4619 >seq16226 Length=39664 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | ||||| ||| || || || || ||| Sbjct 11591 ATACCACCACGAAGACGCAACACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCT 11650 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || || | || || || ||||| || || ||||| ||||| || Sbjct 11651 GCAAGAGTACGACCATCCTCAAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCCGGA 11710 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| || || ||| || || || || ||||| || Sbjct 11711 GGAATACCCTCTTTGTCTTGAATCTTGGCTTTCACGTTGTCGATGGTGTCTGAGCTCTCA 11770 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| |||||||| || || || | ||| |||||||| Sbjct 11771 ACCTCGAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 11820 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || || || || || | || | ||| || ||| || || || Sbjct 11135 ATACCACCACGAAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCG 11194 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | ||| | || | || || | || || ||||||||||| | | ||| ||||| || Sbjct 11195 GCTAAGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGA 11254 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || || || || || || ||||| ||||| || Sbjct 11255 GGGATACCTTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCTGAGCTCTCA 11314 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || |||||||| |||||||| || || || | ||| || ||||| Sbjct 11315 ACCTCAAGGGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 11364 >seq25505 Length=75187 Score = 98.7 bits (108), Expect = 2e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 |||| | || || ||||| | || || ||||| | ||| | |||||| |||||| | Sbjct 56742 TCATGGTTCCTCCCCTAAGCCTCAAGACCAAATGAAGAGTCGACTCTTTCTGAATATTGT 56683 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 | || | || | ||| | || || | ||||||||||||||| || ||||||||||| | Sbjct 56682 AGTCCGCTAGTGTTCGGCCATCTTCAAGTTGTTTACCAGCAAAGATCAATCTCTGTTGAT 56623 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATT 171983 | ||||||||||| ||||| || ||| || Sbjct 56622 CTGGTGGTATTCCCTCTTTGTCCTGTTTT 56594 >seq14839 Length=23228 Score = 96.9 bits (106), Expect = 6e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 || |||||||| || || | ||| |||||||| ||||| || |||| ||||| || || Sbjct 10173 TGCTTACCAGCGAAGATGAGTCTATGTTGGTCCGGTGGGATCTCTTCCTTATCATGAATC 10232 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 ||| |||||| ||| || || ||||| ||| || || ||||||||||||||||| Sbjct 10233 TTAGCTTTTACGTTATCGATTGTGTCTGAGCTTTCGACCTCAAGAGTAATGGTTTTACCG 10292 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || | || || | || |||||||| Sbjct 10293 GTAAGGGTCTTCACAAAAATCTGCAT 10318 >seq2313 Length=70781 Score = 96.9 bits (106), Expect = 6e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 |||| | |||||||| || | || || | ||| | ||||| |||||| || || | Sbjct 4685 TCATGGTTCCACCTCTGAGCCTCAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGT 4744 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 |||| | ||| | ||| | || || | ||| |||||||||||||| | |||||||| | Sbjct 4745 AATCAGCTAAGGTTCGACCATCTTCAAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGAT 4804 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGT 171980 |||||||||| |||||||| || ||| Sbjct 4805 CAGGTGGTATACCTTCTTTGTCCTGT 4830 >seq21545 Length=15879 Score = 84.2 bits (92), Expect = 4e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 |||| | ||||| ||||| | || || ||||| | ||| |||||| ||||| | Sbjct 15043 TCATGGTTCCACCCCTAAGCCTCAAGACCAAATGAAGAGTCAACTCTTTCTGGATATTGT 15102 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 | || | ||| | || |||| || | | | |||||||||| || ||| ||||||| | Sbjct 15103 AGTCCGCTAATGTTCCACCGTCTTCTAGCTCTATACCAGCAAAGATCAATATCTGTTGAT 15162 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||||||||||| ||||| || ||| || Sbjct 15163 CAGGTGGTATTCCCTCTTTGTCATGTTTT 15191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904810433895000