Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq23920 179 6e-39 seq18099 120 5e-21 >seq23920 Length=773 Score = 179 bits (198), Expect = 6e-39 Identities = 188/245 (77%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||| || || || || |||||| |||||| ||| ||| ||| Sbjct 397 TGTACTTGGTCACAGCCTTGGTGCCTTCAGACACAGCGTGCTTGGCCAATTCTCCGGGCA 456 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || || || || |||||||||||||| || | | ||| ||| | ||||| |||| Sbjct 457 GGAGGAGACGGACAGCGGTCTGGATCTCCCGAGAGGTGATGGTGGACCTCTTGTTGTAGT 516 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || |||| |||||||| | |||| | |||| |||||||| || |||||||| Sbjct 517 GGGCG--AGACGGCTGGCCTCGGCGGCGATCCTCTCGAAGATGTCGTTCACGAACGAGTT 574 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| ||||||| || ||||||||| || || || ||||| || Sbjct 575 CATGATGGACATGGCCTTGCTGGAGATACCGGTGTCGGGGTGGACTTGTTTCAGCACTTT 634 Query 1485708 GTAAA 1485712 ||||| Sbjct 635 GTAAA 639 >seq18099 Length=159039 Score = 120 bits (132), Expect = 5e-21 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 || |||| ||||| || || |||||| || || ||||| || ||||| ||| Sbjct 20307 GCTTCGGAGACTTGTACATCTGACATGAATCGTGAAGCGAGGTTTTCGAGTACGATTCCG 20248 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || |||||||| || ||||| ||||| ||||| |||||||| || ||||| |||| Sbjct 20247 TCAGATGCGGCGAAGAAAGCGAGTACGTGTTTGATGAAGTGACGTTCTCCGTCGTTGAGA 20188 Query 796270 GAGACCCAGTGGACCGT-GTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 |||||| || || ||| ||| ||||| || ||||||||||| ||||| || Sbjct 20187 TTTTCCCAGTC-ACGGTTGTCTTGTGAGAGATCGACTTCTTCGGCGGTCCAGAAGGATGC 20129 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||||| || |||||||| ||||| ||| || ||||| | || || |||| Sbjct 20128 TTCGGCTTTCTTGTACATTTCCCAGATCTGTGGGTAGTGAATCGGAAACA 20079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913185472007225